data_2F5O # _model_server_result.job_id OOz6KOys4Km1yvndca3vSA _model_server_result.datetime_utc '2025-03-06 06:13:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f5o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 2F5O # _exptl.entry_id 2F5O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2F5O _cell.length_a 45.543 _cell.length_b 93.253 _cell.length_c 105.257 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F5O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SG CYS 249 A CYS 249 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc2 C SG CYS 252 A CYS 252 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 C SG CYS 269 A CYS 269 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc4 C SG CYS 272 A CYS 272 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? hydrog WATSON-CRICK hydrog1 A N1 DG 2 B DG 2 1_555 B N3 DC 16 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 2 B DG 2 1_555 B O2 DC 16 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 2 B DG 2 1_555 B N4 DC 16 C DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DC PAIR' hydrog4 A N1 DG 3 B DG 3 1_555 B N3 DC 15 C DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N3 DT 4 B DT 4 1_555 B N1 DA 14 C DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O4 DT 4 B DT 4 1_555 B N6 DA 14 C DA 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 5 B DA 5 1_555 B N3 DT 13 C DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 5 B DA 5 1_555 B O4 DT 13 C DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 6 B DG 6 1_555 B N3 DC 12 C DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 6 B DG 6 1_555 B O2 DC 12 C DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 6 B DG 6 1_555 B N4 DC 12 C DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 7 B DA 7 1_555 B N3 DT 11 C DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 7 B DA 7 1_555 B O4 DT 11 C DT 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DT 8 B DT 8 1_555 B N1 DA 10 C DA 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O4 DT 8 B DT 8 1_555 B N6 DA 10 C DA 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N3 DC 9 B DC 9 1_555 B N1 DG 9 C DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N4 DC 9 B DC 9 1_555 B O6 DG 9 C DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O2 DC 9 B DC 9 1_555 B N2 DG 9 C DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DC 10 B DC 10 1_555 B N1 DG 8 C DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N4 DC 10 B DC 10 1_555 B O6 DG 8 C DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O2 DC 10 B DC 10 1_555 B N2 DG 8 C DG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DG 11 B DG 11 1_555 B N3 DC 7 C DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N2 DG 11 B DG 11 1_555 B O2 DC 7 C DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O6 DG 11 B DG 11 1_555 B N4 DC 7 C DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N1 DG 12 B DG 12 1_555 B N3 DC 6 C DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N2 DG 12 B DG 12 1_555 B O2 DC 6 C DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A O6 DG 12 B DG 12 1_555 B N4 DC 6 C DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N1 DA 13 B DA 13 1_555 B N3 DT 5 C DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N6 DA 13 B DA 13 1_555 B O4 DT 5 C DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog30 A N4 DC 14 B DC 14 1_555 B O6 DG 4 C DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2F5O _atom_sites.fract_transf_matrix[1][1] 0.021957 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 300 300 ZN ZN . E 5 GOL A 1 301 1 GOL GOL . F 6 HOH B 1 84 84 HOH HOH . G 6 HOH C 1 16 7 HOH HOH . G 6 HOH C 2 17 36 HOH HOH . G 6 HOH C 3 18 40 HOH HOH . G 6 HOH C 4 19 72 HOH HOH . G 6 HOH C 5 20 75 HOH HOH . G 6 HOH C 6 21 93 HOH HOH . G 6 HOH C 7 22 94 HOH HOH . G 6 HOH C 8 23 103 HOH HOH . G 6 HOH C 9 24 113 HOH HOH . G 6 HOH C 10 25 116 HOH HOH . G 6 HOH C 11 26 118 HOH HOH . G 6 HOH C 12 27 122 HOH HOH . G 6 HOH C 13 28 129 HOH HOH . G 6 HOH C 14 29 131 HOH HOH . H 6 HOH A 1 302 1 HOH HOH . H 6 HOH A 2 303 2 HOH HOH . H 6 HOH A 3 304 3 HOH HOH . H 6 HOH A 4 305 4 HOH HOH . H 6 HOH A 5 306 5 HOH HOH . H 6 HOH A 6 307 6 HOH HOH . H 6 HOH A 7 308 8 HOH HOH . H 6 HOH A 8 309 9 HOH HOH . H 6 HOH A 9 310 10 HOH HOH . H 6 HOH A 10 311 11 HOH HOH . H 6 HOH A 11 312 12 HOH HOH . H 6 HOH A 12 313 13 HOH HOH . H 6 HOH A 13 314 14 HOH HOH . H 6 HOH A 14 315 15 HOH HOH . H 6 HOH A 15 316 16 HOH HOH . H 6 HOH A 16 317 17 HOH HOH . H 6 HOH A 17 318 18 HOH HOH . H 6 HOH A 18 319 19 HOH HOH . H 6 HOH A 19 320 20 HOH HOH . H 6 HOH A 20 321 21 HOH HOH . H 6 HOH A 21 322 22 HOH HOH . H 6 HOH A 22 323 23 HOH HOH . H 6 HOH A 23 324 24 HOH HOH . H 6 HOH A 24 325 25 HOH HOH . H 6 HOH A 25 326 26 HOH HOH . H 6 HOH A 26 327 27 HOH HOH . H 6 HOH A 27 328 28 HOH HOH . H 6 HOH A 28 329 29 HOH HOH . H 6 HOH A 29 330 30 HOH HOH . H 6 HOH A 30 331 31 HOH HOH . H 6 HOH A 31 332 32 HOH HOH . H 6 HOH A 32 333 33 HOH HOH . H 6 HOH A 33 334 34 HOH HOH . H 6 HOH A 34 335 35 HOH HOH . H 6 HOH A 35 336 37 HOH HOH . H 6 HOH A 36 337 38 HOH HOH . H 6 HOH A 37 338 39 HOH HOH . H 6 HOH A 38 339 41 HOH HOH . H 6 HOH A 39 340 42 HOH HOH . H 6 HOH A 40 341 43 HOH HOH . H 6 HOH A 41 342 44 HOH HOH . H 6 HOH A 42 343 45 HOH HOH . H 6 HOH A 43 344 46 HOH HOH . H 6 HOH A 44 345 47 HOH HOH . H 6 HOH A 45 346 48 HOH HOH . H 6 HOH A 46 347 49 HOH HOH . H 6 HOH A 47 348 50 HOH HOH . H 6 HOH A 48 349 51 HOH HOH . H 6 HOH A 49 350 52 HOH HOH . H 6 HOH A 50 351 53 HOH HOH . H 6 HOH A 51 352 54 HOH HOH . H 6 HOH A 52 353 55 HOH HOH . H 6 HOH A 53 354 56 HOH HOH . H 6 HOH A 54 355 57 HOH HOH . H 6 HOH A 55 356 58 HOH HOH . H 6 HOH A 56 357 59 HOH HOH . H 6 HOH A 57 358 60 HOH HOH . H 6 HOH A 58 359 61 HOH HOH . H 6 HOH A 59 360 62 HOH HOH . H 6 HOH A 60 361 63 HOH HOH . H 6 HOH A 61 362 64 HOH HOH . H 6 HOH A 62 363 65 HOH HOH . H 6 HOH A 63 364 66 HOH HOH . H 6 HOH A 64 365 67 HOH HOH . H 6 HOH A 65 366 68 HOH HOH . H 6 HOH A 66 367 69 HOH HOH . H 6 HOH A 67 368 70 HOH HOH . H 6 HOH A 68 369 71 HOH HOH . H 6 HOH A 69 370 73 HOH HOH . H 6 HOH A 70 371 74 HOH HOH . H 6 HOH A 71 372 76 HOH HOH . H 6 HOH A 72 373 77 HOH HOH . H 6 HOH A 73 374 78 HOH HOH . H 6 HOH A 74 375 79 HOH HOH . H 6 HOH A 75 376 80 HOH HOH . H 6 HOH A 76 377 81 HOH HOH . H 6 HOH A 77 378 82 HOH HOH . H 6 HOH A 78 379 83 HOH HOH . H 6 HOH A 79 380 85 HOH HOH . H 6 HOH A 80 381 86 HOH HOH . H 6 HOH A 81 382 87 HOH HOH . H 6 HOH A 82 383 88 HOH HOH . H 6 HOH A 83 384 89 HOH HOH . H 6 HOH A 84 385 90 HOH HOH . H 6 HOH A 85 386 91 HOH HOH . H 6 HOH A 86 387 92 HOH HOH . H 6 HOH A 87 388 95 HOH HOH . H 6 HOH A 88 389 96 HOH HOH . H 6 HOH A 89 390 97 HOH HOH . H 6 HOH A 90 391 98 HOH HOH . H 6 HOH A 91 392 99 HOH HOH . H 6 HOH A 92 393 100 HOH HOH . H 6 HOH A 93 394 101 HOH HOH . H 6 HOH A 94 395 102 HOH HOH . H 6 HOH A 95 396 104 HOH HOH . H 6 HOH A 96 397 105 HOH HOH . H 6 HOH A 97 398 106 HOH HOH . H 6 HOH A 98 399 107 HOH HOH . H 6 HOH A 99 400 108 HOH HOH . H 6 HOH A 100 401 109 HOH HOH . H 6 HOH A 101 402 110 HOH HOH . H 6 HOH A 102 403 111 HOH HOH . H 6 HOH A 103 404 112 HOH HOH . H 6 HOH A 104 405 114 HOH HOH . H 6 HOH A 105 406 115 HOH HOH . H 6 HOH A 106 407 117 HOH HOH . H 6 HOH A 107 408 119 HOH HOH . H 6 HOH A 108 409 120 HOH HOH . H 6 HOH A 109 410 121 HOH HOH . H 6 HOH A 110 411 123 HOH HOH . H 6 HOH A 111 412 124 HOH HOH . H 6 HOH A 112 413 125 HOH HOH . H 6 HOH A 113 414 126 HOH HOH . H 6 HOH A 114 415 127 HOH HOH . H 6 HOH A 115 416 128 HOH HOH . H 6 HOH A 116 417 130 HOH HOH . H 6 HOH A 117 418 132 HOH HOH . H 6 HOH A 118 419 133 HOH HOH . H 6 HOH A 119 420 134 HOH HOH . H 6 HOH A 120 421 135 HOH HOH . H 6 HOH A 121 422 136 HOH HOH . H 6 HOH A 122 423 137 HOH HOH . H 6 HOH A 123 424 138 HOH HOH . H 6 HOH A 124 425 139 HOH HOH . H 6 HOH A 125 426 140 HOH HOH . H 6 HOH A 126 427 141 HOH HOH . H 6 HOH A 127 428 142 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -16.185 _atom_site.Cartn_y 31.159 _atom_site.Cartn_z 37.66 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #