data_2FIJ # _model_server_result.job_id hSWjmT3qW3FTYYDcHZMGlA _model_server_result.datetime_utc '2025-03-05 19:25:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fij # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2213}' # _entry.id 2FIJ # _exptl.entry_id 2FIJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 161.116 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT HEXAMMINE(III)' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2FIJ _cell.length_a 32.277 _cell.length_b 32.469 _cell.length_c 66.749 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FIJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DT 4 A DT 4 1_555 A P A2M 5 A A2M 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.64 ? covale ? covale2 A O3' A2M 5 A A2M 5 1_555 A P UAR 6 A UAR 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.618 ? covale ? covale3 A O3' UAR 6 A UAR 6 1_555 A P DA 7 A DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? covale ? covale4 B O3' DT 4 B DT 14 1_555 B P A2M 5 B A2M 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.629 ? covale ? covale5 B O3' A2M 5 B A2M 15 1_555 B P UAR 6 B UAR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.628 ? covale ? covale6 B O3' UAR 6 B UAR 16 1_555 B P DA 7 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.836 ? hydrog WATSON-CRICK hydrog1 A N1 DG 1 A DG 1 1_555 B N3 DC 10 B DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 1 A DG 1 1_555 B O2 DC 10 B DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 1 A DG 1 1_555 B N4 DC 10 B DC 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 B N1 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 B O6 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 B N2 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DG 3 A DG 3 1_555 B N3 DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 DG 3 A DG 3 1_555 B O2 DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 DG 3 A DG 3 1_555 B N4 DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N3 DT 4 A DT 4 1_555 B N1 DA 7 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O4 DT 4 A DT 4 1_555 B N6 DA 7 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 A2M 5 A A2M 5 1_555 B N3 UAR 6 B UAR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 A2M 5 A A2M 5 1_555 B O4 UAR 6 B UAR 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 UAR 6 A UAR 6 1_555 B N1 A2M 5 B A2M 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O4 UAR 6 A UAR 6 1_555 B N6 A2M 5 B A2M 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DA 7 A DA 7 1_555 B N3 DT 4 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N6 DA 7 A DA 7 1_555 B O4 DT 4 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N3 DC 8 A DC 8 1_555 B N1 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N4 DC 8 A DC 8 1_555 B O6 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O2 DC 8 A DC 8 1_555 B N2 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DG 9 A DG 9 1_555 B N3 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N2 DG 9 A DG 9 1_555 B O2 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O6 DG 9 A DG 9 1_555 B N4 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 DC 10 A DC 10 1_555 B N1 DG 1 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N4 DC 10 A DC 10 1_555 B O6 DG 1 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O2 DC 10 A DC 10 1_555 B N2 DG 1 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co H18 N6 3' _chem_comp.formula_weight 161.116 _chem_comp.id NCO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT HEXAMMINE(III)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CO N1 NCO sing 194 n n CO N2 NCO sing 195 n n CO N3 NCO sing 196 n n CO N4 NCO sing 197 n n CO N5 NCO sing 198 n n CO N6 NCO sing 199 n n N1 HN11 NCO sing 200 n n N1 HN12 NCO sing 201 n n N1 HN13 NCO sing 202 n n N2 HN21 NCO sing 203 n n N2 HN22 NCO sing 204 n n N2 HN23 NCO sing 205 n n N3 HN31 NCO sing 206 n n N3 HN32 NCO sing 207 n n N3 HN33 NCO sing 208 n n N4 HN41 NCO sing 209 n n N4 HN42 NCO sing 210 n n N4 HN43 NCO sing 211 n n N5 HN51 NCO sing 212 n n N5 HN52 NCO sing 213 n n N5 HN53 NCO sing 214 n n N6 HN61 NCO sing 215 n n N6 HN62 NCO sing 216 n n N6 HN63 NCO sing 217 n n # _atom_sites.entry_id 2FIJ _atom_sites.fract_transf_matrix[1][1] 0.030982 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014981 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 101 101 CL CL . D 3 NCO A 1 2211 2211 NCO NCO . E 3 NCO A 1 2213 2213 NCO NCO . F 3 NCO B 1 2212 2212 NCO NCO . G 4 HOH A 1 102 102 HOH HOH . G 4 HOH A 2 103 103 HOH HOH . G 4 HOH A 3 106 106 HOH HOH . G 4 HOH A 4 109 109 HOH HOH . G 4 HOH A 5 110 110 HOH HOH . G 4 HOH A 6 112 112 HOH HOH . G 4 HOH A 7 117 117 HOH HOH . G 4 HOH A 8 119 119 HOH HOH . G 4 HOH A 9 122 122 HOH HOH . G 4 HOH A 10 123 123 HOH HOH . G 4 HOH A 11 124 124 HOH HOH . G 4 HOH A 12 125 125 HOH HOH . G 4 HOH A 13 126 126 HOH HOH . G 4 HOH A 14 128 128 HOH HOH . G 4 HOH A 15 129 129 HOH HOH . G 4 HOH A 16 131 131 HOH HOH . G 4 HOH A 17 132 132 HOH HOH . G 4 HOH A 18 133 133 HOH HOH . G 4 HOH A 19 134 134 HOH HOH . G 4 HOH A 20 135 135 HOH HOH . G 4 HOH A 21 136 136 HOH HOH . G 4 HOH A 22 137 137 HOH HOH . G 4 HOH A 23 138 138 HOH HOH . G 4 HOH A 24 139 139 HOH HOH . G 4 HOH A 25 140 140 HOH HOH . G 4 HOH A 26 146 146 HOH HOH . G 4 HOH A 27 154 154 HOH HOH . G 4 HOH A 28 155 155 HOH HOH . G 4 HOH A 29 156 156 HOH HOH . G 4 HOH A 30 157 157 HOH HOH . G 4 HOH A 31 160 160 HOH HOH . G 4 HOH A 32 161 161 HOH HOH . G 4 HOH A 33 162 162 HOH HOH . G 4 HOH A 34 164 164 HOH HOH . G 4 HOH A 35 166 166 HOH HOH . G 4 HOH A 36 167 167 HOH HOH . G 4 HOH A 37 171 171 HOH HOH . G 4 HOH A 38 172 172 HOH HOH . G 4 HOH A 39 175 175 HOH HOH . G 4 HOH A 40 182 182 HOH HOH . G 4 HOH A 41 183 183 HOH HOH . G 4 HOH A 42 186 186 HOH HOH . G 4 HOH A 43 187 187 HOH HOH . G 4 HOH A 44 189 189 HOH HOH . G 4 HOH A 45 191 191 HOH HOH . G 4 HOH A 46 192 192 HOH HOH . G 4 HOH A 47 193 193 HOH HOH . G 4 HOH A 48 194 194 HOH HOH . G 4 HOH A 49 196 196 HOH HOH . G 4 HOH A 50 197 197 HOH HOH . G 4 HOH A 51 203 203 HOH HOH . G 4 HOH A 52 208 208 HOH HOH . G 4 HOH A 53 214 214 HOH HOH . G 4 HOH A 54 215 215 HOH HOH . G 4 HOH A 55 216 216 HOH HOH . G 4 HOH A 56 217 217 HOH HOH . G 4 HOH A 57 218 218 HOH HOH . G 4 HOH A 58 219 219 HOH HOH . G 4 HOH A 59 220 220 HOH HOH . G 4 HOH A 60 221 221 HOH HOH . G 4 HOH A 61 224 224 HOH HOH . G 4 HOH A 62 226 226 HOH HOH . G 4 HOH A 63 227 227 HOH HOH . H 4 HOH B 1 104 104 HOH HOH . H 4 HOH B 2 105 105 HOH HOH . H 4 HOH B 3 107 107 HOH HOH . H 4 HOH B 4 108 108 HOH HOH . H 4 HOH B 5 111 111 HOH HOH . H 4 HOH B 6 113 113 HOH HOH . H 4 HOH B 7 114 114 HOH HOH . H 4 HOH B 8 115 115 HOH HOH . H 4 HOH B 9 116 116 HOH HOH . H 4 HOH B 10 118 118 HOH HOH . H 4 HOH B 11 120 120 HOH HOH . H 4 HOH B 12 121 121 HOH HOH . H 4 HOH B 13 127 127 HOH HOH . H 4 HOH B 14 130 130 HOH HOH . H 4 HOH B 15 141 141 HOH HOH . H 4 HOH B 16 142 142 HOH HOH . H 4 HOH B 17 143 143 HOH HOH . H 4 HOH B 18 144 144 HOH HOH . H 4 HOH B 19 145 145 HOH HOH . H 4 HOH B 20 147 147 HOH HOH . H 4 HOH B 21 148 148 HOH HOH . H 4 HOH B 22 149 149 HOH HOH . H 4 HOH B 23 150 150 HOH HOH . H 4 HOH B 24 151 151 HOH HOH . H 4 HOH B 25 152 152 HOH HOH . H 4 HOH B 26 153 153 HOH HOH . H 4 HOH B 27 158 158 HOH HOH . H 4 HOH B 28 159 159 HOH HOH . H 4 HOH B 29 163 163 HOH HOH . H 4 HOH B 30 165 165 HOH HOH . H 4 HOH B 31 168 168 HOH HOH . H 4 HOH B 32 169 169 HOH HOH . H 4 HOH B 33 170 170 HOH HOH . H 4 HOH B 34 173 173 HOH HOH . H 4 HOH B 35 174 174 HOH HOH . H 4 HOH B 36 176 176 HOH HOH . H 4 HOH B 37 177 177 HOH HOH . H 4 HOH B 38 178 178 HOH HOH . H 4 HOH B 39 179 179 HOH HOH . H 4 HOH B 40 180 180 HOH HOH . H 4 HOH B 41 181 181 HOH HOH . H 4 HOH B 42 184 184 HOH HOH . H 4 HOH B 43 185 185 HOH HOH . H 4 HOH B 44 188 188 HOH HOH . H 4 HOH B 45 190 190 HOH HOH . H 4 HOH B 46 195 195 HOH HOH . H 4 HOH B 47 198 198 HOH HOH . H 4 HOH B 48 199 199 HOH HOH . H 4 HOH B 49 200 200 HOH HOH . H 4 HOH B 50 201 201 HOH HOH . H 4 HOH B 51 202 202 HOH HOH . H 4 HOH B 52 204 204 HOH HOH . H 4 HOH B 53 205 205 HOH HOH . H 4 HOH B 54 206 206 HOH HOH . H 4 HOH B 55 207 207 HOH HOH . H 4 HOH B 56 209 209 HOH HOH . H 4 HOH B 57 210 210 HOH HOH . H 4 HOH B 58 211 211 HOH HOH . H 4 HOH B 59 212 212 HOH HOH . H 4 HOH B 60 213 213 HOH HOH . H 4 HOH B 61 222 222 HOH HOH . H 4 HOH B 62 223 223 HOH HOH . H 4 HOH B 63 225 225 HOH HOH . H 4 HOH B 64 228 228 HOH HOH . H 4 HOH B 65 229 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CO CO NCO . . . E 3 30.368 22.476 22.347 1 14.17 ? CO NCO 2213 A 1 HETATM 2 N N1 NCO . . . E 3 32.137 23.351 22.566 1 17.74 ? N1 NCO 2213 A 1 HETATM 3 N N2 NCO . . . E 3 29.567 24.257 22.006 1 15.68 ? N2 NCO 2213 A 1 HETATM 4 N N3 NCO . . . E 3 28.607 21.589 22.147 1 18.9 ? N3 NCO 2213 A 1 HETATM 5 N N4 NCO . . . E 3 31.195 20.71 22.716 1 19.37 ? N4 NCO 2213 A 1 HETATM 6 N N5 NCO . . . E 3 30.051 22.681 24.299 1 17.61 ? N5 NCO 2213 A 1 HETATM 7 N N6 NCO . . . E 3 30.748 22.224 20.425 1 17.41 ? N6 NCO 2213 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 198 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #