data_2F3Z # _model_server_result.job_id Cqx0cJ2hwLo_wbntzk9EoQ _model_server_result.datetime_utc '2024-12-26 18:58:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f3z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":168}' # _entry.id 2F3Z # _exptl.entry_id 2F3Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.89 _cell.angle_gamma 90 _cell.entry_id 2F3Z _cell.length_a 86.26 _cell.length_b 31.37 _cell.length_c 64.11 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F3Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 20 A ASP 20 1_555 F CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc2 A OD2 ASP 22 A ASP 22 1_555 F CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc3 A OD1 ASP 24 A ASP 24 1_555 F CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc4 A O THR 26 A THR 26 1_555 F CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc5 A OE1 GLU 31 A GLU 31 1_555 F CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc6 A OE2 GLU 31 A GLU 31 1_555 F CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc7 A OD1 ASP 56 A ASP 56 1_555 E CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc8 A OD1 ASP 58 A ASP 58 1_555 E CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc9 A OD1 ASN 60 A ASN 60 1_555 E CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc10 A O THR 62 A THR 62 1_555 E CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc11 A OE2 GLU 67 A GLU 67 1_555 E CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc12 A OE1 GLU 67 A GLU 67 1_555 E CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc13 A OD2 ASP 93 A ASP 93 1_555 D CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc14 A OD1 ASP 95 A ASP 95 1_555 D CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc15 A OD1 ASN 97 A ASN 97 1_555 D CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc16 A O TYR 99 A TYR 99 1_555 D CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc17 A OE1 GLU 104 A GLU 104 1_555 D CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc18 A OE2 GLU 104 A GLU 104 1_555 D CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc19 A OD1 ASP 129 A ASP 129 1_555 C CA CA . A CA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc20 A OD2 ASP 131 A ASP 131 1_555 C CA CA . A CA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc21 A OD2 ASP 133 A ASP 133 1_555 C CA CA . A CA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc22 A O GLN 135 A GLN 135 1_555 C CA CA . A CA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc23 A OE1 GLU 140 A GLU 140 1_555 C CA CA . A CA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc24 A OE2 GLU 140 A GLU 140 1_555 C CA CA . A CA 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc25 C CA CA . A CA 165 1_555 G O HOH . A HOH 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc26 D CA CA . A CA 166 1_555 G O HOH . A HOH 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc27 E CA CA . A CA 167 1_555 G O HOH . A HOH 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc28 E CA CA . A CA 167 1_555 G O HOH . A HOH 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc29 F CA CA . A CA 168 1_555 G O HOH . A HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2F3Z _atom_sites.fract_transf_matrix[1][1] 0.011593 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005627 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031878 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017338 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 165 165 CA CA . D 3 CA A 1 166 166 CA CA . E 3 CA A 1 167 167 CA CA . F 3 CA A 1 168 168 CA CA . G 4 HOH A 1 170 170 HOH HOH . G 4 HOH A 2 171 171 HOH HOH . G 4 HOH A 3 172 172 HOH HOH . G 4 HOH A 4 173 173 HOH HOH . G 4 HOH A 5 174 174 HOH HOH . G 4 HOH A 6 175 175 HOH HOH . G 4 HOH A 7 176 176 HOH HOH . G 4 HOH A 8 177 177 HOH HOH . G 4 HOH A 9 178 178 HOH HOH . G 4 HOH A 10 179 179 HOH HOH . G 4 HOH A 11 180 180 HOH HOH . G 4 HOH A 12 181 181 HOH HOH . G 4 HOH A 13 182 182 HOH HOH . G 4 HOH A 14 183 183 HOH HOH . G 4 HOH A 15 184 184 HOH HOH . G 4 HOH A 16 185 185 HOH HOH . G 4 HOH A 17 186 186 HOH HOH . G 4 HOH A 18 187 187 HOH HOH . G 4 HOH A 19 188 188 HOH HOH . G 4 HOH A 20 189 189 HOH HOH . G 4 HOH A 21 190 190 HOH HOH . G 4 HOH A 22 191 191 HOH HOH . G 4 HOH A 23 192 192 HOH HOH . G 4 HOH A 24 193 193 HOH HOH . G 4 HOH A 25 194 194 HOH HOH . G 4 HOH A 26 195 195 HOH HOH . G 4 HOH A 27 196 196 HOH HOH . G 4 HOH A 28 197 197 HOH HOH . G 4 HOH A 29 198 198 HOH HOH . G 4 HOH A 30 199 199 HOH HOH . G 4 HOH A 31 200 200 HOH HOH . G 4 HOH A 32 201 201 HOH HOH . G 4 HOH A 33 202 202 HOH HOH . G 4 HOH A 34 204 204 HOH HOH . G 4 HOH A 35 205 205 HOH HOH . G 4 HOH A 36 206 206 HOH HOH . G 4 HOH A 37 207 207 HOH HOH . G 4 HOH A 38 208 208 HOH HOH . G 4 HOH A 39 209 209 HOH HOH . G 4 HOH A 40 210 210 HOH HOH . G 4 HOH A 41 211 211 HOH HOH . G 4 HOH A 42 212 212 HOH HOH . G 4 HOH A 43 213 213 HOH HOH . G 4 HOH A 44 214 214 HOH HOH . G 4 HOH A 45 215 215 HOH HOH . G 4 HOH A 46 216 216 HOH HOH . G 4 HOH A 47 217 217 HOH HOH . G 4 HOH A 48 218 218 HOH HOH . G 4 HOH A 49 219 219 HOH HOH . G 4 HOH A 50 220 220 HOH HOH . G 4 HOH A 51 221 221 HOH HOH . G 4 HOH A 52 222 222 HOH HOH . G 4 HOH A 53 223 223 HOH HOH . G 4 HOH A 54 224 224 HOH HOH . G 4 HOH A 55 225 225 HOH HOH . G 4 HOH A 56 227 227 HOH HOH . G 4 HOH A 57 228 228 HOH HOH . G 4 HOH A 58 229 229 HOH HOH . G 4 HOH A 59 230 230 HOH HOH . G 4 HOH A 60 231 231 HOH HOH . G 4 HOH A 61 232 232 HOH HOH . G 4 HOH A 62 233 233 HOH HOH . G 4 HOH A 63 234 234 HOH HOH . G 4 HOH A 64 235 235 HOH HOH . G 4 HOH A 65 236 236 HOH HOH . G 4 HOH A 66 237 237 HOH HOH . G 4 HOH A 67 238 238 HOH HOH . G 4 HOH A 68 239 239 HOH HOH . G 4 HOH A 69 240 240 HOH HOH . G 4 HOH A 70 241 241 HOH HOH . G 4 HOH A 71 242 242 HOH HOH . G 4 HOH A 72 243 243 HOH HOH . G 4 HOH A 73 245 245 HOH HOH . G 4 HOH A 74 246 246 HOH HOH . G 4 HOH A 75 248 248 HOH HOH . G 4 HOH A 76 249 249 HOH HOH . G 4 HOH A 77 250 250 HOH HOH . G 4 HOH A 78 251 251 HOH HOH . G 4 HOH A 79 252 252 HOH HOH . G 4 HOH A 80 253 253 HOH HOH . G 4 HOH A 81 254 254 HOH HOH . G 4 HOH A 82 255 255 HOH HOH . G 4 HOH A 83 256 256 HOH HOH . G 4 HOH A 84 257 257 HOH HOH . G 4 HOH A 85 258 258 HOH HOH . G 4 HOH A 86 259 259 HOH HOH . G 4 HOH A 87 260 260 HOH HOH . G 4 HOH A 88 261 261 HOH HOH . G 4 HOH A 89 262 262 HOH HOH . G 4 HOH A 90 263 263 HOH HOH . G 4 HOH A 91 264 264 HOH HOH . G 4 HOH A 92 265 265 HOH HOH . G 4 HOH A 93 266 266 HOH HOH . G 4 HOH A 94 267 267 HOH HOH . G 4 HOH A 95 268 268 HOH HOH . G 4 HOH A 96 269 269 HOH HOH . G 4 HOH A 97 270 270 HOH HOH . G 4 HOH A 98 271 271 HOH HOH . G 4 HOH A 99 272 272 HOH HOH . G 4 HOH A 100 273 273 HOH HOH . G 4 HOH A 101 274 274 HOH HOH . G 4 HOH A 102 275 275 HOH HOH . G 4 HOH A 103 276 276 HOH HOH . G 4 HOH A 104 277 277 HOH HOH . G 4 HOH A 105 278 278 HOH HOH . G 4 HOH A 106 279 279 HOH HOH . G 4 HOH A 107 280 280 HOH HOH . G 4 HOH A 108 281 281 HOH HOH . G 4 HOH A 109 282 282 HOH HOH . G 4 HOH A 110 283 283 HOH HOH . G 4 HOH A 111 284 284 HOH HOH . G 4 HOH A 112 285 285 HOH HOH . G 4 HOH A 113 286 286 HOH HOH . G 4 HOH A 114 287 287 HOH HOH . G 4 HOH A 115 289 289 HOH HOH . G 4 HOH A 116 290 290 HOH HOH . G 4 HOH A 117 291 291 HOH HOH . G 4 HOH A 118 292 292 HOH HOH . G 4 HOH A 119 293 293 HOH HOH . G 4 HOH A 120 294 294 HOH HOH . G 4 HOH A 121 295 295 HOH HOH . G 4 HOH A 122 296 296 HOH HOH . G 4 HOH A 123 297 297 HOH HOH . G 4 HOH A 124 298 298 HOH HOH . G 4 HOH A 125 299 299 HOH HOH . G 4 HOH A 126 300 300 HOH HOH . G 4 HOH A 127 301 301 HOH HOH . G 4 HOH A 128 302 302 HOH HOH . G 4 HOH A 129 303 303 HOH HOH . G 4 HOH A 130 304 304 HOH HOH . G 4 HOH A 131 305 305 HOH HOH . G 4 HOH A 132 306 306 HOH HOH . G 4 HOH A 133 307 307 HOH HOH . G 4 HOH A 134 308 308 HOH HOH . G 4 HOH A 135 309 309 HOH HOH . G 4 HOH A 136 310 310 HOH HOH . G 4 HOH A 137 311 311 HOH HOH . G 4 HOH A 138 312 312 HOH HOH . G 4 HOH A 139 313 313 HOH HOH . G 4 HOH A 140 314 314 HOH HOH . G 4 HOH A 141 315 315 HOH HOH . G 4 HOH A 142 316 316 HOH HOH . G 4 HOH A 143 317 317 HOH HOH . G 4 HOH A 144 318 318 HOH HOH . G 4 HOH A 145 320 320 HOH HOH . G 4 HOH A 146 321 321 HOH HOH . G 4 HOH A 147 322 322 HOH HOH . G 4 HOH A 148 323 323 HOH HOH . G 4 HOH A 149 324 324 HOH HOH . G 4 HOH A 150 325 325 HOH HOH . G 4 HOH A 151 326 326 HOH HOH . G 4 HOH A 152 327 327 HOH HOH . G 4 HOH A 153 328 328 HOH HOH . G 4 HOH A 154 329 329 HOH HOH . G 4 HOH A 155 330 330 HOH HOH . G 4 HOH A 156 331 331 HOH HOH . G 4 HOH A 157 332 332 HOH HOH . G 4 HOH A 158 333 333 HOH HOH . G 4 HOH A 159 334 334 HOH HOH . G 4 HOH A 160 335 335 HOH HOH . G 4 HOH A 161 336 336 HOH HOH . G 4 HOH A 162 337 337 HOH HOH . G 4 HOH A 163 338 338 HOH HOH . G 4 HOH A 164 340 340 HOH HOH . G 4 HOH A 165 341 341 HOH HOH . G 4 HOH A 166 342 342 HOH HOH . H 4 HOH B 1 203 203 HOH HOH . H 4 HOH B 2 226 226 HOH HOH . H 4 HOH B 3 244 244 HOH HOH . H 4 HOH B 4 247 247 HOH HOH . H 4 HOH B 5 288 288 HOH HOH . H 4 HOH B 6 319 319 HOH HOH . H 4 HOH B 7 339 339 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -6.283 _atom_site.Cartn_y 7.181 _atom_site.Cartn_z 14.949 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 168 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #