data_2F5D
#
_model_server_result.job_id            EIoYEaGYLSrBk1uti2_xfA 
_model_server_result.datetime_utc      '2024-10-10 08:23:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2f5d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2151}' 
#
_entry.id    2F5D 
#
_exptl.entry_id    2F5D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.61 
_cell.angle_gamma         90 
_cell.entry_id            2F5D 
_cell.length_a            50.73 
_cell.length_b            46.4 
_cell.length_c            75.8 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2F5D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 8 A ASP 8 1_555 D MN MN . A MN 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc2 A OE1 GLU 11 A GLU 11 1_555 C MN MN . A MN 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc3 A OE2 GLU 11 A GLU 11 1_555 C MN MN . A MN 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc4 A ND1 HIS 77 A HIS 77 1_555 C MN MN . A MN 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc5 A OE2 GLU 99 A GLU 99 1_555 C MN MN . A MN 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc6 A O GLU 99 A GLU 99 1_555 D MN MN . A MN 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? 
metalc ? metalc7 A OE1 GLU 99 A GLU 99 1_555 D MN MN . A MN 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc8 A OE1 GLU 102 A GLU 102 1_555 C MN MN . A MN 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc9 A OE2 GLU 102 A GLU 102 1_555 C MN MN . A MN 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc10 A OE2 GLU 102 A GLU 102 1_555 D MN MN . A MN 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc11 A NE2 HIS 103 A HIS 103 1_555 D MN MN . A MN 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc12 D MN MN . A MN 1151 1_555 G O HOH . A HOH 1168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc13 B OD2 ASP 8 B ASP 8 1_555 F MN MN . B MN 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? 
metalc ? metalc14 B OE2 GLU 11 B GLU 11 1_555 E MN MN . B MN 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc15 B OE1 GLU 11 B GLU 11 1_555 E MN MN . B MN 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? 
metalc ? metalc16 B ND1 HIS 77 B HIS 77 1_555 E MN MN . B MN 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc17 B OE2 GLU 99 B GLU 99 1_555 E MN MN . B MN 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc18 B O GLU 99 B GLU 99 1_555 F MN MN . B MN 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc19 B OE1 GLU 99 B GLU 99 1_555 F MN MN . B MN 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc20 B OE1 GLU 102 B GLU 102 1_555 E MN MN . B MN 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc21 B OE2 GLU 102 B GLU 102 1_555 E MN MN . B MN 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc22 B OE2 GLU 102 B GLU 102 1_555 F MN MN . B MN 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc23 B NE2 HIS 103 B HIS 103 1_555 F MN MN . B MN 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc24 E MN MN . B MN 2150 1_555 H O HOH . B HOH 2180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? 
metalc ? metalc25 F MN MN . B MN 2151 1_555 H O HOH . B HOH 2171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2F5D 
_atom_sites.fract_transf_matrix[1][1]    0.019712 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001589 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021552 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013235 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 1150 150 MN MN . 
D 2 MN A 1 1151 151 MN MN . 
E 2 MN B 1 2150 150 MN MN . 
F 2 MN B 1 2151 151 MN MN . 
G 3 HOH A 1 1152 1 HOH HOH . 
G 3 HOH A 2 1153 5 HOH HOH . 
G 3 HOH A 3 1154 7 HOH HOH . 
G 3 HOH A 4 1155 9 HOH HOH . 
G 3 HOH A 5 1156 11 HOH HOH . 
G 3 HOH A 6 1157 16 HOH HOH . 
G 3 HOH A 7 1158 18 HOH HOH . 
G 3 HOH A 8 1159 19 HOH HOH . 
G 3 HOH A 9 1160 24 HOH HOH . 
G 3 HOH A 10 1161 27 HOH HOH . 
G 3 HOH A 11 1162 35 HOH HOH . 
G 3 HOH A 12 1163 36 HOH HOH . 
G 3 HOH A 13 1164 37 HOH HOH . 
G 3 HOH A 14 1165 38 HOH HOH . 
G 3 HOH A 15 1166 41 HOH HOH . 
G 3 HOH A 16 1167 42 HOH HOH . 
G 3 HOH A 17 1168 44 HOH HOH . 
G 3 HOH A 18 1169 46 HOH HOH . 
G 3 HOH A 19 1170 54 HOH HOH . 
G 3 HOH A 20 1171 55 HOH HOH . 
G 3 HOH A 21 1172 57 HOH HOH . 
G 3 HOH A 22 1173 59 HOH HOH . 
G 3 HOH A 23 1174 66 HOH HOH . 
G 3 HOH A 24 1175 67 HOH HOH . 
G 3 HOH A 25 1176 72 HOH HOH . 
G 3 HOH A 26 1177 73 HOH HOH . 
G 3 HOH A 27 1178 74 HOH HOH . 
G 3 HOH A 28 1179 75 HOH HOH . 
G 3 HOH A 29 1180 76 HOH HOH . 
G 3 HOH A 30 1181 81 HOH HOH . 
G 3 HOH A 31 1182 83 HOH HOH . 
G 3 HOH A 32 1183 84 HOH HOH . 
G 3 HOH A 33 1184 85 HOH HOH . 
H 3 HOH B 1 2152 2 HOH HOH . 
H 3 HOH B 2 2153 3 HOH HOH . 
H 3 HOH B 3 2154 4 HOH HOH . 
H 3 HOH B 4 2155 6 HOH HOH . 
H 3 HOH B 5 2156 8 HOH HOH . 
H 3 HOH B 6 2157 10 HOH HOH . 
H 3 HOH B 7 2158 12 HOH HOH . 
H 3 HOH B 8 2159 13 HOH HOH . 
H 3 HOH B 9 2160 14 HOH HOH . 
H 3 HOH B 10 2161 15 HOH HOH . 
H 3 HOH B 11 2162 17 HOH HOH . 
H 3 HOH B 12 2163 20 HOH HOH . 
H 3 HOH B 13 2164 21 HOH HOH . 
H 3 HOH B 14 2165 22 HOH HOH . 
H 3 HOH B 15 2166 23 HOH HOH . 
H 3 HOH B 16 2167 25 HOH HOH . 
H 3 HOH B 17 2168 26 HOH HOH . 
H 3 HOH B 18 2169 28 HOH HOH . 
H 3 HOH B 19 2170 29 HOH HOH . 
H 3 HOH B 20 2171 30 HOH HOH . 
H 3 HOH B 21 2172 31 HOH HOH . 
H 3 HOH B 22 2173 32 HOH HOH . 
H 3 HOH B 23 2174 33 HOH HOH . 
H 3 HOH B 24 2175 34 HOH HOH . 
H 3 HOH B 25 2176 39 HOH HOH . 
H 3 HOH B 26 2177 40 HOH HOH . 
H 3 HOH B 27 2178 43 HOH HOH . 
H 3 HOH B 28 2179 45 HOH HOH . 
H 3 HOH B 29 2180 47 HOH HOH . 
H 3 HOH B 30 2181 48 HOH HOH . 
H 3 HOH B 31 2182 49 HOH HOH . 
H 3 HOH B 32 2183 50 HOH HOH . 
H 3 HOH B 33 2184 51 HOH HOH . 
H 3 HOH B 34 2185 52 HOH HOH . 
H 3 HOH B 35 2186 53 HOH HOH . 
H 3 HOH B 36 2187 56 HOH HOH . 
H 3 HOH B 37 2188 58 HOH HOH . 
H 3 HOH B 38 2189 60 HOH HOH . 
H 3 HOH B 39 2190 61 HOH HOH . 
H 3 HOH B 40 2191 62 HOH HOH . 
H 3 HOH B 41 2192 63 HOH HOH . 
H 3 HOH B 42 2193 64 HOH HOH . 
H 3 HOH B 43 2194 65 HOH HOH . 
H 3 HOH B 44 2195 68 HOH HOH . 
H 3 HOH B 45 2196 69 HOH HOH . 
H 3 HOH B 46 2197 70 HOH HOH . 
H 3 HOH B 47 2198 71 HOH HOH . 
H 3 HOH B 48 2199 77 HOH HOH . 
H 3 HOH B 49 2200 78 HOH HOH . 
H 3 HOH B 50 2201 79 HOH HOH . 
H 3 HOH B 51 2202 80 HOH HOH . 
H 3 HOH B 52 2203 82 HOH HOH . 
H 3 HOH B 53 2204 86 HOH HOH . 
H 3 HOH B 54 2205 87 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               54.004 
_atom_site.Cartn_y               22.835 
_atom_site.Cartn_z               11.366 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        33.55 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           2151 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#