data_2F8Z # _model_server_result.job_id SbAEWKuOeK4qgj9wGa3l5w _model_server_result.datetime_utc '2024-11-25 05:42:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f8z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 2F8Z # _exptl.entry_id 2F8Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2F8Z _cell.length_a 112.155 _cell.length_b 112.155 _cell.length_c 65.725 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F8Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 112.155 112.155 32.8625 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 100 F ASP 103 1_555 B MG MG . F MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc2 A OD2 ASP 100 F ASP 103 1_555 D MG MG . F MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc3 A OD1 ASP 100 F ASP 103 1_555 D MG MG . F MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.899 ? metalc ? metalc4 A OD2 ASP 104 F ASP 107 1_555 B MG MG . F MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc5 A OD2 ASP 104 F ASP 107 1_555 D MG MG . F MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc6 A OD2 ASP 240 F ASP 243 1_555 C MG MG . F MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc7 B MG MG . F MG 1001 1_555 F O17 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? metalc ? metalc8 B MG MG . F MG 1001 1_555 F O12 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc9 B MG MG . F MG 1001 1_555 G O HOH . F HOH 9018 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc10 B MG MG . F MG 1001 1_555 G O HOH . F HOH 9022 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc11 C MG MG . F MG 1002 1_555 F O11 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? metalc ? metalc12 C MG MG . F MG 1002 1_555 F O13 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.056 ? metalc ? metalc13 C MG MG . F MG 1002 1_555 F O16 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc14 C MG MG . F MG 1002 1_555 G O HOH . F HOH 9005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc15 C MG MG . F MG 1002 1_555 G O HOH . F HOH 9007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc16 C MG MG . F MG 1002 1_555 G O HOH . F HOH 9009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? metalc ? metalc17 D MG MG . F MG 1003 1_555 F O12 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? metalc ? metalc18 D MG MG . F MG 1003 1_555 F O10 ZOL . F ZOL 5001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.095 ? metalc ? metalc19 D MG MG . F MG 1003 1_555 G O HOH . F HOH 9002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc20 D MG MG . F MG 1003 1_555 G O HOH . F HOH 9003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc21 D MG MG . F MG 1003 1_555 G O HOH . F HOH 9004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2F8Z _atom_sites.fract_transf_matrix[1][1] 0.008916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG F 1 1001 1001 MG MG . C 2 MG F 1 1002 1002 MG MG . D 2 MG F 1 1003 1003 MG MG . E 3 IPE F 1 9001 9001 IPE IPE . F 4 ZOL F 1 5001 5001 ZOL ZOL . G 5 HOH F 1 9002 1 HOH HOH . G 5 HOH F 2 9003 2 HOH HOH . G 5 HOH F 3 9004 3 HOH HOH . G 5 HOH F 4 9005 4 HOH HOH . G 5 HOH F 5 9006 5 HOH HOH . G 5 HOH F 6 9007 6 HOH HOH . G 5 HOH F 7 9008 7 HOH HOH . G 5 HOH F 8 9009 8 HOH HOH . G 5 HOH F 9 9010 9 HOH HOH . G 5 HOH F 10 9011 10 HOH HOH . G 5 HOH F 11 9012 11 HOH HOH . G 5 HOH F 12 9013 12 HOH HOH . G 5 HOH F 13 9014 13 HOH HOH . G 5 HOH F 14 9015 14 HOH HOH . G 5 HOH F 15 9016 15 HOH HOH . G 5 HOH F 16 9017 16 HOH HOH . G 5 HOH F 17 9018 17 HOH HOH . G 5 HOH F 18 9019 18 HOH HOH . G 5 HOH F 19 9020 19 HOH HOH . G 5 HOH F 20 9021 20 HOH HOH . G 5 HOH F 21 9022 21 HOH HOH . G 5 HOH F 22 9023 22 HOH HOH . G 5 HOH F 23 9024 23 HOH HOH . G 5 HOH F 24 9025 24 HOH HOH . G 5 HOH F 25 9026 25 HOH HOH . G 5 HOH F 26 9027 26 HOH HOH . G 5 HOH F 27 9028 27 HOH HOH . G 5 HOH F 28 9029 28 HOH HOH . G 5 HOH F 29 9030 29 HOH HOH . G 5 HOH F 30 9031 30 HOH HOH . G 5 HOH F 31 9032 31 HOH HOH . G 5 HOH F 32 9033 32 HOH HOH . G 5 HOH F 33 9034 33 HOH HOH . G 5 HOH F 34 9035 34 HOH HOH . G 5 HOH F 35 9036 35 HOH HOH . G 5 HOH F 36 9037 36 HOH HOH . G 5 HOH F 37 9038 37 HOH HOH . G 5 HOH F 38 9039 38 HOH HOH . G 5 HOH F 39 9040 39 HOH HOH . G 5 HOH F 40 9041 40 HOH HOH . G 5 HOH F 41 9042 41 HOH HOH . G 5 HOH F 42 9043 42 HOH HOH . G 5 HOH F 43 9044 43 HOH HOH . G 5 HOH F 44 9045 44 HOH HOH . G 5 HOH F 45 9046 45 HOH HOH . G 5 HOH F 46 9047 46 HOH HOH . G 5 HOH F 47 9048 47 HOH HOH . G 5 HOH F 48 9049 48 HOH HOH . G 5 HOH F 49 9050 49 HOH HOH . G 5 HOH F 50 9051 50 HOH HOH . G 5 HOH F 51 9052 51 HOH HOH . G 5 HOH F 52 9053 52 HOH HOH . G 5 HOH F 53 9054 53 HOH HOH . G 5 HOH F 54 9055 54 HOH HOH . G 5 HOH F 55 9056 55 HOH HOH . G 5 HOH F 56 9057 56 HOH HOH . G 5 HOH F 57 9058 57 HOH HOH . G 5 HOH F 58 9059 58 HOH HOH . G 5 HOH F 59 9060 59 HOH HOH . G 5 HOH F 60 9061 60 HOH HOH . G 5 HOH F 61 9062 61 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.915 _atom_site.Cartn_y 76.693 _atom_site.Cartn_z 23.439 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #