data_2F6Q
#
_model_server_result.job_id            8N_HsujaepD-sD0CUIY2rQ 
_model_server_result.datetime_utc      '2025-02-27 13:52:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2f6q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    2F6Q 
#
_exptl.entry_id    2F6Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2F6Q 
_cell.length_a            46.931 
_cell.length_b            123.196 
_cell.length_c            128.133 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2F6Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 22 A SER -1 1_555 A N MSE 23 A MSE 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale2 A C MSE 23 A MSE 0 1_555 A N GLY 24 A GLY 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.735 ? 
covale ? covale3 A C ILE 39 A ILE 123 1_555 A N MSE 40 A MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C MSE 40 A MSE 124 1_555 A N PHE 41 A PHE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale5 A C GLU 53 A GLU 137 1_555 A N MSE 54 A MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale6 A C MSE 54 A MSE 138 1_555 A N TYR 55 A TYR 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale7 A C ILE 58 A ILE 142 1_555 A N MSE 59 A MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C MSE 59 A MSE 143 1_555 A N ARG 60 A ARG 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale9 A C ILE 176 A ILE 260 1_555 A N MSE 177 A MSE 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 A C MSE 177 A MSE 261 1_555 A N SER 178 A SER 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale11 A C GLU 184 A GLU 268 1_555 A N MSE 185 A MSE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale12 A C MSE 185 A MSE 269 1_555 A N LEU 186 A LEU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale13 B C ILE 39 B ILE 123 1_555 B N MSE 40 B MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale14 B C MSE 40 B MSE 124 1_555 B N PHE 41 B PHE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale15 B C GLU 53 B GLU 137 1_555 B N MSE 54 B MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale16 B C MSE 54 B MSE 138 1_555 B N TYR 55 B TYR 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale17 B C ILE 58 B ILE 142 1_555 B N MSE 59 B MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale18 B C MSE 59 B MSE 143 1_555 B N ARG 60 B ARG 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale19 B C ILE 176 B ILE 260 1_555 B N MSE 177 B MSE 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 B C MSE 177 B MSE 261 1_555 B N SER 178 B SER 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale21 B C GLU 184 B GLU 268 1_555 B N MSE 185 B MSE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale22 B C MSE 185 B MSE 269 1_555 B N LEU 186 B LEU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale23 C C ILE 39 C ILE 123 1_555 C N MSE 40 C MSE 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale24 C C MSE 40 C MSE 124 1_555 C N PHE 41 C PHE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale25 C C GLU 53 C GLU 137 1_555 C N MSE 54 C MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale26 C C MSE 54 C MSE 138 1_555 C N TYR 55 C TYR 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale27 C C ILE 58 C ILE 142 1_555 C N MSE 59 C MSE 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale28 C C MSE 59 C MSE 143 1_555 C N ARG 60 C ARG 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale29 C C ILE 176 C ILE 260 1_555 C N MSE 177 C MSE 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale30 C C MSE 177 C MSE 261 1_555 C N SER 178 C SER 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale31 C C GLU 184 C GLU 268 1_555 C N MSE 185 C MSE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale32 C C MSE 185 C MSE 269 1_555 C N LEU 186 C LEU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 353 n n 
C C2 TRS sing 354 n n 
C C3 TRS sing 355 n n 
C N TRS sing 356 n n 
C1 O1 TRS sing 357 n n 
C1 H11 TRS sing 358 n n 
C1 H12 TRS sing 359 n n 
C2 O2 TRS sing 360 n n 
C2 H21 TRS sing 361 n n 
C2 H22 TRS sing 362 n n 
C3 O3 TRS sing 363 n n 
C3 H31 TRS sing 364 n n 
C3 H32 TRS sing 365 n n 
N HN1 TRS sing 366 n n 
N HN2 TRS sing 367 n n 
N HN3 TRS sing 368 n n 
O1 HO1 TRS sing 369 n n 
O2 HO2 TRS sing 370 n n 
O3 HO3 TRS sing 371 n n 
#
_atom_sites.entry_id                     2F6Q 
_atom_sites.fract_transf_matrix[1][1]    0.021308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007804 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 TRS B 1 1 1 TRS TRS . 
E 3 HOH A 1 365 9 HOH HOH . 
E 3 HOH A 2 366 12 HOH HOH . 
E 3 HOH A 3 367 20 HOH HOH . 
E 3 HOH A 4 368 22 HOH HOH . 
E 3 HOH A 5 369 38 HOH HOH . 
E 3 HOH A 6 370 39 HOH HOH . 
E 3 HOH A 7 371 41 HOH HOH . 
E 3 HOH A 8 372 45 HOH HOH . 
E 3 HOH A 9 373 46 HOH HOH . 
E 3 HOH A 10 374 53 HOH HOH . 
E 3 HOH A 11 375 63 HOH HOH . 
E 3 HOH A 12 376 71 HOH HOH . 
E 3 HOH A 13 377 75 HOH HOH . 
E 3 HOH A 14 378 77 HOH HOH . 
E 3 HOH A 15 379 97 HOH HOH . 
E 3 HOH A 16 380 101 HOH HOH . 
E 3 HOH A 17 381 108 HOH HOH . 
E 3 HOH A 18 382 113 HOH HOH . 
E 3 HOH A 19 383 117 HOH HOH . 
E 3 HOH A 20 384 119 HOH HOH . 
E 3 HOH A 21 385 120 HOH HOH . 
E 3 HOH A 22 386 136 HOH HOH . 
E 3 HOH A 23 387 137 HOH HOH . 
E 3 HOH A 24 388 138 HOH HOH . 
E 3 HOH A 25 389 141 HOH HOH . 
E 3 HOH A 26 390 152 HOH HOH . 
E 3 HOH A 27 391 156 HOH HOH . 
E 3 HOH A 28 392 158 HOH HOH . 
E 3 HOH A 29 393 160 HOH HOH . 
E 3 HOH A 30 394 162 HOH HOH . 
E 3 HOH A 31 395 164 HOH HOH . 
E 3 HOH A 32 396 166 HOH HOH . 
E 3 HOH A 33 397 170 HOH HOH . 
E 3 HOH A 34 398 176 HOH HOH . 
E 3 HOH A 35 399 191 HOH HOH . 
E 3 HOH A 36 400 199 HOH HOH . 
E 3 HOH A 37 401 223 HOH HOH . 
E 3 HOH A 38 402 234 HOH HOH . 
E 3 HOH A 39 403 238 HOH HOH . 
E 3 HOH A 40 404 251 HOH HOH . 
E 3 HOH A 41 405 255 HOH HOH . 
E 3 HOH A 42 406 256 HOH HOH . 
E 3 HOH A 43 407 257 HOH HOH . 
E 3 HOH A 44 408 259 HOH HOH . 
E 3 HOH A 45 409 260 HOH HOH . 
E 3 HOH A 46 410 268 HOH HOH . 
E 3 HOH A 47 411 269 HOH HOH . 
F 3 HOH B 1 365 3 HOH HOH . 
F 3 HOH B 2 366 7 HOH HOH . 
F 3 HOH B 3 367 16 HOH HOH . 
F 3 HOH B 4 368 19 HOH HOH . 
F 3 HOH B 5 369 29 HOH HOH . 
F 3 HOH B 6 370 30 HOH HOH . 
F 3 HOH B 7 371 32 HOH HOH . 
F 3 HOH B 8 372 35 HOH HOH . 
F 3 HOH B 9 373 40 HOH HOH . 
F 3 HOH B 10 374 43 HOH HOH . 
F 3 HOH B 11 375 44 HOH HOH . 
F 3 HOH B 12 376 47 HOH HOH . 
F 3 HOH B 13 377 52 HOH HOH . 
F 3 HOH B 14 378 69 HOH HOH . 
F 3 HOH B 15 379 70 HOH HOH . 
F 3 HOH B 16 380 79 HOH HOH . 
F 3 HOH B 17 381 84 HOH HOH . 
F 3 HOH B 18 382 85 HOH HOH . 
F 3 HOH B 19 383 89 HOH HOH . 
F 3 HOH B 20 384 90 HOH HOH . 
F 3 HOH B 21 385 91 HOH HOH . 
F 3 HOH B 22 386 106 HOH HOH . 
F 3 HOH B 23 387 110 HOH HOH . 
F 3 HOH B 24 388 114 HOH HOH . 
F 3 HOH B 25 389 122 HOH HOH . 
F 3 HOH B 26 390 132 HOH HOH . 
F 3 HOH B 27 391 145 HOH HOH . 
F 3 HOH B 28 392 148 HOH HOH . 
F 3 HOH B 29 393 154 HOH HOH . 
F 3 HOH B 30 394 159 HOH HOH . 
F 3 HOH B 31 395 161 HOH HOH . 
F 3 HOH B 32 396 168 HOH HOH . 
F 3 HOH B 33 397 169 HOH HOH . 
F 3 HOH B 34 398 189 HOH HOH . 
F 3 HOH B 35 399 194 HOH HOH . 
F 3 HOH B 36 400 201 HOH HOH . 
F 3 HOH B 37 401 210 HOH HOH . 
F 3 HOH B 38 402 217 HOH HOH . 
F 3 HOH B 39 403 230 HOH HOH . 
F 3 HOH B 40 404 240 HOH HOH . 
F 3 HOH B 41 405 242 HOH HOH . 
F 3 HOH B 42 406 243 HOH HOH . 
F 3 HOH B 43 407 249 HOH HOH . 
F 3 HOH B 44 408 250 HOH HOH . 
F 3 HOH B 45 409 252 HOH HOH . 
F 3 HOH B 46 410 254 HOH HOH . 
F 3 HOH B 47 411 261 HOH HOH . 
F 3 HOH B 48 412 262 HOH HOH . 
F 3 HOH B 49 413 263 HOH HOH . 
F 3 HOH B 50 414 265 HOH HOH . 
G 3 HOH C 1 365 10 HOH HOH . 
G 3 HOH C 2 366 21 HOH HOH . 
G 3 HOH C 3 367 23 HOH HOH . 
G 3 HOH C 4 368 25 HOH HOH . 
G 3 HOH C 5 369 26 HOH HOH . 
G 3 HOH C 6 370 51 HOH HOH . 
G 3 HOH C 7 371 54 HOH HOH . 
G 3 HOH C 8 372 55 HOH HOH . 
G 3 HOH C 9 373 56 HOH HOH . 
G 3 HOH C 10 374 58 HOH HOH . 
G 3 HOH C 11 375 61 HOH HOH . 
G 3 HOH C 12 376 68 HOH HOH . 
G 3 HOH C 13 377 72 HOH HOH . 
G 3 HOH C 14 378 83 HOH HOH . 
G 3 HOH C 15 379 86 HOH HOH . 
G 3 HOH C 16 380 93 HOH HOH . 
G 3 HOH C 17 381 109 HOH HOH . 
G 3 HOH C 18 382 112 HOH HOH . 
G 3 HOH C 19 383 133 HOH HOH . 
G 3 HOH C 20 384 143 HOH HOH . 
G 3 HOH C 21 385 147 HOH HOH . 
G 3 HOH C 22 386 178 HOH HOH . 
G 3 HOH C 23 387 193 HOH HOH . 
G 3 HOH C 24 388 198 HOH HOH . 
G 3 HOH C 25 389 225 HOH HOH . 
G 3 HOH C 26 390 229 HOH HOH . 
G 3 HOH C 27 391 241 HOH HOH . 
G 3 HOH C 28 392 244 HOH HOH . 
G 3 HOH C 29 393 245 HOH HOH . 
G 3 HOH C 30 394 246 HOH HOH . 
G 3 HOH C 31 395 247 HOH HOH . 
G 3 HOH C 32 396 248 HOH HOH . 
G 3 HOH C 33 397 253 HOH HOH . 
G 3 HOH C 34 398 266 HOH HOH . 
G 3 HOH C 35 399 267 HOH HOH . 
G 3 HOH C 36 400 270 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . D 2 31.897 79.357 29.524 1 34.09 ? C TRS 1 B 1 
HETATM 2 C C1 TRS . . . D 2 31.867 78.135 30.468 1 34.13 ? C1 TRS 1 B 1 
HETATM 3 C C2 TRS . . . D 2 31.236 78.988 28.201 1 33.96 ? C2 TRS 1 B 1 
HETATM 4 C C3 TRS . . . D 2 31.039 80.454 30.159 1 34.66 ? C3 TRS 1 B 1 
HETATM 5 N N TRS . . . D 2 33.277 79.847 29.328 1 33.38 ? N TRS 1 B 1 
HETATM 6 O O1 TRS . . . D 2 32.707 78.253 31.625 1 33.82 ? O1 TRS 1 B 1 
HETATM 7 O O2 TRS . . . D 2 32.082 78.235 27.384 1 32.6 ? O2 TRS 1 B 1 
HETATM 8 O O3 TRS . . . D 2 31.036 81.677 29.467 1 34.41 ? O3 TRS 1 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#