data_2F5T
#
_model_server_result.job_id            DiWExRy8qUXX2detPFcTVg 
_model_server_result.datetime_utc      '2025-03-04 22:06:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2f5t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":344}' 
#
_entry.id    2F5T 
#
_exptl.entry_id    2F5T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2F5T 
_cell.length_a            56.857 
_cell.length_b            56.857 
_cell.length_c            132.482 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2F5T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 85.2855 49.239606 88.321333 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   2 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   GLC 
_pdbx_entity_branch_link.comp_id_2                   GLC 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B GLC 1 A 1 GLC X 343 MAL 
2 n B GLC 2 A 2 GLC X 343 MAL 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            O4 
_struct_conn.ptnr1_label_comp_id            GLC 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             GLC 
_struct_conn.ptnr1_auth_seq_id              1 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C1 
_struct_conn.ptnr2_label_comp_id            GLC 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             GLC 
_struct_conn.ptnr2_auth_seq_id              2 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.39 
_struct_conn.pdbx_value_order               sing 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 184 n y 
N1 C5 IMD sing 185 n y 
N1 HN1 IMD sing 186 n n 
C2 N3 IMD doub 187 n y 
C2 H2 IMD sing 188 n n 
N3 C4 IMD sing 189 n y 
N3 HN3 IMD sing 190 n n 
C4 C5 IMD doub 191 n y 
C4 H4 IMD sing 192 n n 
C5 H5 IMD sing 193 n n 
#
_atom_sites.entry_id                     2F5T 
_atom_sites.fract_transf_matrix[1][1]    0.01759 
_atom_sites.fract_transf_matrix[1][2]    0.01015 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02031 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00755 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 IMD X 1 344 344 IMD IMD . 
D 4 HOH X 1 345 345 HOH HOH . 
D 4 HOH X 2 346 346 HOH HOH . 
D 4 HOH X 3 347 347 HOH HOH . 
D 4 HOH X 4 348 348 HOH HOH . 
D 4 HOH X 5 349 349 HOH HOH . 
D 4 HOH X 6 350 350 HOH HOH . 
D 4 HOH X 7 351 351 HOH HOH . 
D 4 HOH X 8 352 352 HOH HOH . 
D 4 HOH X 9 353 353 HOH HOH . 
D 4 HOH X 10 354 354 HOH HOH . 
D 4 HOH X 11 355 355 HOH HOH . 
D 4 HOH X 12 356 356 HOH HOH . 
D 4 HOH X 13 357 357 HOH HOH . 
D 4 HOH X 14 358 358 HOH HOH . 
D 4 HOH X 15 359 359 HOH HOH . 
D 4 HOH X 16 360 360 HOH HOH . 
D 4 HOH X 17 361 361 HOH HOH . 
D 4 HOH X 18 362 362 HOH HOH . 
D 4 HOH X 19 363 363 HOH HOH . 
D 4 HOH X 20 364 364 HOH HOH . 
D 4 HOH X 21 365 365 HOH HOH . 
D 4 HOH X 22 366 366 HOH HOH . 
D 4 HOH X 23 367 367 HOH HOH . 
D 4 HOH X 24 368 368 HOH HOH . 
D 4 HOH X 25 369 369 HOH HOH . 
D 4 HOH X 26 370 370 HOH HOH . 
D 4 HOH X 27 371 371 HOH HOH . 
D 4 HOH X 28 372 372 HOH HOH . 
D 4 HOH X 29 373 373 HOH HOH . 
D 4 HOH X 30 374 374 HOH HOH . 
D 4 HOH X 31 375 375 HOH HOH . 
D 4 HOH X 32 376 376 HOH HOH . 
D 4 HOH X 33 377 377 HOH HOH . 
D 4 HOH X 34 378 378 HOH HOH . 
D 4 HOH X 35 379 379 HOH HOH . 
D 4 HOH X 36 380 380 HOH HOH . 
D 4 HOH X 37 381 381 HOH HOH . 
D 4 HOH X 38 382 382 HOH HOH . 
D 4 HOH X 39 383 383 HOH HOH . 
D 4 HOH X 40 384 384 HOH HOH . 
D 4 HOH X 41 385 385 HOH HOH . 
D 4 HOH X 42 386 386 HOH HOH . 
D 4 HOH X 43 387 387 HOH HOH . 
D 4 HOH X 44 388 388 HOH HOH . 
D 4 HOH X 45 389 389 HOH HOH . 
D 4 HOH X 46 390 390 HOH HOH . 
D 4 HOH X 47 391 391 HOH HOH . 
D 4 HOH X 48 392 392 HOH HOH . 
D 4 HOH X 49 393 393 HOH HOH . 
D 4 HOH X 50 394 394 HOH HOH . 
D 4 HOH X 51 395 395 HOH HOH . 
D 4 HOH X 52 396 396 HOH HOH . 
D 4 HOH X 53 397 397 HOH HOH . 
D 4 HOH X 54 398 398 HOH HOH . 
D 4 HOH X 55 399 399 HOH HOH . 
D 4 HOH X 56 400 400 HOH HOH . 
D 4 HOH X 57 401 401 HOH HOH . 
D 4 HOH X 58 402 402 HOH HOH . 
D 4 HOH X 59 403 403 HOH HOH . 
D 4 HOH X 60 404 404 HOH HOH . 
D 4 HOH X 61 405 405 HOH HOH . 
D 4 HOH X 62 406 406 HOH HOH . 
D 4 HOH X 63 407 407 HOH HOH . 
D 4 HOH X 64 408 408 HOH HOH . 
D 4 HOH X 65 409 409 HOH HOH . 
D 4 HOH X 66 410 410 HOH HOH . 
D 4 HOH X 67 411 411 HOH HOH . 
D 4 HOH X 68 412 412 HOH HOH . 
D 4 HOH X 69 413 413 HOH HOH . 
D 4 HOH X 70 414 414 HOH HOH . 
D 4 HOH X 71 415 415 HOH HOH . 
D 4 HOH X 72 416 416 HOH HOH . 
D 4 HOH X 73 417 417 HOH HOH . 
D 4 HOH X 74 418 418 HOH HOH . 
D 4 HOH X 75 419 419 HOH HOH . 
D 4 HOH X 76 420 420 HOH HOH . 
D 4 HOH X 77 421 421 HOH HOH . 
D 4 HOH X 78 422 422 HOH HOH . 
D 4 HOH X 79 423 423 HOH HOH . 
D 4 HOH X 80 424 424 HOH HOH . 
D 4 HOH X 81 425 425 HOH HOH . 
D 4 HOH X 82 426 426 HOH HOH . 
D 4 HOH X 83 427 427 HOH HOH . 
D 4 HOH X 84 428 428 HOH HOH . 
D 4 HOH X 85 429 429 HOH HOH . 
D 4 HOH X 86 430 430 HOH HOH . 
D 4 HOH X 87 431 431 HOH HOH . 
D 4 HOH X 88 433 433 HOH HOH . 
D 4 HOH X 89 434 434 HOH HOH . 
D 4 HOH X 90 435 435 HOH HOH . 
D 4 HOH X 91 436 436 HOH HOH . 
D 4 HOH X 92 437 437 HOH HOH . 
D 4 HOH X 93 438 438 HOH HOH . 
D 4 HOH X 94 439 439 HOH HOH . 
D 4 HOH X 95 440 440 HOH HOH . 
D 4 HOH X 96 441 441 HOH HOH . 
D 4 HOH X 97 442 442 HOH HOH . 
D 4 HOH X 98 443 443 HOH HOH . 
D 4 HOH X 99 444 444 HOH HOH . 
D 4 HOH X 100 445 445 HOH HOH . 
D 4 HOH X 101 446 446 HOH HOH . 
D 4 HOH X 102 447 447 HOH HOH . 
D 4 HOH X 103 448 448 HOH HOH . 
D 4 HOH X 104 449 449 HOH HOH . 
D 4 HOH X 105 450 450 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . C 3 33.59 36.618 19.838 1 22.03 ? N1 IMD 344 X 1 
HETATM 2 C C2 IMD . . . C 3 33.75 37.926 20.211 1 22.44 ? C2 IMD 344 X 1 
HETATM 3 N N3 IMD . . . C 3 33.382 38.745 19.176 1 21.89 ? N3 IMD 344 X 1 
HETATM 4 C C4 IMD . . . C 3 32.976 37.934 18.175 1 20.64 ? C4 IMD 344 X 1 
HETATM 5 C C5 IMD . . . C 3 33.087 36.602 18.573 1 20.63 ? C5 IMD 344 X 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#