data_2FDK
#
_model_server_result.job_id            iwTnbCIedHq7bOgLODIvlQ 
_model_server_result.datetime_utc      '2024-11-25 16:17:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2fdk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":300}' 
#
_entry.id    2FDK 
#
_exptl.entry_id    2FDK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              55.845 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2FDK 
_cell.length_a            40.576 
_cell.length_b            40.576 
_cell.length_c            117.049 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2FDK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A O3' DT 1 B DT 501 1_555 A P MA7 2 B MA7 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.611 ? 
covale ? covale2 A O3' MA7 2 B MA7 502 1_555 A P DT 3 B DT 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? 
metalc ? metalc1 B NE2 HIS 121 A HIS 131 1_555 C FE FE2 . A FE2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc2 B OD1 ASP 123 A ASP 133 1_555 C FE FE2 . A FE2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc3 B NE2 HIS 177 A HIS 187 1_555 C FE FE2 . A FE2 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc4 C FE FE2 . A FE2 300 1_555 D O2 AKG . A AKG 400 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc5 C FE FE2 . A FE2 300 1_555 D O5 AKG . A AKG 400 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc6 C FE FE2 . A FE2 300 1_555 E O1 SIN . A SIN 401 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc7 C FE FE2 . A FE2 300 1_555 G O HOH . A HOH 720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? 
metalc ? metalc8 C FE FE2 . A FE2 300 1_555 G O HOH . A HOH 792 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.456 ? 
#
_chem_comp.formula           'Fe 2' 
_chem_comp.formula_weight    55.845 
_chem_comp.id                FE2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2FDK 
_atom_sites.fract_transf_matrix[1][1]    0.024645 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024645 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008543 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FE2 A 1 300 300 FE2 FE2 . 
D 4 AKG A 1 400 400 AKG AKG . 
E 5 SIN A 1 401 401 SIN SIN . 
F 6 HOH B 1 602 602 HOH HOH . 
F 6 HOH B 2 607 607 HOH HOH . 
F 6 HOH B 3 629 629 HOH HOH . 
F 6 HOH B 4 634 634 HOH HOH . 
F 6 HOH B 5 635 635 HOH HOH . 
F 6 HOH B 6 690 690 HOH HOH . 
F 6 HOH B 7 712 712 HOH HOH . 
F 6 HOH B 8 715 715 HOH HOH . 
F 6 HOH B 9 717 717 HOH HOH . 
F 6 HOH B 10 725 725 HOH HOH . 
F 6 HOH B 11 735 735 HOH HOH . 
F 6 HOH B 12 748 748 HOH HOH . 
F 6 HOH B 13 753 753 HOH HOH . 
F 6 HOH B 14 765 765 HOH HOH . 
F 6 HOH B 15 776 776 HOH HOH . 
G 6 HOH A 1 601 601 HOH HOH . 
G 6 HOH A 2 603 603 HOH HOH . 
G 6 HOH A 3 604 604 HOH HOH . 
G 6 HOH A 4 605 605 HOH HOH . 
G 6 HOH A 5 606 606 HOH HOH . 
G 6 HOH A 6 608 608 HOH HOH . 
G 6 HOH A 7 609 609 HOH HOH . 
G 6 HOH A 8 610 610 HOH HOH . 
G 6 HOH A 9 611 611 HOH HOH . 
G 6 HOH A 10 612 612 HOH HOH . 
G 6 HOH A 11 613 613 HOH HOH . 
G 6 HOH A 12 614 614 HOH HOH . 
G 6 HOH A 13 615 615 HOH HOH . 
G 6 HOH A 14 616 616 HOH HOH . 
G 6 HOH A 15 617 617 HOH HOH . 
G 6 HOH A 16 618 618 HOH HOH . 
G 6 HOH A 17 619 619 HOH HOH . 
G 6 HOH A 18 620 620 HOH HOH . 
G 6 HOH A 19 621 621 HOH HOH . 
G 6 HOH A 20 622 622 HOH HOH . 
G 6 HOH A 21 623 623 HOH HOH . 
G 6 HOH A 22 624 624 HOH HOH . 
G 6 HOH A 23 625 625 HOH HOH . 
G 6 HOH A 24 626 626 HOH HOH . 
G 6 HOH A 25 627 627 HOH HOH . 
G 6 HOH A 26 628 628 HOH HOH . 
G 6 HOH A 27 630 630 HOH HOH . 
G 6 HOH A 28 631 631 HOH HOH . 
G 6 HOH A 29 632 632 HOH HOH . 
G 6 HOH A 30 633 633 HOH HOH . 
G 6 HOH A 31 636 636 HOH HOH . 
G 6 HOH A 32 637 637 HOH HOH . 
G 6 HOH A 33 638 638 HOH HOH . 
G 6 HOH A 34 639 639 HOH HOH . 
G 6 HOH A 35 640 640 HOH HOH . 
G 6 HOH A 36 641 641 HOH HOH . 
G 6 HOH A 37 642 642 HOH HOH . 
G 6 HOH A 38 643 643 HOH HOH . 
G 6 HOH A 39 644 644 HOH HOH . 
G 6 HOH A 40 645 645 HOH HOH . 
G 6 HOH A 41 646 646 HOH HOH . 
G 6 HOH A 42 647 647 HOH HOH . 
G 6 HOH A 43 648 648 HOH HOH . 
G 6 HOH A 44 649 649 HOH HOH . 
G 6 HOH A 45 650 650 HOH HOH . 
G 6 HOH A 46 651 651 HOH HOH . 
G 6 HOH A 47 652 652 HOH HOH . 
G 6 HOH A 48 653 653 HOH HOH . 
G 6 HOH A 49 654 654 HOH HOH . 
G 6 HOH A 50 655 655 HOH HOH . 
G 6 HOH A 51 656 656 HOH HOH . 
G 6 HOH A 52 657 657 HOH HOH . 
G 6 HOH A 53 658 658 HOH HOH . 
G 6 HOH A 54 659 659 HOH HOH . 
G 6 HOH A 55 660 660 HOH HOH . 
G 6 HOH A 56 661 661 HOH HOH . 
G 6 HOH A 57 662 662 HOH HOH . 
G 6 HOH A 58 663 663 HOH HOH . 
G 6 HOH A 59 664 664 HOH HOH . 
G 6 HOH A 60 665 665 HOH HOH . 
G 6 HOH A 61 666 666 HOH HOH . 
G 6 HOH A 62 667 667 HOH HOH . 
G 6 HOH A 63 668 668 HOH HOH . 
G 6 HOH A 64 669 669 HOH HOH . 
G 6 HOH A 65 670 670 HOH HOH . 
G 6 HOH A 66 671 671 HOH HOH . 
G 6 HOH A 67 672 672 HOH HOH . 
G 6 HOH A 68 673 673 HOH HOH . 
G 6 HOH A 69 674 674 HOH HOH . 
G 6 HOH A 70 675 675 HOH HOH . 
G 6 HOH A 71 676 676 HOH HOH . 
G 6 HOH A 72 677 677 HOH HOH . 
G 6 HOH A 73 678 678 HOH HOH . 
G 6 HOH A 74 679 679 HOH HOH . 
G 6 HOH A 75 680 680 HOH HOH . 
G 6 HOH A 76 681 681 HOH HOH . 
G 6 HOH A 77 682 682 HOH HOH . 
G 6 HOH A 78 683 683 HOH HOH . 
G 6 HOH A 79 684 684 HOH HOH . 
G 6 HOH A 80 685 685 HOH HOH . 
G 6 HOH A 81 686 686 HOH HOH . 
G 6 HOH A 82 687 687 HOH HOH . 
G 6 HOH A 83 688 688 HOH HOH . 
G 6 HOH A 84 689 689 HOH HOH . 
G 6 HOH A 85 691 691 HOH HOH . 
G 6 HOH A 86 692 692 HOH HOH . 
G 6 HOH A 87 693 693 HOH HOH . 
G 6 HOH A 88 694 694 HOH HOH . 
G 6 HOH A 89 695 695 HOH HOH . 
G 6 HOH A 90 696 696 HOH HOH . 
G 6 HOH A 91 697 697 HOH HOH . 
G 6 HOH A 92 698 698 HOH HOH . 
G 6 HOH A 93 699 699 HOH HOH . 
G 6 HOH A 94 700 700 HOH HOH . 
G 6 HOH A 95 701 701 HOH HOH . 
G 6 HOH A 96 702 702 HOH HOH . 
G 6 HOH A 97 703 703 HOH HOH . 
G 6 HOH A 98 704 704 HOH HOH . 
G 6 HOH A 99 705 705 HOH HOH . 
G 6 HOH A 100 706 706 HOH HOH . 
G 6 HOH A 101 707 707 HOH HOH . 
G 6 HOH A 102 708 708 HOH HOH . 
G 6 HOH A 103 709 709 HOH HOH . 
G 6 HOH A 104 710 710 HOH HOH . 
G 6 HOH A 105 711 711 HOH HOH . 
G 6 HOH A 106 713 713 HOH HOH . 
G 6 HOH A 107 714 714 HOH HOH . 
G 6 HOH A 108 716 716 HOH HOH . 
G 6 HOH A 109 718 718 HOH HOH . 
G 6 HOH A 110 719 719 HOH HOH . 
G 6 HOH A 111 720 720 HOH HOH . 
G 6 HOH A 112 721 721 HOH HOH . 
G 6 HOH A 113 722 722 HOH HOH . 
G 6 HOH A 114 723 723 HOH HOH . 
G 6 HOH A 115 724 724 HOH HOH . 
G 6 HOH A 116 726 726 HOH HOH . 
G 6 HOH A 117 727 727 HOH HOH . 
G 6 HOH A 118 728 728 HOH HOH . 
G 6 HOH A 119 729 729 HOH HOH . 
G 6 HOH A 120 730 730 HOH HOH . 
G 6 HOH A 121 731 731 HOH HOH . 
G 6 HOH A 122 732 732 HOH HOH . 
G 6 HOH A 123 733 733 HOH HOH . 
G 6 HOH A 124 734 734 HOH HOH . 
G 6 HOH A 125 736 736 HOH HOH . 
G 6 HOH A 126 737 737 HOH HOH . 
G 6 HOH A 127 738 738 HOH HOH . 
G 6 HOH A 128 739 739 HOH HOH . 
G 6 HOH A 129 740 740 HOH HOH . 
G 6 HOH A 130 741 741 HOH HOH . 
G 6 HOH A 131 742 742 HOH HOH . 
G 6 HOH A 132 743 743 HOH HOH . 
G 6 HOH A 133 744 744 HOH HOH . 
G 6 HOH A 134 745 745 HOH HOH . 
G 6 HOH A 135 746 746 HOH HOH . 
G 6 HOH A 136 747 747 HOH HOH . 
G 6 HOH A 137 749 749 HOH HOH . 
G 6 HOH A 138 750 750 HOH HOH . 
G 6 HOH A 139 751 751 HOH HOH . 
G 6 HOH A 140 752 752 HOH HOH . 
G 6 HOH A 141 754 754 HOH HOH . 
G 6 HOH A 142 755 755 HOH HOH . 
G 6 HOH A 143 756 756 HOH HOH . 
G 6 HOH A 144 757 757 HOH HOH . 
G 6 HOH A 145 758 758 HOH HOH . 
G 6 HOH A 146 759 759 HOH HOH . 
G 6 HOH A 147 760 760 HOH HOH . 
G 6 HOH A 148 761 761 HOH HOH . 
G 6 HOH A 149 762 762 HOH HOH . 
G 6 HOH A 150 763 763 HOH HOH . 
G 6 HOH A 151 764 764 HOH HOH . 
G 6 HOH A 152 766 766 HOH HOH . 
G 6 HOH A 153 767 767 HOH HOH . 
G 6 HOH A 154 768 768 HOH HOH . 
G 6 HOH A 155 769 769 HOH HOH . 
G 6 HOH A 156 770 770 HOH HOH . 
G 6 HOH A 157 771 771 HOH HOH . 
G 6 HOH A 158 772 772 HOH HOH . 
G 6 HOH A 159 773 773 HOH HOH . 
G 6 HOH A 160 774 774 HOH HOH . 
G 6 HOH A 161 775 775 HOH HOH . 
G 6 HOH A 162 777 777 HOH HOH . 
G 6 HOH A 163 778 778 HOH HOH . 
G 6 HOH A 164 779 779 HOH HOH . 
G 6 HOH A 165 780 780 HOH HOH . 
G 6 HOH A 166 781 781 HOH HOH . 
G 6 HOH A 167 782 782 HOH HOH . 
G 6 HOH A 168 783 783 HOH HOH . 
G 6 HOH A 169 784 784 HOH HOH . 
G 6 HOH A 170 785 785 HOH HOH . 
G 6 HOH A 171 786 786 HOH HOH . 
G 6 HOH A 172 787 787 HOH HOH . 
G 6 HOH A 173 788 788 HOH HOH . 
G 6 HOH A 174 789 789 HOH HOH . 
G 6 HOH A 175 790 790 HOH HOH . 
G 6 HOH A 176 791 791 HOH HOH . 
G 6 HOH A 177 792 792 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           FE 
_atom_site.label_atom_id         FE 
_atom_site.label_comp_id         FE2 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               19.125 
_atom_site.Cartn_y               3.394 
_atom_site.Cartn_z               -4.763 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        32.37 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          FE 
_atom_site.auth_comp_id          FE2 
_atom_site.auth_seq_id           300 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#