data_2FIB # _model_server_result.job_id ITG5J5Kc2y8PJqEaHrBZzA _model_server_result.datetime_utc '2025-03-13 17:52:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":412}' # _entry.id 2FIB # _exptl.entry_id 2FIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.02 _cell.angle_gamma 90 _cell.entry_id 2FIB _cell.length_a 37.33 _cell.length_b 68.2 _cell.length_c 47.6 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 153 1_555 A SG CYS 40 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 184 A CYS 326 1_555 A SG CYS 197 A CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc1 A OD2 ASP 176 A ASP 318 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc2 A OD1 ASP 176 A ASP 318 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc3 A OD1 ASP 178 A ASP 320 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc4 A O PHE 180 A PHE 322 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc5 A O GLY 182 A GLY 324 1_555 C CA CA . A CA 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc6 C CA CA . A CA 412 1_555 D O HOH . A HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc7 C CA CA . A CA 412 1_555 D O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2FIB _atom_sites.fract_transf_matrix[1][1] 0.026788 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007188 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014663 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021752 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 412 400 CA CA . D 4 HOH A 1 413 401 HOH HOH . D 4 HOH A 2 414 402 HOH HOH . D 4 HOH A 3 415 403 HOH HOH . D 4 HOH A 4 416 404 HOH HOH . D 4 HOH A 5 417 405 HOH HOH . D 4 HOH A 6 418 406 HOH HOH . D 4 HOH A 7 419 407 HOH HOH . D 4 HOH A 8 420 408 HOH HOH . D 4 HOH A 9 421 409 HOH HOH . D 4 HOH A 10 422 410 HOH HOH . D 4 HOH A 11 423 411 HOH HOH . D 4 HOH A 12 424 412 HOH HOH . D 4 HOH A 13 425 413 HOH HOH . D 4 HOH A 14 426 414 HOH HOH . D 4 HOH A 15 427 415 HOH HOH . D 4 HOH A 16 428 416 HOH HOH . D 4 HOH A 17 429 417 HOH HOH . D 4 HOH A 18 430 418 HOH HOH . D 4 HOH A 19 431 419 HOH HOH . D 4 HOH A 20 432 420 HOH HOH . D 4 HOH A 21 433 421 HOH HOH . D 4 HOH A 22 434 422 HOH HOH . D 4 HOH A 23 435 423 HOH HOH . D 4 HOH A 24 436 424 HOH HOH . D 4 HOH A 25 437 425 HOH HOH . D 4 HOH A 26 438 426 HOH HOH . D 4 HOH A 27 439 427 HOH HOH . D 4 HOH A 28 440 428 HOH HOH . D 4 HOH A 29 441 429 HOH HOH . D 4 HOH A 30 442 430 HOH HOH . D 4 HOH A 31 443 431 HOH HOH . D 4 HOH A 32 444 432 HOH HOH . D 4 HOH A 33 445 433 HOH HOH . D 4 HOH A 34 446 434 HOH HOH . D 4 HOH A 35 447 435 HOH HOH . D 4 HOH A 36 448 436 HOH HOH . D 4 HOH A 37 449 437 HOH HOH . D 4 HOH A 38 450 438 HOH HOH . D 4 HOH A 39 451 439 HOH HOH . D 4 HOH A 40 452 441 HOH HOH . D 4 HOH A 41 453 442 HOH HOH . D 4 HOH A 42 454 443 HOH HOH . D 4 HOH A 43 455 444 HOH HOH . D 4 HOH A 44 456 445 HOH HOH . D 4 HOH A 45 457 446 HOH HOH . D 4 HOH A 46 458 447 HOH HOH . D 4 HOH A 47 459 448 HOH HOH . D 4 HOH A 48 460 449 HOH HOH . D 4 HOH A 49 461 450 HOH HOH . D 4 HOH A 50 462 451 HOH HOH . D 4 HOH A 51 463 452 HOH HOH . D 4 HOH A 52 464 453 HOH HOH . D 4 HOH A 53 465 454 HOH HOH . D 4 HOH A 54 466 455 HOH HOH . D 4 HOH A 55 467 456 HOH HOH . D 4 HOH A 56 468 457 HOH HOH . D 4 HOH A 57 469 458 HOH HOH . D 4 HOH A 58 470 459 HOH HOH . D 4 HOH A 59 471 460 HOH HOH . D 4 HOH A 60 472 461 HOH HOH . D 4 HOH A 61 473 462 HOH HOH . D 4 HOH A 62 474 463 HOH HOH . D 4 HOH A 63 475 464 HOH HOH . D 4 HOH A 64 476 465 HOH HOH . D 4 HOH A 65 477 466 HOH HOH . D 4 HOH A 66 478 467 HOH HOH . D 4 HOH A 67 479 468 HOH HOH . D 4 HOH A 68 480 469 HOH HOH . D 4 HOH A 69 481 470 HOH HOH . D 4 HOH A 70 482 471 HOH HOH . D 4 HOH A 71 483 472 HOH HOH . D 4 HOH A 72 484 473 HOH HOH . D 4 HOH A 73 485 474 HOH HOH . D 4 HOH A 74 486 475 HOH HOH . D 4 HOH A 75 487 476 HOH HOH . D 4 HOH A 76 488 477 HOH HOH . D 4 HOH A 77 489 478 HOH HOH . D 4 HOH A 78 490 479 HOH HOH . D 4 HOH A 79 491 480 HOH HOH . D 4 HOH A 80 492 481 HOH HOH . D 4 HOH A 81 493 482 HOH HOH . D 4 HOH A 82 494 483 HOH HOH . D 4 HOH A 83 495 484 HOH HOH . D 4 HOH A 84 496 485 HOH HOH . D 4 HOH A 85 497 486 HOH HOH . D 4 HOH A 86 498 487 HOH HOH . D 4 HOH A 87 499 488 HOH HOH . D 4 HOH A 88 500 489 HOH HOH . D 4 HOH A 89 501 490 HOH HOH . D 4 HOH A 90 502 491 HOH HOH . D 4 HOH A 91 503 492 HOH HOH . D 4 HOH A 92 504 493 HOH HOH . D 4 HOH A 93 505 494 HOH HOH . D 4 HOH A 94 506 495 HOH HOH . D 4 HOH A 95 507 496 HOH HOH . D 4 HOH A 96 508 497 HOH HOH . D 4 HOH A 97 509 498 HOH HOH . D 4 HOH A 98 510 499 HOH HOH . D 4 HOH A 99 511 500 HOH HOH . D 4 HOH A 100 512 501 HOH HOH . D 4 HOH A 101 513 502 HOH HOH . D 4 HOH A 102 514 503 HOH HOH . D 4 HOH A 103 515 504 HOH HOH . D 4 HOH A 104 516 505 HOH HOH . D 4 HOH A 105 517 506 HOH HOH . D 4 HOH A 106 518 507 HOH HOH . D 4 HOH A 107 519 508 HOH HOH . D 4 HOH A 108 520 509 HOH HOH . D 4 HOH A 109 521 510 HOH HOH . D 4 HOH A 110 522 511 HOH HOH . D 4 HOH A 111 523 512 HOH HOH . D 4 HOH A 112 524 513 HOH HOH . D 4 HOH A 113 525 514 HOH HOH . D 4 HOH A 114 526 515 HOH HOH . E 4 HOH B 1 440 440 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -1.062 _atom_site.Cartn_y 24.954 _atom_site.Cartn_z 13.851 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 412 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #