data_2FD8 # _model_server_result.job_id NTzN3hYREsdtICl7Gw-XaQ _model_server_result.datetime_utc '2024-12-03 19:37:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fd8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 2FD8 # _exptl.entry_id 2FD8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2FD8 _cell.length_a 40.746 _cell.length_b 40.746 _cell.length_c 118.304 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FD8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DT 1 B DT 501 1_555 A P MA7 2 B MA7 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.593 ? covale ? covale2 A O3' MA7 2 B MA7 502 1_555 A P DT 3 B DT 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? metalc ? metalc1 B NE2 HIS 121 A HIS 131 1_555 C FE FE2 . A FE2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 B OD1 ASP 123 A ASP 133 1_555 C FE FE2 . A FE2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc3 B NE2 HIS 177 A HIS 187 1_555 C FE FE2 . A FE2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc4 C FE FE2 . A FE2 300 1_555 D O5 AKG . A AKG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc5 C FE FE2 . A FE2 300 1_555 D O2 AKG . A AKG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2FD8 _atom_sites.fract_transf_matrix[1][1] 0.024542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FE2 A 1 300 300 FE2 FE2 . D 4 AKG A 1 400 400 AKG AKG . E 5 HOH B 1 602 602 HOH HOH . E 5 HOH B 2 607 607 HOH HOH . E 5 HOH B 3 627 627 HOH HOH . E 5 HOH B 4 632 632 HOH HOH . E 5 HOH B 5 633 633 HOH HOH . E 5 HOH B 6 652 652 HOH HOH . E 5 HOH B 7 680 680 HOH HOH . E 5 HOH B 8 687 687 HOH HOH . E 5 HOH B 9 698 698 HOH HOH . E 5 HOH B 10 708 708 HOH HOH . E 5 HOH B 11 733 733 HOH HOH . E 5 HOH B 12 736 736 HOH HOH . E 5 HOH B 13 752 752 HOH HOH . E 5 HOH B 14 757 757 HOH HOH . E 5 HOH B 15 758 758 HOH HOH . E 5 HOH B 16 767 767 HOH HOH . E 5 HOH B 17 774 774 HOH HOH . E 5 HOH B 18 800 800 HOH HOH . F 5 HOH A 1 601 601 HOH HOH . F 5 HOH A 2 603 603 HOH HOH . F 5 HOH A 3 604 604 HOH HOH . F 5 HOH A 4 605 605 HOH HOH . F 5 HOH A 5 606 606 HOH HOH . F 5 HOH A 6 608 608 HOH HOH . F 5 HOH A 7 609 609 HOH HOH . F 5 HOH A 8 610 610 HOH HOH . F 5 HOH A 9 611 611 HOH HOH . F 5 HOH A 10 612 612 HOH HOH . F 5 HOH A 11 613 613 HOH HOH . F 5 HOH A 12 614 614 HOH HOH . F 5 HOH A 13 615 615 HOH HOH . F 5 HOH A 14 616 616 HOH HOH . F 5 HOH A 15 617 617 HOH HOH . F 5 HOH A 16 618 618 HOH HOH . F 5 HOH A 17 619 619 HOH HOH . F 5 HOH A 18 620 620 HOH HOH . F 5 HOH A 19 621 621 HOH HOH . F 5 HOH A 20 622 622 HOH HOH . F 5 HOH A 21 623 623 HOH HOH . F 5 HOH A 22 624 624 HOH HOH . F 5 HOH A 23 625 625 HOH HOH . F 5 HOH A 24 626 626 HOH HOH . F 5 HOH A 25 628 628 HOH HOH . F 5 HOH A 26 629 629 HOH HOH . F 5 HOH A 27 630 630 HOH HOH . F 5 HOH A 28 631 631 HOH HOH . F 5 HOH A 29 634 634 HOH HOH . F 5 HOH A 30 635 635 HOH HOH . F 5 HOH A 31 636 636 HOH HOH . F 5 HOH A 32 637 637 HOH HOH . F 5 HOH A 33 638 638 HOH HOH . F 5 HOH A 34 639 639 HOH HOH . F 5 HOH A 35 640 640 HOH HOH . F 5 HOH A 36 641 641 HOH HOH . F 5 HOH A 37 642 642 HOH HOH . F 5 HOH A 38 643 643 HOH HOH . F 5 HOH A 39 644 644 HOH HOH . F 5 HOH A 40 645 645 HOH HOH . F 5 HOH A 41 646 646 HOH HOH . F 5 HOH A 42 647 647 HOH HOH . F 5 HOH A 43 648 648 HOH HOH . F 5 HOH A 44 649 649 HOH HOH . F 5 HOH A 45 650 650 HOH HOH . F 5 HOH A 46 651 651 HOH HOH . F 5 HOH A 47 653 653 HOH HOH . F 5 HOH A 48 654 654 HOH HOH . F 5 HOH A 49 655 655 HOH HOH . F 5 HOH A 50 656 656 HOH HOH . F 5 HOH A 51 657 657 HOH HOH . F 5 HOH A 52 658 658 HOH HOH . F 5 HOH A 53 659 659 HOH HOH . F 5 HOH A 54 660 660 HOH HOH . F 5 HOH A 55 661 661 HOH HOH . F 5 HOH A 56 662 662 HOH HOH . F 5 HOH A 57 663 663 HOH HOH . F 5 HOH A 58 664 664 HOH HOH . F 5 HOH A 59 665 665 HOH HOH . F 5 HOH A 60 666 666 HOH HOH . F 5 HOH A 61 667 667 HOH HOH . F 5 HOH A 62 668 668 HOH HOH . F 5 HOH A 63 669 669 HOH HOH . F 5 HOH A 64 670 670 HOH HOH . F 5 HOH A 65 671 671 HOH HOH . F 5 HOH A 66 672 672 HOH HOH . F 5 HOH A 67 673 673 HOH HOH . F 5 HOH A 68 674 674 HOH HOH . F 5 HOH A 69 675 675 HOH HOH . F 5 HOH A 70 676 676 HOH HOH . F 5 HOH A 71 677 677 HOH HOH . F 5 HOH A 72 678 678 HOH HOH . F 5 HOH A 73 679 679 HOH HOH . F 5 HOH A 74 681 681 HOH HOH . F 5 HOH A 75 682 682 HOH HOH . F 5 HOH A 76 683 683 HOH HOH . F 5 HOH A 77 684 684 HOH HOH . F 5 HOH A 78 685 685 HOH HOH . F 5 HOH A 79 686 686 HOH HOH . F 5 HOH A 80 688 688 HOH HOH . F 5 HOH A 81 689 689 HOH HOH . F 5 HOH A 82 690 690 HOH HOH . F 5 HOH A 83 691 691 HOH HOH . F 5 HOH A 84 692 692 HOH HOH . F 5 HOH A 85 693 693 HOH HOH . F 5 HOH A 86 694 694 HOH HOH . F 5 HOH A 87 695 695 HOH HOH . F 5 HOH A 88 696 696 HOH HOH . F 5 HOH A 89 697 697 HOH HOH . F 5 HOH A 90 699 699 HOH HOH . F 5 HOH A 91 700 700 HOH HOH . F 5 HOH A 92 701 701 HOH HOH . F 5 HOH A 93 702 702 HOH HOH . F 5 HOH A 94 703 703 HOH HOH . F 5 HOH A 95 704 704 HOH HOH . F 5 HOH A 96 705 705 HOH HOH . F 5 HOH A 97 706 706 HOH HOH . F 5 HOH A 98 707 707 HOH HOH . F 5 HOH A 99 709 709 HOH HOH . F 5 HOH A 100 710 710 HOH HOH . F 5 HOH A 101 711 711 HOH HOH . F 5 HOH A 102 712 712 HOH HOH . F 5 HOH A 103 713 713 HOH HOH . F 5 HOH A 104 714 714 HOH HOH . F 5 HOH A 105 715 715 HOH HOH . F 5 HOH A 106 716 716 HOH HOH . F 5 HOH A 107 717 717 HOH HOH . F 5 HOH A 108 718 718 HOH HOH . F 5 HOH A 109 719 719 HOH HOH . F 5 HOH A 110 720 720 HOH HOH . F 5 HOH A 111 721 721 HOH HOH . F 5 HOH A 112 722 722 HOH HOH . F 5 HOH A 113 723 723 HOH HOH . F 5 HOH A 114 724 724 HOH HOH . F 5 HOH A 115 725 725 HOH HOH . F 5 HOH A 116 726 726 HOH HOH . F 5 HOH A 117 727 727 HOH HOH . F 5 HOH A 118 728 728 HOH HOH . F 5 HOH A 119 729 729 HOH HOH . F 5 HOH A 120 730 730 HOH HOH . F 5 HOH A 121 731 731 HOH HOH . F 5 HOH A 122 732 732 HOH HOH . F 5 HOH A 123 734 734 HOH HOH . F 5 HOH A 124 735 735 HOH HOH . F 5 HOH A 125 737 737 HOH HOH . F 5 HOH A 126 738 738 HOH HOH . F 5 HOH A 127 739 739 HOH HOH . F 5 HOH A 128 740 740 HOH HOH . F 5 HOH A 129 741 741 HOH HOH . F 5 HOH A 130 742 742 HOH HOH . F 5 HOH A 131 743 743 HOH HOH . F 5 HOH A 132 744 744 HOH HOH . F 5 HOH A 133 745 745 HOH HOH . F 5 HOH A 134 746 746 HOH HOH . F 5 HOH A 135 747 747 HOH HOH . F 5 HOH A 136 748 748 HOH HOH . F 5 HOH A 137 749 749 HOH HOH . F 5 HOH A 138 750 750 HOH HOH . F 5 HOH A 139 751 751 HOH HOH . F 5 HOH A 140 753 753 HOH HOH . F 5 HOH A 141 754 754 HOH HOH . F 5 HOH A 142 755 755 HOH HOH . F 5 HOH A 143 756 756 HOH HOH . F 5 HOH A 144 759 759 HOH HOH . F 5 HOH A 145 760 760 HOH HOH . F 5 HOH A 146 761 761 HOH HOH . F 5 HOH A 147 762 762 HOH HOH . F 5 HOH A 148 763 763 HOH HOH . F 5 HOH A 149 764 764 HOH HOH . F 5 HOH A 150 765 765 HOH HOH . F 5 HOH A 151 766 766 HOH HOH . F 5 HOH A 152 768 768 HOH HOH . F 5 HOH A 153 769 769 HOH HOH . F 5 HOH A 154 770 770 HOH HOH . F 5 HOH A 155 771 771 HOH HOH . F 5 HOH A 156 772 772 HOH HOH . F 5 HOH A 157 773 773 HOH HOH . F 5 HOH A 158 775 775 HOH HOH . F 5 HOH A 159 776 776 HOH HOH . F 5 HOH A 160 777 777 HOH HOH . F 5 HOH A 161 778 778 HOH HOH . F 5 HOH A 162 779 779 HOH HOH . F 5 HOH A 163 780 780 HOH HOH . F 5 HOH A 164 781 781 HOH HOH . F 5 HOH A 165 782 782 HOH HOH . F 5 HOH A 166 783 783 HOH HOH . F 5 HOH A 167 784 784 HOH HOH . F 5 HOH A 168 785 785 HOH HOH . F 5 HOH A 169 786 786 HOH HOH . F 5 HOH A 170 787 787 HOH HOH . F 5 HOH A 171 788 788 HOH HOH . F 5 HOH A 172 789 789 HOH HOH . F 5 HOH A 173 790 790 HOH HOH . F 5 HOH A 174 791 791 HOH HOH . F 5 HOH A 175 792 792 HOH HOH . F 5 HOH A 176 793 793 HOH HOH . F 5 HOH A 177 794 794 HOH HOH . F 5 HOH A 178 795 795 HOH HOH . F 5 HOH A 179 796 796 HOH HOH . F 5 HOH A 180 797 797 HOH HOH . F 5 HOH A 181 798 798 HOH HOH . F 5 HOH A 182 799 799 HOH HOH . F 5 HOH A 183 801 801 HOH HOH . F 5 HOH A 184 802 802 HOH HOH . F 5 HOH A 185 803 803 HOH HOH . F 5 HOH A 186 804 804 HOH HOH . F 5 HOH A 187 805 805 HOH HOH . F 5 HOH A 188 806 806 HOH HOH . F 5 HOH A 189 807 807 HOH HOH . F 5 HOH A 190 808 808 HOH HOH . F 5 HOH A 191 809 809 HOH HOH . F 5 HOH A 192 810 810 HOH HOH . F 5 HOH A 193 811 811 HOH HOH . F 5 HOH A 194 812 812 HOH HOH . F 5 HOH A 195 813 813 HOH HOH . F 5 HOH A 196 814 814 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 23.62 _atom_site.Cartn_y 39.639 _atom_site.Cartn_z 59.298 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.7 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #