data_2F4A # _model_server_result.job_id 5xs2jLbnPPWJ-D6HK5CkyA _model_server_result.datetime_utc '2024-12-04 20:27:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f4a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":205}' # _entry.id 2F4A # _exptl.entry_id 2F4A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 88.53 _cell.angle_beta 108.51 _cell.angle_gamma 111.92 _cell.entry_id 2F4A _cell.length_a 27.28 _cell.length_b 32.02 _cell.length_c 34.31 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F4A _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 243 n n N O2 NO3 sing 244 n n N O3 NO3 sing 245 n n # _atom_sites.entry_id 2F4A _atom_sites.fract_transf_matrix[1][1] 0.036657 _atom_sites.fract_transf_matrix[1][2] 0.014751 _atom_sites.fract_transf_matrix[1][3] 0.013907 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033664 _atom_sites.fract_transf_matrix[2][3] 0.003574 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030909 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 201 201 NO3 NO3 . C 2 NO3 A 1 203 203 NO3 NO3 . D 2 NO3 A 1 205 205 NO3 NO3 . E 2 NO3 A 1 206 206 NO3 NO3 . F 3 ACT A 1 300 300 ACT ACT . G 4 TOU A 1 221 221 TOU TOU . H 4 TOU A 1 222 222 TOU TOU . I 4 TOU A 1 223 223 TOU TOU . J 5 HOH A 1 301 301 HOH HOH . J 5 HOH A 2 302 302 HOH HOH . J 5 HOH A 3 303 303 HOH HOH . J 5 HOH A 4 304 304 HOH HOH . J 5 HOH A 5 305 305 HOH HOH . J 5 HOH A 6 306 306 HOH HOH . J 5 HOH A 7 307 307 HOH HOH . J 5 HOH A 8 308 308 HOH HOH . J 5 HOH A 9 309 309 HOH HOH . J 5 HOH A 10 310 310 HOH HOH . J 5 HOH A 11 311 311 HOH HOH . J 5 HOH A 12 312 312 HOH HOH . J 5 HOH A 13 313 313 HOH HOH . J 5 HOH A 14 314 314 HOH HOH . J 5 HOH A 15 315 315 HOH HOH . J 5 HOH A 16 316 316 HOH HOH . J 5 HOH A 17 317 317 HOH HOH . J 5 HOH A 18 318 318 HOH HOH . J 5 HOH A 19 319 319 HOH HOH . J 5 HOH A 20 320 320 HOH HOH . J 5 HOH A 21 321 321 HOH HOH . J 5 HOH A 22 322 322 HOH HOH . J 5 HOH A 23 323 323 HOH HOH . J 5 HOH A 24 324 324 HOH HOH . J 5 HOH A 25 325 325 HOH HOH . J 5 HOH A 26 326 326 HOH HOH . J 5 HOH A 27 327 327 HOH HOH . J 5 HOH A 28 328 328 HOH HOH . J 5 HOH A 29 329 329 HOH HOH . J 5 HOH A 30 330 330 HOH HOH . J 5 HOH A 31 331 331 HOH HOH . J 5 HOH A 32 332 332 HOH HOH . J 5 HOH A 33 333 333 HOH HOH . J 5 HOH A 34 334 334 HOH HOH . J 5 HOH A 35 335 335 HOH HOH . J 5 HOH A 36 336 336 HOH HOH . J 5 HOH A 37 337 337 HOH HOH . J 5 HOH A 38 338 338 HOH HOH . J 5 HOH A 39 339 339 HOH HOH . J 5 HOH A 40 340 340 HOH HOH . J 5 HOH A 41 341 341 HOH HOH . J 5 HOH A 42 342 342 HOH HOH . J 5 HOH A 43 343 343 HOH HOH . J 5 HOH A 44 344 344 HOH HOH . J 5 HOH A 45 345 345 HOH HOH . J 5 HOH A 46 346 346 HOH HOH . J 5 HOH A 47 347 347 HOH HOH . J 5 HOH A 48 348 348 HOH HOH . J 5 HOH A 49 349 349 HOH HOH . J 5 HOH A 50 350 350 HOH HOH . J 5 HOH A 51 351 351 HOH HOH . J 5 HOH A 52 352 352 HOH HOH . J 5 HOH A 53 353 353 HOH HOH . J 5 HOH A 54 354 354 HOH HOH . J 5 HOH A 55 355 355 HOH HOH . J 5 HOH A 56 356 356 HOH HOH . J 5 HOH A 57 357 357 HOH HOH . J 5 HOH A 58 358 358 HOH HOH . J 5 HOH A 59 359 359 HOH HOH . J 5 HOH A 60 360 360 HOH HOH . J 5 HOH A 61 361 361 HOH HOH . J 5 HOH A 62 362 362 HOH HOH . J 5 HOH A 63 363 363 HOH HOH . J 5 HOH A 64 364 364 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . D 2 -3.606 13.256 -7.925 1 30.71 ? N NO3 205 A 1 HETATM 2 O O1 NO3 . . . D 2 -3.862 14.34 -8.479 1 38.87 ? O1 NO3 205 A 1 HETATM 3 O O2 NO3 . . . D 2 -4.382 12.292 -7.995 1 39.16 ? O2 NO3 205 A 1 HETATM 4 O O3 NO3 . . . D 2 -2.553 13.137 -7.291 1 29.35 ? O3 NO3 205 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #