data_2FH5
#
_model_server_result.job_id            XjqkzvuZ3NPRzvC53frDFg 
_model_server_result.datetime_utc      '2024-11-21 23:43:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2fh5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    2FH5 
#
_exptl.entry_id    2FH5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2FH5 
_cell.length_a            68.092 
_cell.length_b            118.348 
_cell.length_c            120.413 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2FH5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA octameric 8 software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2,3,4 
A,B,C,D,E,F 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 68.092 118.348 0 
3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 68.092 0 120.413 
4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 118.348 120.413 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 17 1_555 A SG CYS 34 A CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc1 B OG1 THR 21 B THR 76 1_555 C MG MG . B MG 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc2 B OG SER 38 B SER 93 1_555 C MG MG . B MG 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc3 C MG MG . B MG 270 1_555 D O2B GTP . B GTP 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc4 C MG MG . B MG 270 1_555 D O2G GTP . B GTP 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc5 C MG MG . B MG 270 1_555 F O HOH . B HOH 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc6 C MG MG . B MG 270 1_555 F O HOH . B HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 129 n n 
PG O2G GTP sing 130 n n 
PG O3G GTP sing 131 n n 
PG O3B GTP sing 132 n n 
O2G HOG2 GTP sing 133 n n 
O3G HOG3 GTP sing 134 n n 
O3B PB GTP sing 135 n n 
PB O1B GTP doub 136 n n 
PB O2B GTP sing 137 n n 
PB O3A GTP sing 138 n n 
O2B HOB2 GTP sing 139 n n 
O3A PA GTP sing 140 n n 
PA O1A GTP doub 141 n n 
PA O2A GTP sing 142 n n 
PA O5' GTP sing 143 n n 
O2A HOA2 GTP sing 144 n n 
O5' C5' GTP sing 145 n n 
C5' C4' GTP sing 146 n n 
C5' H5' GTP sing 147 n n 
C5' "H5''" GTP sing 148 n n 
C4' O4' GTP sing 149 n n 
C4' C3' GTP sing 150 n n 
C4' H4' GTP sing 151 n n 
O4' C1' GTP sing 152 n n 
C3' O3' GTP sing 153 n n 
C3' C2' GTP sing 154 n n 
C3' H3' GTP sing 155 n n 
O3' HO3' GTP sing 156 n n 
C2' O2' GTP sing 157 n n 
C2' C1' GTP sing 158 n n 
C2' H2' GTP sing 159 n n 
O2' HO2' GTP sing 160 n n 
C1' N9 GTP sing 161 n n 
C1' H1' GTP sing 162 n n 
N9 C8 GTP sing 163 n y 
N9 C4 GTP sing 164 n y 
C8 N7 GTP doub 165 n y 
C8 H8 GTP sing 166 n n 
N7 C5 GTP sing 167 n y 
C5 C6 GTP sing 168 n n 
C5 C4 GTP doub 169 n y 
C6 O6 GTP doub 170 n n 
C6 N1 GTP sing 171 n n 
N1 C2 GTP sing 172 n n 
N1 HN1 GTP sing 173 n n 
C2 N2 GTP sing 174 n n 
C2 N3 GTP doub 175 n n 
N2 HN21 GTP sing 176 n n 
N2 HN22 GTP sing 177 n n 
N3 C4 GTP sing 178 n n 
#
_atom_sites.entry_id                     2FH5 
_atom_sites.fract_transf_matrix[1][1]    0.014686 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00845 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008305 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MG B 1 270 201 MG MO2 . 
D 4 GTP B 1 301 301 GTP GTP . 
E 5 HOH A 1 177 1 HOH HOH . 
E 5 HOH A 2 178 2 HOH HOH . 
E 5 HOH A 3 179 4 HOH HOH . 
E 5 HOH A 4 180 5 HOH HOH . 
E 5 HOH A 5 181 7 HOH HOH . 
E 5 HOH A 6 182 8 HOH HOH . 
E 5 HOH A 7 183 9 HOH HOH . 
E 5 HOH A 8 184 19 HOH HOH . 
E 5 HOH A 9 185 22 HOH HOH . 
E 5 HOH A 10 186 23 HOH HOH . 
E 5 HOH A 11 187 24 HOH HOH . 
E 5 HOH A 12 188 26 HOH HOH . 
E 5 HOH A 13 189 28 HOH HOH . 
E 5 HOH A 14 190 30 HOH HOH . 
E 5 HOH A 15 191 31 HOH HOH . 
E 5 HOH A 16 192 33 HOH HOH . 
E 5 HOH A 17 193 34 HOH HOH . 
E 5 HOH A 18 194 35 HOH HOH . 
E 5 HOH A 19 195 44 HOH HOH . 
E 5 HOH A 20 196 46 HOH HOH . 
E 5 HOH A 21 197 47 HOH HOH . 
E 5 HOH A 22 198 49 HOH HOH . 
E 5 HOH A 23 199 52 HOH HOH . 
E 5 HOH A 24 200 59 HOH HOH . 
E 5 HOH A 25 201 60 HOH HOH . 
E 5 HOH A 26 202 61 HOH HOH . 
E 5 HOH A 27 203 63 HOH HOH . 
E 5 HOH A 28 204 66 HOH HOH . 
E 5 HOH A 29 205 67 HOH HOH . 
E 5 HOH A 30 206 71 HOH HOH . 
E 5 HOH A 31 207 74 HOH HOH . 
E 5 HOH A 32 208 78 HOH HOH . 
E 5 HOH A 33 209 81 HOH HOH . 
E 5 HOH A 34 210 82 HOH HOH . 
E 5 HOH A 35 211 83 HOH HOH . 
E 5 HOH A 36 212 85 HOH HOH . 
E 5 HOH A 37 213 86 HOH HOH . 
E 5 HOH A 38 214 87 HOH HOH . 
E 5 HOH A 39 215 88 HOH HOH . 
E 5 HOH A 40 216 91 HOH HOH . 
E 5 HOH A 41 217 92 HOH HOH . 
E 5 HOH A 42 218 93 HOH HOH . 
E 5 HOH A 43 219 94 HOH HOH . 
E 5 HOH A 44 220 95 HOH HOH . 
E 5 HOH A 45 221 96 HOH HOH . 
E 5 HOH A 46 222 98 HOH HOH . 
E 5 HOH A 47 223 100 HOH HOH . 
E 5 HOH A 48 224 102 HOH HOH . 
E 5 HOH A 49 225 103 HOH HOH . 
F 5 HOH B 1 302 3 HOH HOH . 
F 5 HOH B 2 303 6 HOH HOH . 
F 5 HOH B 3 304 10 HOH HOH . 
F 5 HOH B 4 305 11 HOH HOH . 
F 5 HOH B 5 306 12 HOH HOH . 
F 5 HOH B 6 307 13 HOH HOH . 
F 5 HOH B 7 308 14 HOH HOH . 
F 5 HOH B 8 309 15 HOH HOH . 
F 5 HOH B 9 310 16 HOH HOH . 
F 5 HOH B 10 311 17 HOH HOH . 
F 5 HOH B 11 312 18 HOH HOH . 
F 5 HOH B 12 313 20 HOH HOH . 
F 5 HOH B 13 314 21 HOH HOH . 
F 5 HOH B 14 315 25 HOH HOH . 
F 5 HOH B 15 316 27 HOH HOH . 
F 5 HOH B 16 317 29 HOH HOH . 
F 5 HOH B 17 318 32 HOH HOH . 
F 5 HOH B 18 319 36 HOH HOH . 
F 5 HOH B 19 320 37 HOH HOH . 
F 5 HOH B 20 321 38 HOH HOH . 
F 5 HOH B 21 322 39 HOH HOH . 
F 5 HOH B 22 323 40 HOH HOH . 
F 5 HOH B 23 324 41 HOH HOH . 
F 5 HOH B 24 325 42 HOH HOH . 
F 5 HOH B 25 326 43 HOH HOH . 
F 5 HOH B 26 327 45 HOH HOH . 
F 5 HOH B 27 328 48 HOH HOH . 
F 5 HOH B 28 329 50 HOH HOH . 
F 5 HOH B 29 330 51 HOH HOH . 
F 5 HOH B 30 331 53 HOH HOH . 
F 5 HOH B 31 332 54 HOH HOH . 
F 5 HOH B 32 333 55 HOH HOH . 
F 5 HOH B 33 334 56 HOH HOH . 
F 5 HOH B 34 335 57 HOH HOH . 
F 5 HOH B 35 336 58 HOH HOH . 
F 5 HOH B 36 337 62 HOH HOH . 
F 5 HOH B 37 338 64 HOH HOH . 
F 5 HOH B 38 339 65 HOH HOH . 
F 5 HOH B 39 340 68 HOH HOH . 
F 5 HOH B 40 341 69 HOH HOH . 
F 5 HOH B 41 342 70 HOH HOH . 
F 5 HOH B 42 343 72 HOH HOH . 
F 5 HOH B 43 344 73 HOH HOH . 
F 5 HOH B 44 345 75 HOH HOH . 
F 5 HOH B 45 346 76 HOH HOH . 
F 5 HOH B 46 347 77 HOH HOH . 
F 5 HOH B 47 348 79 HOH HOH . 
F 5 HOH B 48 349 80 HOH HOH . 
F 5 HOH B 49 350 84 HOH HOH . 
F 5 HOH B 50 351 89 HOH HOH . 
F 5 HOH B 51 352 90 HOH HOH . 
F 5 HOH B 52 353 97 HOH HOH . 
F 5 HOH B 53 354 99 HOH HOH . 
F 5 HOH B 54 355 101 HOH HOH . 
F 5 HOH B 55 356 104 HOH HOH . 
F 5 HOH B 56 357 201 HOH MO2 . 
F 5 HOH B 57 358 201 HOH MO2 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . D 4 30.497 45.332 33.156 1 36 ? PG GTP 301 B 1 
HETATM 2 O O1G GTP . . . D 4 31.409 45.651 34.239 1 39.61 ? O1G GTP 301 B 1 
HETATM 3 O O2G GTP . . . D 4 29.084 45.722 33.444 1 37.02 ? O2G GTP 301 B 1 
HETATM 4 O O3G GTP . . . D 4 30.605 43.84 32.773 1 49.85 ? O3G GTP 301 B 1 
HETATM 5 O O3B GTP . . . D 4 31.064 46.345 31.879 1 40.04 ? O3B GTP 301 B 1 
HETATM 6 P PB GTP . . . D 4 30.47 46.447 30.471 1 38.06 ? PB GTP 301 B 1 
HETATM 7 O O1B GTP . . . D 4 31.141 45.48 29.551 1 41.06 ? O1B GTP 301 B 1 
HETATM 8 O O2B GTP . . . D 4 28.961 46.311 30.42 1 40.34 ? O2B GTP 301 B 1 
HETATM 9 O O3A GTP . . . D 4 30.972 47.916 30.093 1 39.75 ? O3A GTP 301 B 1 
HETATM 10 P PA GTP . . . D 4 30.142 49.176 29.643 1 36.81 ? PA GTP 301 B 1 
HETATM 11 O O1A GTP . . . D 4 29.227 48.878 28.586 1 36.06 ? O1A GTP 301 B 1 
HETATM 12 O O2A GTP . . . D 4 29.469 49.806 30.831 1 34.64 ? O2A GTP 301 B 1 
HETATM 13 O O5' GTP . . . D 4 31.35 50.016 29.056 1 35 ? O5' GTP 301 B 1 
HETATM 14 C C5' GTP . . . D 4 32.377 50.425 29.943 1 33.36 ? C5' GTP 301 B 1 
HETATM 15 C C4' GTP . . . D 4 32.899 51.795 29.512 1 33.45 ? C4' GTP 301 B 1 
HETATM 16 O O4' GTP . . . D 4 33.44 51.745 28.174 1 34.43 ? O4' GTP 301 B 1 
HETATM 17 C C3' GTP . . . D 4 31.825 52.886 29.455 1 38.55 ? C3' GTP 301 B 1 
HETATM 18 O O3' GTP . . . D 4 32.35 54.156 29.937 1 44.29 ? O3' GTP 301 B 1 
HETATM 19 C C2' GTP . . . D 4 31.465 52.935 27.998 1 38.28 ? C2' GTP 301 B 1 
HETATM 20 O O2' GTP . . . D 4 30.79 54.134 27.565 1 39.69 ? O2' GTP 301 B 1 
HETATM 21 C C1' GTP . . . D 4 32.794 52.661 27.293 1 35.12 ? C1' GTP 301 B 1 
HETATM 22 N N9 GTP . . . D 4 32.673 51.99 26.011 1 42.72 ? N9 GTP 301 B 1 
HETATM 23 C C8 GTP . . . D 4 31.895 50.86 25.735 1 39.5 ? C8 GTP 301 B 1 
HETATM 24 N N7 GTP . . . D 4 32.025 50.509 24.458 1 44.55 ? N7 GTP 301 B 1 
HETATM 25 C C5 GTP . . . D 4 32.917 51.435 23.875 1 45.67 ? C5 GTP 301 B 1 
HETATM 26 C C6 GTP . . . D 4 33.448 51.589 22.581 1 44.49 ? C6 GTP 301 B 1 
HETATM 27 O O6 GTP . . . D 4 33.267 50.921 21.581 1 45.32 ? O6 GTP 301 B 1 
HETATM 28 N N1 GTP . . . D 4 34.338 52.676 22.365 1 43.92 ? N1 GTP 301 B 1 
HETATM 29 C C2 GTP . . . D 4 34.691 53.569 23.36 1 43.05 ? C2 GTP 301 B 1 
HETATM 30 N N2 GTP . . . D 4 35.536 54.594 23.061 1 36.06 ? N2 GTP 301 B 1 
HETATM 31 N N3 GTP . . . D 4 34.181 53.408 24.61 1 44.6 ? N3 GTP 301 B 1 
HETATM 32 C C4 GTP . . . D 4 33.304 52.356 24.851 1 43.84 ? C4 GTP 301 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           32 
#