data_2FK8 # _model_server_result.job_id HvIrpLNBvMkekBz5d8WiTQ _model_server_result.datetime_utc '2025-03-13 21:55:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fk8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":302}' # _entry.id 2FK8 # _exptl.entry_id 2FK8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.437 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-ADENOSYLMETHIONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2FK8 _cell.length_a 56.779 _cell.length_b 56.779 _cell.length_c 199.035 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FK8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H22 N6 O5 S' _chem_comp.formula_weight 398.437 _chem_comp.id SAM _chem_comp.mon_nstd_flag . _chem_comp.name S-ADENOSYLMETHIONINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SAM sing 277 n n N HN1 SAM sing 278 n n N HN2 SAM sing 279 n n CA C SAM sing 280 n n CA CB SAM sing 281 n n CA HA SAM sing 282 n n C O SAM doub 283 n n C OXT SAM sing 284 n n CB CG SAM sing 285 n n CB HB1 SAM sing 286 n n CB HB2 SAM sing 287 n n CG SD SAM sing 288 n n CG HG1 SAM sing 289 n n CG HG2 SAM sing 290 n n SD CE SAM sing 291 n n SD C5' SAM sing 292 n n CE HE1 SAM sing 293 n n CE HE2 SAM sing 294 n n CE HE3 SAM sing 295 n n C5' C4' SAM sing 296 n n C5' "H5'1" SAM sing 297 n n C5' "H5'2" SAM sing 298 n n C4' O4' SAM sing 299 n n C4' C3' SAM sing 300 n n C4' H4' SAM sing 301 n n O4' C1' SAM sing 302 n n C3' O3' SAM sing 303 n n C3' C2' SAM sing 304 n n C3' H3' SAM sing 305 n n O3' HO3' SAM sing 306 n n C2' O2' SAM sing 307 n n C2' C1' SAM sing 308 n n C2' H2' SAM sing 309 n n O2' HO2' SAM sing 310 n n C1' N9 SAM sing 311 n n C1' H1' SAM sing 312 n n N9 C8 SAM sing 313 n y N9 C4 SAM sing 314 n y C8 N7 SAM doub 315 n y C8 H8 SAM sing 316 n n N7 C5 SAM sing 317 n y C5 C6 SAM sing 318 n y C5 C4 SAM doub 319 n y C6 N6 SAM sing 320 n n C6 N1 SAM doub 321 n y N6 HN61 SAM sing 322 n n N6 HN62 SAM sing 323 n n N1 C2 SAM sing 324 n y C2 N3 SAM doub 325 n y C2 H2 SAM sing 326 n n N3 C4 SAM sing 327 n y # _atom_sites.entry_id 2FK8 _atom_sites.fract_transf_matrix[1][1] 0.017612 _atom_sites.fract_transf_matrix[1][2] 0.010168 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAM A 1 302 1 SAM SAM . C 3 HOH A 1 303 1 HOH HOH . C 3 HOH A 2 304 2 HOH HOH . C 3 HOH A 3 305 3 HOH HOH . C 3 HOH A 4 306 4 HOH HOH . C 3 HOH A 5 307 5 HOH HOH . C 3 HOH A 6 308 6 HOH HOH . C 3 HOH A 7 309 7 HOH HOH . C 3 HOH A 8 310 8 HOH HOH . C 3 HOH A 9 311 9 HOH HOH . C 3 HOH A 10 312 10 HOH HOH . C 3 HOH A 11 313 11 HOH HOH . C 3 HOH A 12 314 12 HOH HOH . C 3 HOH A 13 315 13 HOH HOH . C 3 HOH A 14 316 14 HOH HOH . C 3 HOH A 15 317 15 HOH HOH . C 3 HOH A 16 318 16 HOH HOH . C 3 HOH A 17 319 17 HOH HOH . C 3 HOH A 18 320 18 HOH HOH . C 3 HOH A 19 321 19 HOH HOH . C 3 HOH A 20 322 20 HOH HOH . C 3 HOH A 21 323 21 HOH HOH . C 3 HOH A 22 324 22 HOH HOH . C 3 HOH A 23 325 23 HOH HOH . C 3 HOH A 24 326 24 HOH HOH . C 3 HOH A 25 327 25 HOH HOH . C 3 HOH A 26 328 26 HOH HOH . C 3 HOH A 27 329 27 HOH HOH . C 3 HOH A 28 330 28 HOH HOH . C 3 HOH A 29 331 29 HOH HOH . C 3 HOH A 30 332 30 HOH HOH . C 3 HOH A 31 333 31 HOH HOH . C 3 HOH A 32 334 32 HOH HOH . C 3 HOH A 33 335 33 HOH HOH . C 3 HOH A 34 336 34 HOH HOH . C 3 HOH A 35 337 35 HOH HOH . C 3 HOH A 36 338 36 HOH HOH . C 3 HOH A 37 339 37 HOH HOH . C 3 HOH A 38 340 38 HOH HOH . C 3 HOH A 39 341 39 HOH HOH . C 3 HOH A 40 342 40 HOH HOH . C 3 HOH A 41 343 41 HOH HOH . C 3 HOH A 42 344 42 HOH HOH . C 3 HOH A 43 345 43 HOH HOH . C 3 HOH A 44 346 44 HOH HOH . C 3 HOH A 45 347 45 HOH HOH . C 3 HOH A 46 348 46 HOH HOH . C 3 HOH A 47 349 47 HOH HOH . C 3 HOH A 48 350 48 HOH HOH . C 3 HOH A 49 351 49 HOH HOH . C 3 HOH A 50 352 50 HOH HOH . C 3 HOH A 51 353 51 HOH HOH . C 3 HOH A 52 354 52 HOH HOH . C 3 HOH A 53 355 53 HOH HOH . C 3 HOH A 54 356 54 HOH HOH . C 3 HOH A 55 357 55 HOH HOH . C 3 HOH A 56 358 56 HOH HOH . C 3 HOH A 57 359 57 HOH HOH . C 3 HOH A 58 360 58 HOH HOH . C 3 HOH A 59 361 59 HOH HOH . C 3 HOH A 60 362 60 HOH HOH . C 3 HOH A 61 363 61 HOH HOH . C 3 HOH A 62 364 62 HOH HOH . C 3 HOH A 63 365 63 HOH HOH . C 3 HOH A 64 366 64 HOH HOH . C 3 HOH A 65 367 65 HOH HOH . C 3 HOH A 66 368 66 HOH HOH . C 3 HOH A 67 369 67 HOH HOH . C 3 HOH A 68 370 68 HOH HOH . C 3 HOH A 69 371 69 HOH HOH . C 3 HOH A 70 372 70 HOH HOH . C 3 HOH A 71 373 71 HOH HOH . C 3 HOH A 72 374 72 HOH HOH . C 3 HOH A 73 375 73 HOH HOH . C 3 HOH A 74 376 74 HOH HOH . C 3 HOH A 75 377 75 HOH HOH . C 3 HOH A 76 378 76 HOH HOH . C 3 HOH A 77 379 77 HOH HOH . C 3 HOH A 78 380 78 HOH HOH . C 3 HOH A 79 381 79 HOH HOH . C 3 HOH A 80 382 80 HOH HOH . C 3 HOH A 81 383 81 HOH HOH . C 3 HOH A 82 384 82 HOH HOH . C 3 HOH A 83 385 83 HOH HOH . C 3 HOH A 84 386 84 HOH HOH . C 3 HOH A 85 387 85 HOH HOH . C 3 HOH A 86 388 86 HOH HOH . C 3 HOH A 87 389 87 HOH HOH . C 3 HOH A 88 390 88 HOH HOH . C 3 HOH A 89 391 89 HOH HOH . C 3 HOH A 90 392 90 HOH HOH . C 3 HOH A 91 393 91 HOH HOH . C 3 HOH A 92 394 92 HOH HOH . C 3 HOH A 93 395 93 HOH HOH . C 3 HOH A 94 396 94 HOH HOH . C 3 HOH A 95 397 95 HOH HOH . C 3 HOH A 96 398 96 HOH HOH . C 3 HOH A 97 399 97 HOH HOH . C 3 HOH A 98 400 98 HOH HOH . C 3 HOH A 99 401 99 HOH HOH . C 3 HOH A 100 402 100 HOH HOH . C 3 HOH A 101 403 101 HOH HOH . C 3 HOH A 102 404 102 HOH HOH . C 3 HOH A 103 405 103 HOH HOH . C 3 HOH A 104 406 104 HOH HOH . C 3 HOH A 105 407 105 HOH HOH . C 3 HOH A 106 408 106 HOH HOH . C 3 HOH A 107 409 107 HOH HOH . C 3 HOH A 108 410 108 HOH HOH . C 3 HOH A 109 411 109 HOH HOH . C 3 HOH A 110 412 110 HOH HOH . C 3 HOH A 111 413 111 HOH HOH . C 3 HOH A 112 414 112 HOH HOH . C 3 HOH A 113 415 113 HOH HOH . C 3 HOH A 114 416 114 HOH HOH . C 3 HOH A 115 417 115 HOH HOH . C 3 HOH A 116 418 116 HOH HOH . C 3 HOH A 117 419 117 HOH HOH . C 3 HOH A 118 420 118 HOH HOH . C 3 HOH A 119 421 119 HOH HOH . C 3 HOH A 120 422 120 HOH HOH . C 3 HOH A 121 423 121 HOH HOH . C 3 HOH A 122 424 122 HOH HOH . C 3 HOH A 123 425 123 HOH HOH . C 3 HOH A 124 426 124 HOH HOH . C 3 HOH A 125 427 125 HOH HOH . C 3 HOH A 126 428 126 HOH HOH . C 3 HOH A 127 429 127 HOH HOH . C 3 HOH A 128 430 128 HOH HOH . C 3 HOH A 129 431 129 HOH HOH . C 3 HOH A 130 432 130 HOH HOH . C 3 HOH A 131 433 131 HOH HOH . C 3 HOH A 132 434 132 HOH HOH . C 3 HOH A 133 435 133 HOH HOH . C 3 HOH A 134 436 134 HOH HOH . C 3 HOH A 135 437 135 HOH HOH . C 3 HOH A 136 438 136 HOH HOH . C 3 HOH A 137 439 137 HOH HOH . C 3 HOH A 138 440 138 HOH HOH . C 3 HOH A 139 441 139 HOH HOH . C 3 HOH A 140 442 140 HOH HOH . C 3 HOH A 141 443 141 HOH HOH . C 3 HOH A 142 444 142 HOH HOH . C 3 HOH A 143 445 143 HOH HOH . C 3 HOH A 144 446 144 HOH HOH . C 3 HOH A 145 447 145 HOH HOH . C 3 HOH A 146 448 146 HOH HOH . C 3 HOH A 147 449 147 HOH HOH . C 3 HOH A 148 450 148 HOH HOH . C 3 HOH A 149 451 149 HOH HOH . C 3 HOH A 150 452 150 HOH HOH . C 3 HOH A 151 453 151 HOH HOH . C 3 HOH A 152 454 152 HOH HOH . C 3 HOH A 153 455 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SAM . . . B 2 24.169 -5.64 12.426 1 31.74 ? N SAM 302 A 1 HETATM 2 C CA SAM . . . B 2 24.026 -7.098 12.242 1 32.62 ? CA SAM 302 A 1 HETATM 3 C C SAM . . . B 2 22.742 -7.657 12.885 1 32.65 ? C SAM 302 A 1 HETATM 4 O O SAM . . . B 2 21.991 -6.913 13.55 1 31.34 ? O SAM 302 A 1 HETATM 5 O OXT SAM . . . B 2 22.47 -8.865 12.711 1 31.32 ? OXT SAM 302 A 1 HETATM 6 C CB SAM . . . B 2 25.271 -7.863 12.704 1 32.44 ? CB SAM 302 A 1 HETATM 7 C CG SAM . . . B 2 25.546 -7.78 14.19 1 35.56 ? CG SAM 302 A 1 HETATM 8 S SD SAM . . . B 2 26.86 -8.961 14.594 1 42.44 ? SD SAM 302 A 1 HETATM 9 C CE SAM . . . B 2 26.575 -9.195 16.378 1 39.43 ? CE SAM 302 A 1 HETATM 10 C C5' SAM . . . B 2 28.419 -7.971 14.485 1 39 ? C5' SAM 302 A 1 HETATM 11 C C4' SAM . . . B 2 28.912 -7.409 13.118 1 38.98 ? C4' SAM 302 A 1 HETATM 12 O O4' SAM . . . B 2 29.891 -6.385 13.322 1 38.35 ? O4' SAM 302 A 1 HETATM 13 C C3' SAM . . . B 2 29.635 -8.399 12.188 1 40.03 ? C3' SAM 302 A 1 HETATM 14 O O3' SAM . . . B 2 29.194 -8.188 10.839 1 34.69 ? O3' SAM 302 A 1 HETATM 15 C C2' SAM . . . B 2 31.137 -8.064 12.364 1 38.82 ? C2' SAM 302 A 1 HETATM 16 O O2' SAM . . . B 2 31.933 -8.441 11.266 1 37.46 ? O2' SAM 302 A 1 HETATM 17 C C1' SAM . . . B 2 31.015 -6.552 12.471 1 36.21 ? C1' SAM 302 A 1 HETATM 18 N N9 SAM . . . B 2 32.204 -5.782 12.941 1 36.04 ? N9 SAM 302 A 1 HETATM 19 C C8 SAM . . . B 2 32.931 -5.942 14.099 1 34.37 ? C8 SAM 302 A 1 HETATM 20 N N7 SAM . . . B 2 33.903 -4.977 14.135 1 36.35 ? N7 SAM 302 A 1 HETATM 21 C C5 SAM . . . B 2 33.783 -4.186 13.017 1 35.43 ? C5 SAM 302 A 1 HETATM 22 C C6 SAM . . . B 2 34.518 -3.086 12.538 1 35.64 ? C6 SAM 302 A 1 HETATM 23 N N6 SAM . . . B 2 35.579 -2.59 13.21 1 31.76 ? N6 SAM 302 A 1 HETATM 24 N N1 SAM . . . B 2 34.122 -2.487 11.352 1 33.43 ? N1 SAM 302 A 1 HETATM 25 C C2 SAM . . . B 2 33.067 -2.998 10.621 1 35.42 ? C2 SAM 302 A 1 HETATM 26 N N3 SAM . . . B 2 32.356 -4.09 11.084 1 35.17 ? N3 SAM 302 A 1 HETATM 27 C C4 SAM . . . B 2 32.712 -4.681 12.269 1 35.51 ? C4 SAM 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #