data_2F5P # _model_server_result.job_id YZLZ0rt2_tMRRPO9MgyOyw _model_server_result.datetime_utc '2025-03-06 06:17:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f5p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 2F5P # _exptl.entry_id 2F5P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2F5P _cell.length_a 45.372 _cell.length_b 91.982 _cell.length_c 106.125 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F5P _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SG CYS 249 A CYS 249 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc2 C SG CYS 252 A CYS 252 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc3 C SG CYS 269 A CYS 269 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc4 C SG CYS 272 A CYS 272 1_555 D ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? hydrog 'DG-DC PAIR' hydrog1 A N1 DG 2 C DG 3 1_555 B N3 DC 16 D DC 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N1 DG 3 C DG 4 1_555 B N3 DC 15 D DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N2 DG 3 C DG 4 1_555 B O2 DC 15 D DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A O6 DG 3 C DG 4 1_555 B N4 DC 15 D DC 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N3 DT 4 C DT 5 1_555 B N1 DA 14 D DA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O4 DT 4 C DT 5 1_555 B N6 DA 14 D DA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DA 5 C DA 6 1_555 B N3 DT 13 D DT 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N6 DA 5 C DA 6 1_555 B O4 DT 13 D DT 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 6 C DG 7 1_555 B N3 DC 12 D DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 6 C DG 7 1_555 B O2 DC 12 D DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 6 C DG 7 1_555 B N4 DC 12 D DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 7 C DA 8 1_555 B N3 DT 11 D DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 7 C DA 8 1_555 B O4 DT 11 D DT 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 8 C DC 9 1_555 B N1 DG 10 D DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 8 C DC 9 1_555 B O6 DG 10 D DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 8 C DC 9 1_555 B N2 DG 10 D DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DT 9 C DT 10 1_555 B N1 DA 9 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O4 DT 9 C DT 10 1_555 B N6 DA 9 D DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DT 10 C DT 11 1_555 B N1 DA 8 D DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O4 DT 10 C DT 11 1_555 B N6 DA 8 D DA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DG 11 C DG 12 1_555 B N3 DC 7 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N2 DG 11 C DG 12 1_555 B O2 DC 7 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O6 DG 11 C DG 12 1_555 B N4 DC 7 D DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N1 DG 12 C DG 13 1_555 B N3 DC 6 D DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N2 DG 12 C DG 13 1_555 B O2 DC 6 D DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O6 DG 12 C DG 13 1_555 B N4 DC 6 D DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N1 DA 13 C DA 14 1_555 B N3 DT 5 D DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N6 DA 13 C DA 14 1_555 B O4 DT 5 D DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2F5P _atom_sites.fract_transf_matrix[1][1] 0.02204 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 300 300 ZN ZN . E 5 HOH C 1 31 31 HOH HOH . E 5 HOH C 2 35 35 HOH HOH . E 5 HOH C 3 47 47 HOH HOH . E 5 HOH C 4 90 90 HOH HOH . E 5 HOH C 5 93 93 HOH HOH . E 5 HOH C 6 97 97 HOH HOH . E 5 HOH C 7 98 98 HOH HOH . E 5 HOH C 8 113 113 HOH HOH . E 5 HOH C 9 119 119 HOH HOH . E 5 HOH C 10 124 124 HOH HOH . E 5 HOH C 11 128 128 HOH HOH . E 5 HOH C 12 130 130 HOH HOH . E 5 HOH C 13 132 132 HOH HOH . E 5 HOH C 14 137 137 HOH HOH . E 5 HOH C 15 138 138 HOH HOH . E 5 HOH C 16 148 148 HOH HOH . F 5 HOH D 1 15 11 HOH HOH . F 5 HOH D 2 16 14 HOH HOH . F 5 HOH D 3 17 18 HOH HOH . F 5 HOH D 4 18 36 HOH HOH . F 5 HOH D 5 19 45 HOH HOH . F 5 HOH D 6 20 72 HOH HOH . F 5 HOH D 7 21 82 HOH HOH . F 5 HOH D 8 22 107 HOH HOH . F 5 HOH D 9 23 123 HOH HOH . F 5 HOH D 10 24 139 HOH HOH . F 5 HOH D 11 25 166 HOH HOH . G 5 HOH A 1 301 1 HOH HOH . G 5 HOH A 2 302 2 HOH HOH . G 5 HOH A 3 303 3 HOH HOH . G 5 HOH A 4 304 4 HOH HOH . G 5 HOH A 5 305 5 HOH HOH . G 5 HOH A 6 306 6 HOH HOH . G 5 HOH A 7 307 7 HOH HOH . G 5 HOH A 8 308 8 HOH HOH . G 5 HOH A 9 309 9 HOH HOH . G 5 HOH A 10 310 10 HOH HOH . G 5 HOH A 11 311 12 HOH HOH . G 5 HOH A 12 312 13 HOH HOH . G 5 HOH A 13 313 15 HOH HOH . G 5 HOH A 14 314 16 HOH HOH . G 5 HOH A 15 315 17 HOH HOH . G 5 HOH A 16 316 19 HOH HOH . G 5 HOH A 17 317 20 HOH HOH . G 5 HOH A 18 318 21 HOH HOH . G 5 HOH A 19 319 22 HOH HOH . G 5 HOH A 20 320 23 HOH HOH . G 5 HOH A 21 321 24 HOH HOH . G 5 HOH A 22 322 25 HOH HOH . G 5 HOH A 23 323 26 HOH HOH . G 5 HOH A 24 324 27 HOH HOH . G 5 HOH A 25 325 28 HOH HOH . G 5 HOH A 26 326 29 HOH HOH . G 5 HOH A 27 327 30 HOH HOH . G 5 HOH A 28 328 32 HOH HOH . G 5 HOH A 29 329 33 HOH HOH . G 5 HOH A 30 330 34 HOH HOH . G 5 HOH A 31 331 37 HOH HOH . G 5 HOH A 32 332 38 HOH HOH . G 5 HOH A 33 333 39 HOH HOH . G 5 HOH A 34 334 40 HOH HOH . G 5 HOH A 35 335 42 HOH HOH . G 5 HOH A 36 336 43 HOH HOH . G 5 HOH A 37 337 44 HOH HOH . G 5 HOH A 38 338 46 HOH HOH . G 5 HOH A 39 339 48 HOH HOH . G 5 HOH A 40 340 49 HOH HOH . G 5 HOH A 41 341 50 HOH HOH . G 5 HOH A 42 342 51 HOH HOH . G 5 HOH A 43 343 52 HOH HOH . G 5 HOH A 44 344 53 HOH HOH . G 5 HOH A 45 345 54 HOH HOH . G 5 HOH A 46 346 55 HOH HOH . G 5 HOH A 47 347 56 HOH HOH . G 5 HOH A 48 348 57 HOH HOH . G 5 HOH A 49 349 58 HOH HOH . G 5 HOH A 50 350 59 HOH HOH . G 5 HOH A 51 351 60 HOH HOH . G 5 HOH A 52 352 61 HOH HOH . G 5 HOH A 53 353 62 HOH HOH . G 5 HOH A 54 354 63 HOH HOH . G 5 HOH A 55 355 64 HOH HOH . G 5 HOH A 56 356 65 HOH HOH . G 5 HOH A 57 357 66 HOH HOH . G 5 HOH A 58 358 67 HOH HOH . G 5 HOH A 59 359 68 HOH HOH . G 5 HOH A 60 360 69 HOH HOH . G 5 HOH A 61 361 70 HOH HOH . G 5 HOH A 62 362 71 HOH HOH . G 5 HOH A 63 363 73 HOH HOH . G 5 HOH A 64 364 74 HOH HOH . G 5 HOH A 65 365 75 HOH HOH . G 5 HOH A 66 366 76 HOH HOH . G 5 HOH A 67 367 77 HOH HOH . G 5 HOH A 68 368 78 HOH HOH . G 5 HOH A 69 369 79 HOH HOH . G 5 HOH A 70 370 80 HOH HOH . G 5 HOH A 71 371 81 HOH HOH . G 5 HOH A 72 372 83 HOH HOH . G 5 HOH A 73 373 84 HOH HOH . G 5 HOH A 74 374 85 HOH HOH . G 5 HOH A 75 375 86 HOH HOH . G 5 HOH A 76 376 87 HOH HOH . G 5 HOH A 77 377 88 HOH HOH . G 5 HOH A 78 378 89 HOH HOH . G 5 HOH A 79 379 91 HOH HOH . G 5 HOH A 80 380 92 HOH HOH . G 5 HOH A 81 381 94 HOH HOH . G 5 HOH A 82 382 95 HOH HOH . G 5 HOH A 83 383 96 HOH HOH . G 5 HOH A 84 384 99 HOH HOH . G 5 HOH A 85 385 100 HOH HOH . G 5 HOH A 86 386 101 HOH HOH . G 5 HOH A 87 387 102 HOH HOH . G 5 HOH A 88 388 103 HOH HOH . G 5 HOH A 89 389 104 HOH HOH . G 5 HOH A 90 390 105 HOH HOH . G 5 HOH A 91 391 106 HOH HOH . G 5 HOH A 92 392 108 HOH HOH . G 5 HOH A 93 393 109 HOH HOH . G 5 HOH A 94 394 110 HOH HOH . G 5 HOH A 95 395 111 HOH HOH . G 5 HOH A 96 396 112 HOH HOH . G 5 HOH A 97 397 114 HOH HOH . G 5 HOH A 98 398 115 HOH HOH . G 5 HOH A 99 399 116 HOH HOH . G 5 HOH A 100 400 117 HOH HOH . G 5 HOH A 101 401 118 HOH HOH . G 5 HOH A 102 402 120 HOH HOH . G 5 HOH A 103 403 121 HOH HOH . G 5 HOH A 104 404 122 HOH HOH . G 5 HOH A 105 405 125 HOH HOH . G 5 HOH A 106 406 126 HOH HOH . G 5 HOH A 107 407 127 HOH HOH . G 5 HOH A 108 408 129 HOH HOH . G 5 HOH A 109 409 131 HOH HOH . G 5 HOH A 110 410 133 HOH HOH . G 5 HOH A 111 411 134 HOH HOH . G 5 HOH A 112 412 135 HOH HOH . G 5 HOH A 113 413 136 HOH HOH . G 5 HOH A 114 414 140 HOH HOH . G 5 HOH A 115 415 141 HOH HOH . G 5 HOH A 116 416 142 HOH HOH . G 5 HOH A 117 417 143 HOH HOH . G 5 HOH A 118 418 144 HOH HOH . G 5 HOH A 119 419 145 HOH HOH . G 5 HOH A 120 420 146 HOH HOH . G 5 HOH A 121 421 147 HOH HOH . G 5 HOH A 122 422 149 HOH HOH . G 5 HOH A 123 423 150 HOH HOH . G 5 HOH A 124 424 151 HOH HOH . G 5 HOH A 125 425 152 HOH HOH . G 5 HOH A 126 426 153 HOH HOH . G 5 HOH A 127 427 154 HOH HOH . G 5 HOH A 128 428 155 HOH HOH . G 5 HOH A 129 429 159 HOH HOH . G 5 HOH A 130 430 160 HOH HOH . G 5 HOH A 131 431 161 HOH HOH . G 5 HOH A 132 432 162 HOH HOH . G 5 HOH A 133 433 163 HOH HOH . G 5 HOH A 134 434 164 HOH HOH . G 5 HOH A 135 435 165 HOH HOH . G 5 HOH A 136 436 167 HOH HOH . G 5 HOH A 137 437 168 HOH HOH . G 5 HOH A 138 438 169 HOH HOH . G 5 HOH A 139 439 170 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -15.672 _atom_site.Cartn_y 30.882 _atom_site.Cartn_z 37.892 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #