data_2F4F # _model_server_result.job_id ZbLaHKt-2GO_8gveuFhoDA _model_server_result.datetime_utc '2024-11-05 01:21:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f4f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1501}' # _entry.id 2F4F # _exptl.entry_id 2F4F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 128.73 _cell.angle_gamma 90 _cell.entry_id 2F4F _cell.length_a 91.93 _cell.length_b 67.924 _cell.length_c 65.332 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F4F _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 55 A GLU 55 1_555 C MN MN . A MN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc2 A ND1 HIS 62 A HIS 62 1_555 C MN MN . A MN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc3 C MN MN . A MN 1501 1_555 E O HOH . A HOH 1513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc4 C MN MN . A MN 1501 1_555 E O HOH . A HOH 1519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc5 C MN MN . A MN 1501 1_555 E O HOH . A HOH 1521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc6 C MN MN . A MN 1501 1_555 E O HOH . A HOH 1540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc7 B OE1 GLU 55 B GLU 55 1_555 D MN MN . B MN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc8 B ND1 HIS 62 B HIS 62 1_555 D MN MN . B MN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc9 D MN MN . B MN 1502 1_555 F O HOH . B HOH 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc10 D MN MN . B MN 1502 1_555 F O HOH . B HOH 1506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc11 D MN MN . B MN 1502 1_555 F O HOH . B HOH 1511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc12 D MN MN . B MN 1502 1_555 F O HOH . B HOH 1531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2F4F _atom_sites.fract_transf_matrix[1][1] 0.010878 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008724 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 1501 1501 MN MN . D 2 MN B 1 1502 1502 MN MN . E 3 HOH A 1 1502 2 HOH TIP . E 3 HOH A 2 1503 3 HOH TIP . E 3 HOH A 3 1504 4 HOH TIP . E 3 HOH A 4 1505 5 HOH TIP . E 3 HOH A 5 1506 6 HOH TIP . E 3 HOH A 6 1507 11 HOH TIP . E 3 HOH A 7 1508 15 HOH TIP . E 3 HOH A 8 1509 16 HOH TIP . E 3 HOH A 9 1510 17 HOH TIP . E 3 HOH A 10 1511 20 HOH TIP . E 3 HOH A 11 1512 22 HOH TIP . E 3 HOH A 12 1513 23 HOH TIP . E 3 HOH A 13 1514 24 HOH TIP . E 3 HOH A 14 1515 25 HOH TIP . E 3 HOH A 15 1516 26 HOH TIP . E 3 HOH A 16 1517 28 HOH TIP . E 3 HOH A 17 1518 31 HOH TIP . E 3 HOH A 18 1519 32 HOH TIP . E 3 HOH A 19 1520 33 HOH TIP . E 3 HOH A 20 1521 35 HOH TIP . E 3 HOH A 21 1522 36 HOH TIP . E 3 HOH A 22 1523 37 HOH TIP . E 3 HOH A 23 1524 38 HOH TIP . E 3 HOH A 24 1525 39 HOH TIP . E 3 HOH A 25 1526 40 HOH TIP . E 3 HOH A 26 1527 41 HOH TIP . E 3 HOH A 27 1528 42 HOH TIP . E 3 HOH A 28 1529 47 HOH TIP . E 3 HOH A 29 1530 50 HOH TIP . E 3 HOH A 30 1531 51 HOH TIP . E 3 HOH A 31 1532 52 HOH TIP . E 3 HOH A 32 1533 53 HOH TIP . E 3 HOH A 33 1534 55 HOH TIP . E 3 HOH A 34 1535 56 HOH TIP . E 3 HOH A 35 1536 58 HOH TIP . E 3 HOH A 36 1537 62 HOH TIP . E 3 HOH A 37 1538 64 HOH TIP . E 3 HOH A 38 1539 65 HOH TIP . E 3 HOH A 39 1540 67 HOH TIP . E 3 HOH A 40 1541 70 HOH TIP . E 3 HOH A 41 1542 72 HOH TIP . E 3 HOH A 42 1543 75 HOH TIP . E 3 HOH A 43 1544 76 HOH TIP . E 3 HOH A 44 1545 80 HOH TIP . E 3 HOH A 45 1546 82 HOH TIP . E 3 HOH A 46 1547 85 HOH TIP . E 3 HOH A 47 1548 86 HOH TIP . E 3 HOH A 48 1549 87 HOH TIP . E 3 HOH A 49 1550 88 HOH TIP . E 3 HOH A 50 1551 92 HOH TIP . E 3 HOH A 51 1552 94 HOH TIP . E 3 HOH A 52 1553 101 HOH TIP . E 3 HOH A 53 1554 102 HOH TIP . E 3 HOH A 54 1555 103 HOH TIP . E 3 HOH A 55 1556 106 HOH TIP . E 3 HOH A 56 1557 108 HOH TIP . E 3 HOH A 57 1558 110 HOH TIP . E 3 HOH A 58 1559 111 HOH TIP . E 3 HOH A 59 1560 113 HOH TIP . E 3 HOH A 60 1561 114 HOH TIP . E 3 HOH A 61 1562 115 HOH TIP . E 3 HOH A 62 1563 118 HOH TIP . E 3 HOH A 63 1564 120 HOH TIP . E 3 HOH A 64 1565 121 HOH TIP . E 3 HOH A 65 1566 123 HOH TIP . E 3 HOH A 66 1567 126 HOH TIP . E 3 HOH A 67 1568 128 HOH TIP . E 3 HOH A 68 1569 130 HOH TIP . E 3 HOH A 69 1570 132 HOH TIP . E 3 HOH A 70 1571 134 HOH TIP . E 3 HOH A 71 1572 135 HOH TIP . E 3 HOH A 72 1573 138 HOH TIP . E 3 HOH A 73 1574 146 HOH TIP . E 3 HOH A 74 1575 147 HOH TIP . E 3 HOH A 75 1576 149 HOH TIP . E 3 HOH A 76 1577 152 HOH TIP . E 3 HOH A 77 1578 153 HOH TIP . E 3 HOH A 78 1579 154 HOH TIP . F 3 HOH B 1 1503 1 HOH TIP . F 3 HOH B 2 1504 7 HOH TIP . F 3 HOH B 3 1505 8 HOH TIP . F 3 HOH B 4 1506 9 HOH TIP . F 3 HOH B 5 1507 10 HOH TIP . F 3 HOH B 6 1508 12 HOH TIP . F 3 HOH B 7 1509 13 HOH TIP . F 3 HOH B 8 1510 14 HOH TIP . F 3 HOH B 9 1511 18 HOH TIP . F 3 HOH B 10 1512 19 HOH TIP . F 3 HOH B 11 1513 21 HOH TIP . F 3 HOH B 12 1514 27 HOH TIP . F 3 HOH B 13 1515 29 HOH TIP . F 3 HOH B 14 1516 30 HOH TIP . F 3 HOH B 15 1517 34 HOH TIP . F 3 HOH B 16 1518 43 HOH TIP . F 3 HOH B 17 1519 44 HOH TIP . F 3 HOH B 18 1520 45 HOH TIP . F 3 HOH B 19 1521 46 HOH TIP . F 3 HOH B 20 1522 48 HOH TIP . F 3 HOH B 21 1523 49 HOH TIP . F 3 HOH B 22 1524 54 HOH TIP . F 3 HOH B 23 1525 57 HOH TIP . F 3 HOH B 24 1526 59 HOH TIP . F 3 HOH B 25 1527 60 HOH TIP . F 3 HOH B 26 1528 61 HOH TIP . F 3 HOH B 27 1529 63 HOH TIP . F 3 HOH B 28 1530 66 HOH TIP . F 3 HOH B 29 1531 68 HOH TIP . F 3 HOH B 30 1532 69 HOH TIP . F 3 HOH B 31 1533 71 HOH TIP . F 3 HOH B 32 1534 73 HOH TIP . F 3 HOH B 33 1535 74 HOH TIP . F 3 HOH B 34 1536 77 HOH TIP . F 3 HOH B 35 1537 78 HOH TIP . F 3 HOH B 36 1538 79 HOH TIP . F 3 HOH B 37 1539 81 HOH TIP . F 3 HOH B 38 1540 83 HOH TIP . F 3 HOH B 39 1541 84 HOH TIP . F 3 HOH B 40 1542 89 HOH TIP . F 3 HOH B 41 1543 90 HOH TIP . F 3 HOH B 42 1544 91 HOH TIP . F 3 HOH B 43 1545 93 HOH TIP . F 3 HOH B 44 1546 95 HOH TIP . F 3 HOH B 45 1547 96 HOH TIP . F 3 HOH B 46 1548 97 HOH TIP . F 3 HOH B 47 1549 98 HOH TIP . F 3 HOH B 48 1550 99 HOH TIP . F 3 HOH B 49 1551 100 HOH TIP . F 3 HOH B 50 1552 104 HOH TIP . F 3 HOH B 51 1553 105 HOH TIP . F 3 HOH B 52 1554 107 HOH TIP . F 3 HOH B 53 1555 109 HOH TIP . F 3 HOH B 54 1556 112 HOH TIP . F 3 HOH B 55 1557 116 HOH TIP . F 3 HOH B 56 1558 117 HOH TIP . F 3 HOH B 57 1559 119 HOH TIP . F 3 HOH B 58 1560 122 HOH TIP . F 3 HOH B 59 1561 124 HOH TIP . F 3 HOH B 60 1562 125 HOH TIP . F 3 HOH B 61 1563 127 HOH TIP . F 3 HOH B 62 1564 129 HOH TIP . F 3 HOH B 63 1565 131 HOH TIP . F 3 HOH B 64 1566 133 HOH TIP . F 3 HOH B 65 1567 136 HOH TIP . F 3 HOH B 66 1568 137 HOH TIP . F 3 HOH B 67 1569 139 HOH TIP . F 3 HOH B 68 1570 140 HOH TIP . F 3 HOH B 69 1571 141 HOH TIP . F 3 HOH B 70 1572 142 HOH TIP . F 3 HOH B 71 1573 143 HOH TIP . F 3 HOH B 72 1574 144 HOH TIP . F 3 HOH B 73 1575 145 HOH TIP . F 3 HOH B 74 1576 148 HOH TIP . F 3 HOH B 75 1577 150 HOH TIP . F 3 HOH B 76 1578 151 HOH TIP . F 3 HOH B 77 1579 155 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 63.568 _atom_site.Cartn_y 4.087 _atom_site.Cartn_z 8.034 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 1501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #