data_2FAI # _model_server_result.job_id h78F21jvSZLFVEnKPyDLoA _model_server_result.datetime_utc '2024-12-02 03:23:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 2FAI # _exptl.entry_id 2FAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(1S,2S,5S,9R)-5-(HYDROXYMETHYL)-8,9-DIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.16 _cell.angle_gamma 90 _cell.entry_id 2FAI _cell.length_a 56.397 _cell.length_b 81.811 _cell.length_c 58.861 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 83 A GLU 380 1_555 A N CME 84 A CME 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C CME 84 A CME 381 1_555 A N ALA 85 A ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C LYS 119 A LYS 416 1_555 A N CME 120 A CME 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C CME 120 A CME 417 1_555 A N VAL 121 A VAL 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale5 A C LYS 232 A LYS 529 1_555 A N CME 233 A CME 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C CME 233 A CME 530 1_555 A N LYS 234 A LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 B C GLU 83 B GLU 380 1_555 B N CME 84 B CME 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale8 B C CME 84 B CME 381 1_555 B N ALA 85 B ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 B C LYS 119 B LYS 416 1_555 B N CME 120 B CME 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 B C CME 120 B CME 417 1_555 B N VAL 121 B VAL 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 B C LYS 232 B LYS 529 1_555 B N CME 233 B CME 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale12 B C CME 233 B CME 530 1_555 B N LYS 234 B LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C17 H24 O3' _chem_comp.formula_weight 276.371 _chem_comp.id 459 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(1S,2S,5S,9R)-5-(HYDROXYMETHYL)-8,9-DIMETHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAT CAK 459 sing 1 n n CAT HAT1 459 sing 2 n n CAT HAT2 459 sing 3 n n CAT HAT3 459 sing 4 n n CAK CAJ 459 sing 5 n n CAK CAL 459 sing 6 n n CAK HAK 459 sing 7 n n CAJ CAN 459 sing 8 n n CAJ CAI 459 sing 9 n n CAJ HAJ 459 sing 10 n n CAN CAQ 459 sing 11 n n CAN CAP 459 sing 12 n n CAN HAN 459 sing 13 n n CAQ HAQ1 459 sing 14 n n CAQ HAQ2 459 sing 15 n n CAQ HAQ3 459 sing 16 n n CAP CAO 459 sing 17 n n CAP HAP1 459 sing 18 n n CAP HAP2 459 sing 19 n n CAO CAL 459 sing 20 n n CAO HAO1 459 sing 21 n n CAO HAO2 459 sing 22 n n CAL CAR 459 sing 23 n n CAL CAM 459 sing 24 n n CAR OAS 459 sing 25 n n CAR HAR1 459 sing 26 n n CAR HAR2 459 sing 27 n n OAS HAS 459 sing 28 n n CAM OAH 459 sing 29 n n CAM HAM1 459 sing 30 n n CAM HAM2 459 sing 31 n n OAH CAI 459 sing 32 n n CAI CAD 459 sing 33 n n CAI HAI 459 sing 34 n n CAD CAC 459 sing 35 n y CAD CAE 459 doub 36 n y CAC CAB 459 doub 37 n y CAC HAC 459 sing 38 n n CAB CAA 459 sing 39 n y CAB HAB 459 sing 40 n n CAA OAG 459 sing 41 n n CAA CAF 459 doub 42 n y OAG HAG 459 sing 43 n n CAF CAE 459 sing 44 n y CAF HAF 459 sing 45 n n CAE HAE 459 sing 46 n n # _atom_sites.entry_id 2FAI _atom_sites.fract_transf_matrix[1][1] 0.017731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006863 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012223 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018217 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 459 A 1 101 101 459 459 . F 3 459 B 1 201 201 459 459 . G 4 HOH A 1 1 1 HOH HOH . G 4 HOH A 2 2 2 HOH HOH . G 4 HOH A 3 7 7 HOH HOH . G 4 HOH A 4 8 8 HOH HOH . G 4 HOH A 5 9 9 HOH HOH . G 4 HOH A 6 14 14 HOH HOH . G 4 HOH A 7 15 15 HOH HOH . G 4 HOH A 8 18 18 HOH HOH . G 4 HOH A 9 19 19 HOH HOH . G 4 HOH A 10 21 21 HOH HOH . H 4 HOH B 1 3 3 HOH HOH . H 4 HOH B 2 4 4 HOH HOH . H 4 HOH B 3 5 5 HOH HOH . H 4 HOH B 4 6 6 HOH HOH . H 4 HOH B 5 10 10 HOH HOH . H 4 HOH B 6 11 11 HOH HOH . H 4 HOH B 7 12 12 HOH HOH . H 4 HOH B 8 13 13 HOH HOH . H 4 HOH B 9 16 16 HOH HOH . H 4 HOH B 10 17 17 HOH HOH . H 4 HOH B 11 20 20 HOH HOH . H 4 HOH B 12 22 22 HOH HOH . H 4 HOH B 13 23 23 HOH HOH . H 4 HOH B 14 24 24 HOH HOH . H 4 HOH B 15 25 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAT 459 . A . F 3 -2.719 -7.183 18.734 0.5 20 ? CAT 459 201 B 1 HETATM 2 C CAT 459 . B . F 3 -0.985 -8.688 18.999 0.5 58.97 ? CAT 459 201 B 1 HETATM 3 C CAK 459 . . . F 3 -2.15 -8.124 19.811 1 51.97 ? CAK 459 201 B 1 HETATM 4 C CAJ 459 . . . F 3 -1.664 -7.304 21.007 1 50.41 ? CAJ 459 201 B 1 HETATM 5 C CAN 459 . . . F 3 -2.908 -6.634 21.552 1 38.75 ? CAN 459 201 B 1 HETATM 6 C CAQ 459 . . . F 3 -2.841 -5.2 22.087 1 29.98 ? CAQ 459 201 B 1 HETATM 7 C CAP 459 . . . F 3 -4.106 -7.351 21.529 1 47.51 ? CAP 459 201 B 1 HETATM 8 C CAO 459 . . . F 3 -4.302 -8.659 21.057 1 45.56 ? CAO 459 201 B 1 HETATM 9 C CAL 459 . . . F 3 -3.077 -9.239 20.32 1 51.29 ? CAL 459 201 B 1 HETATM 10 C CAR 459 . . . F 3 -3.534 -10.151 19.174 1 51.99 ? CAR 459 201 B 1 HETATM 11 O OAS 459 . . . F 3 -4.774 -9.679 18.626 1 45.11 ? OAS 459 201 B 1 HETATM 12 C CAM 459 . . . F 3 -2.288 -10.083 21.3 1 53.94 ? CAM 459 201 B 1 HETATM 13 O OAH 459 . . . F 3 -1.969 -9.261 22.443 1 61.07 ? OAH 459 201 B 1 HETATM 14 C CAI 459 . . . F 3 -1.041 -8.221 22.096 1 42.09 ? CAI 459 201 B 1 HETATM 15 C CAD 459 . . . F 3 -0.628 -7.512 23.404 1 36.94 ? CAD 459 201 B 1 HETATM 16 C CAC 459 . . . F 3 -1.474 -7.417 24.504 1 31.16 ? CAC 459 201 B 1 HETATM 17 C CAB 459 . . . F 3 -1.062 -6.772 25.67 1 36.24 ? CAB 459 201 B 1 HETATM 18 C CAA 459 . . . F 3 0.209 -6.213 25.735 1 38.16 ? CAA 459 201 B 1 HETATM 19 O OAG 459 . . . F 3 0.657 -5.582 26.852 1 34.39 ? OAG 459 201 B 1 HETATM 20 C CAF 459 . . . F 3 1.052 -6.314 24.64 1 32.38 ? CAF 459 201 B 1 HETATM 21 C CAE 459 . . . F 3 0.636 -6.955 23.485 1 27.11 ? CAE 459 201 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #