data_2FGJ # _model_server_result.job_id 4aTosvx3l6Cq8UH5-iIZnw _model_server_result.datetime_utc '2024-11-20 11:43:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fgj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 2FGJ # _exptl.entry_id 2FGJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.85 _cell.angle_gamma 90 _cell.entry_id 2FGJ _cell.length_a 46.558 _cell.length_b 195.166 _cell.length_c 63.288 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FGJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 2FGJ _atom_sites.fract_transf_matrix[1][1] 0.021479 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00818 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ATP A 1 800 800 ATP ATP . F 2 ATP B 1 801 800 ATP ATP . G 2 ATP C 1 802 800 ATP ATP . H 2 ATP D 1 803 800 ATP ATP . I 3 HOH A 1 4 4 HOH HOH . I 3 HOH A 2 17 17 HOH HOH . I 3 HOH A 3 22 22 HOH HOH . I 3 HOH A 4 28 28 HOH HOH . I 3 HOH A 5 29 29 HOH HOH . I 3 HOH A 6 31 31 HOH HOH . I 3 HOH A 7 41 41 HOH HOH . I 3 HOH A 8 47 47 HOH HOH . I 3 HOH A 9 51 51 HOH HOH . I 3 HOH A 10 57 57 HOH HOH . I 3 HOH A 11 64 64 HOH HOH . I 3 HOH A 12 72 72 HOH HOH . I 3 HOH A 13 73 73 HOH HOH . I 3 HOH A 14 74 74 HOH HOH . I 3 HOH A 15 76 76 HOH HOH . I 3 HOH A 16 79 79 HOH HOH . I 3 HOH A 17 83 83 HOH HOH . I 3 HOH A 18 88 88 HOH HOH . I 3 HOH A 19 89 89 HOH HOH . I 3 HOH A 20 90 90 HOH HOH . I 3 HOH A 21 91 91 HOH HOH . I 3 HOH A 22 94 94 HOH HOH . I 3 HOH A 23 99 99 HOH HOH . I 3 HOH A 24 100 100 HOH HOH . I 3 HOH A 25 102 102 HOH HOH . I 3 HOH A 26 105 105 HOH HOH . I 3 HOH A 27 106 106 HOH HOH . I 3 HOH A 28 108 108 HOH HOH . I 3 HOH A 29 110 110 HOH HOH . I 3 HOH A 30 113 113 HOH HOH . I 3 HOH A 31 115 115 HOH HOH . I 3 HOH A 32 116 116 HOH HOH . I 3 HOH A 33 120 120 HOH HOH . I 3 HOH A 34 123 123 HOH HOH . I 3 HOH A 35 127 127 HOH HOH . I 3 HOH A 36 128 128 HOH HOH . I 3 HOH A 37 136 136 HOH HOH . I 3 HOH A 38 141 141 HOH HOH . I 3 HOH A 39 145 145 HOH HOH . I 3 HOH A 40 146 146 HOH HOH . I 3 HOH A 41 151 151 HOH HOH . I 3 HOH A 42 166 166 HOH HOH . I 3 HOH A 43 167 167 HOH HOH . I 3 HOH A 44 169 169 HOH HOH . I 3 HOH A 45 176 176 HOH HOH . I 3 HOH A 46 183 183 HOH HOH . I 3 HOH A 47 188 188 HOH HOH . I 3 HOH A 48 193 193 HOH HOH . I 3 HOH A 49 194 194 HOH HOH . I 3 HOH A 50 196 196 HOH HOH . J 3 HOH B 1 1 1 HOH HOH . J 3 HOH B 2 9 9 HOH HOH . J 3 HOH B 3 10 10 HOH HOH . J 3 HOH B 4 11 11 HOH HOH . J 3 HOH B 5 12 12 HOH HOH . J 3 HOH B 6 13 13 HOH HOH . J 3 HOH B 7 14 14 HOH HOH . J 3 HOH B 8 21 21 HOH HOH . J 3 HOH B 9 34 34 HOH HOH . J 3 HOH B 10 37 37 HOH HOH . J 3 HOH B 11 43 43 HOH HOH . J 3 HOH B 12 45 45 HOH HOH . J 3 HOH B 13 49 49 HOH HOH . J 3 HOH B 14 50 50 HOH HOH . J 3 HOH B 15 52 52 HOH HOH . J 3 HOH B 16 54 54 HOH HOH . J 3 HOH B 17 56 56 HOH HOH . J 3 HOH B 18 59 59 HOH HOH . J 3 HOH B 19 60 60 HOH HOH . J 3 HOH B 20 61 61 HOH HOH . J 3 HOH B 21 63 63 HOH HOH . J 3 HOH B 22 65 65 HOH HOH . J 3 HOH B 23 67 67 HOH HOH . J 3 HOH B 24 68 68 HOH HOH . J 3 HOH B 25 70 70 HOH HOH . J 3 HOH B 26 75 75 HOH HOH . J 3 HOH B 27 80 80 HOH HOH . J 3 HOH B 28 81 81 HOH HOH . J 3 HOH B 29 86 86 HOH HOH . J 3 HOH B 30 92 92 HOH HOH . J 3 HOH B 31 93 93 HOH HOH . J 3 HOH B 32 101 101 HOH HOH . J 3 HOH B 33 103 103 HOH HOH . J 3 HOH B 34 107 107 HOH HOH . J 3 HOH B 35 112 112 HOH HOH . J 3 HOH B 36 121 121 HOH HOH . J 3 HOH B 37 124 124 HOH HOH . J 3 HOH B 38 129 129 HOH HOH . J 3 HOH B 39 131 131 HOH HOH . J 3 HOH B 40 132 132 HOH HOH . J 3 HOH B 41 133 133 HOH HOH . J 3 HOH B 42 135 135 HOH HOH . J 3 HOH B 43 139 139 HOH HOH . J 3 HOH B 44 140 140 HOH HOH . J 3 HOH B 45 147 147 HOH HOH . J 3 HOH B 46 152 152 HOH HOH . J 3 HOH B 47 164 164 HOH HOH . J 3 HOH B 48 172 172 HOH HOH . J 3 HOH B 49 173 173 HOH HOH . J 3 HOH B 50 177 177 HOH HOH . J 3 HOH B 51 185 185 HOH HOH . J 3 HOH B 52 191 191 HOH HOH . J 3 HOH B 53 192 192 HOH HOH . J 3 HOH B 54 195 195 HOH HOH . J 3 HOH B 55 197 197 HOH HOH . K 3 HOH C 1 3 3 HOH HOH . K 3 HOH C 2 6 6 HOH HOH . K 3 HOH C 3 7 7 HOH HOH . K 3 HOH C 4 16 16 HOH HOH . K 3 HOH C 5 18 18 HOH HOH . K 3 HOH C 6 19 19 HOH HOH . K 3 HOH C 7 23 23 HOH HOH . K 3 HOH C 8 24 24 HOH HOH . K 3 HOH C 9 25 25 HOH HOH . K 3 HOH C 10 26 26 HOH HOH . K 3 HOH C 11 27 27 HOH HOH . K 3 HOH C 12 32 32 HOH HOH . K 3 HOH C 13 35 35 HOH HOH . K 3 HOH C 14 38 38 HOH HOH . K 3 HOH C 15 40 40 HOH HOH . K 3 HOH C 16 44 44 HOH HOH . K 3 HOH C 17 46 46 HOH HOH . K 3 HOH C 18 55 55 HOH HOH . K 3 HOH C 19 71 71 HOH HOH . K 3 HOH C 20 78 78 HOH HOH . K 3 HOH C 21 82 82 HOH HOH . K 3 HOH C 22 84 84 HOH HOH . K 3 HOH C 23 95 95 HOH HOH . K 3 HOH C 24 104 104 HOH HOH . K 3 HOH C 25 111 111 HOH HOH . K 3 HOH C 26 114 114 HOH HOH . K 3 HOH C 27 117 117 HOH HOH . K 3 HOH C 28 119 119 HOH HOH . K 3 HOH C 29 122 122 HOH HOH . K 3 HOH C 30 126 126 HOH HOH . K 3 HOH C 31 134 134 HOH HOH . K 3 HOH C 32 137 137 HOH HOH . K 3 HOH C 33 143 143 HOH HOH . K 3 HOH C 34 148 148 HOH HOH . K 3 HOH C 35 150 150 HOH HOH . K 3 HOH C 36 153 153 HOH HOH . K 3 HOH C 37 154 154 HOH HOH . K 3 HOH C 38 156 156 HOH HOH . K 3 HOH C 39 157 157 HOH HOH . K 3 HOH C 40 158 158 HOH HOH . K 3 HOH C 41 160 160 HOH HOH . K 3 HOH C 42 163 163 HOH HOH . K 3 HOH C 43 168 168 HOH HOH . K 3 HOH C 44 170 170 HOH HOH . K 3 HOH C 45 171 171 HOH HOH . K 3 HOH C 46 174 174 HOH HOH . K 3 HOH C 47 175 175 HOH HOH . K 3 HOH C 48 178 178 HOH HOH . K 3 HOH C 49 180 180 HOH HOH . K 3 HOH C 50 181 181 HOH HOH . K 3 HOH C 51 182 182 HOH HOH . K 3 HOH C 52 187 187 HOH HOH . L 3 HOH D 1 2 2 HOH HOH . L 3 HOH D 2 5 5 HOH HOH . L 3 HOH D 3 8 8 HOH HOH . L 3 HOH D 4 15 15 HOH HOH . L 3 HOH D 5 20 20 HOH HOH . L 3 HOH D 6 30 30 HOH HOH . L 3 HOH D 7 33 33 HOH HOH . L 3 HOH D 8 39 39 HOH HOH . L 3 HOH D 9 42 42 HOH HOH . L 3 HOH D 10 48 48 HOH HOH . L 3 HOH D 11 53 53 HOH HOH . L 3 HOH D 12 58 58 HOH HOH . L 3 HOH D 13 62 62 HOH HOH . L 3 HOH D 14 66 66 HOH HOH . L 3 HOH D 15 69 69 HOH HOH . L 3 HOH D 16 77 77 HOH HOH . L 3 HOH D 17 85 85 HOH HOH . L 3 HOH D 18 87 87 HOH HOH . L 3 HOH D 19 96 96 HOH HOH . L 3 HOH D 20 97 97 HOH HOH . L 3 HOH D 21 98 98 HOH HOH . L 3 HOH D 22 109 109 HOH HOH . L 3 HOH D 23 118 118 HOH HOH . L 3 HOH D 24 125 125 HOH HOH . L 3 HOH D 25 130 130 HOH HOH . L 3 HOH D 26 138 138 HOH HOH . L 3 HOH D 27 142 142 HOH HOH . L 3 HOH D 28 144 144 HOH HOH . L 3 HOH D 29 149 149 HOH HOH . L 3 HOH D 30 155 155 HOH HOH . L 3 HOH D 31 159 159 HOH HOH . L 3 HOH D 32 161 161 HOH HOH . L 3 HOH D 33 162 162 HOH HOH . L 3 HOH D 34 165 165 HOH HOH . L 3 HOH D 35 179 179 HOH HOH . L 3 HOH D 36 184 184 HOH HOH . L 3 HOH D 37 186 186 HOH HOH . L 3 HOH D 38 189 189 HOH HOH . L 3 HOH D 39 190 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . F 2 0.451 6.327 14.567 1 38.69 ? PG ATP 801 B 1 HETATM 2 O O1G ATP . . . F 2 0.447 7.562 13.7 1 36.14 ? O1G ATP 801 B 1 HETATM 3 O O2G ATP . . . F 2 -0.822 5.513 14.509 1 38.24 ? O2G ATP 801 B 1 HETATM 4 O O3G ATP . . . F 2 1.717 5.509 14.479 1 37.04 ? O3G ATP 801 B 1 HETATM 5 P PB ATP . . . F 2 0.656 6.157 17.407 1 39.79 ? PB ATP 801 B 1 HETATM 6 O O1B ATP . . . F 2 -0.696 5.823 17.997 1 40.11 ? O1B ATP 801 B 1 HETATM 7 O O2B ATP . . . F 2 1.693 5.081 17.194 1 40.46 ? O2B ATP 801 B 1 HETATM 8 O O3B ATP . . . F 2 0.421 6.973 16.044 1 39.89 ? O3B ATP 801 B 1 HETATM 9 P PA ATP . . . F 2 2.729 7.3 18.971 1 44.3 ? PA ATP 801 B 1 HETATM 10 O O1A ATP . . . F 2 3.773 6.922 17.946 1 44.15 ? O1A ATP 801 B 1 HETATM 11 O O2A ATP . . . F 2 2.613 6.491 20.231 1 44.78 ? O2A ATP 801 B 1 HETATM 12 O O3A ATP . . . F 2 1.287 7.364 18.264 1 42.92 ? O3A ATP 801 B 1 HETATM 13 O O5' ATP . . . F 2 2.931 8.847 19.376 1 46.33 ? O5' ATP 801 B 1 HETATM 14 C C5' ATP . . . F 2 2.035 9.51 20.271 1 48.36 ? C5' ATP 801 B 1 HETATM 15 C C4' ATP . . . F 2 2.524 10.927 20.586 1 49.73 ? C4' ATP 801 B 1 HETATM 16 O O4' ATP . . . F 2 3.901 10.902 20.972 1 50.76 ? O4' ATP 801 B 1 HETATM 17 C C3' ATP . . . F 2 2.439 11.868 19.389 1 50.23 ? C3' ATP 801 B 1 HETATM 18 O O3' ATP . . . F 2 2.059 13.178 19.839 1 49.08 ? O3' ATP 801 B 1 HETATM 19 C C2' ATP . . . F 2 3.852 11.929 18.848 1 50.81 ? C2' ATP 801 B 1 HETATM 20 O O2' ATP . . . F 2 4.126 13.167 18.186 1 51.48 ? O2' ATP 801 B 1 HETATM 21 C C1' ATP . . . F 2 4.692 11.721 20.1 1 51.89 ? C1' ATP 801 B 1 HETATM 22 N N9 ATP . . . F 2 5.968 11.03 19.807 1 52.81 ? N9 ATP 801 B 1 HETATM 23 C C8 ATP . . . F 2 6.109 9.831 19.202 1 52.74 ? C8 ATP 801 B 1 HETATM 24 N N7 ATP . . . F 2 7.417 9.488 19.1 1 52.67 ? N7 ATP 801 B 1 HETATM 25 C C5 ATP . . . F 2 8.134 10.479 19.657 1 52.58 ? C5 ATP 801 B 1 HETATM 26 C C6 ATP . . . F 2 9.57 10.761 19.882 1 52.89 ? C6 ATP 801 B 1 HETATM 27 N N6 ATP . . . F 2 10.519 9.877 19.479 1 52.75 ? N6 ATP 801 B 1 HETATM 28 N N1 ATP . . . F 2 9.896 11.928 20.503 1 52.83 ? N1 ATP 801 B 1 HETATM 29 C C2 ATP . . . F 2 8.968 12.815 20.909 1 52.44 ? C2 ATP 801 B 1 HETATM 30 N N3 ATP . . . F 2 7.647 12.617 20.732 1 53.41 ? N3 ATP 801 B 1 HETATM 31 C C4 ATP . . . F 2 7.177 11.495 20.122 1 53.01 ? C4 ATP 801 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #