data_2FON # _model_server_result.job_id BaQmN3cJpNgJFR26ehcxoA _model_server_result.datetime_utc '2024-12-26 16:43:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fon # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":3000}' # _entry.id 2FON # _exptl.entry_id 2FON _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2FON _cell.length_a 120.2 _cell.length_b 240.33 _cell.length_c 89.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FON _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,G,H 1 1 C,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -120.2 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2FON _atom_sites.fract_transf_matrix[1][1] 0.008319 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011198 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FAD A 1 1000 1000 FAD FAD . E 2 FAD B 1 2000 2000 FAD FAD . F 2 FAD C 1 3000 3000 FAD FAD . G 3 HOH A 1 1001 4 HOH HOH . G 3 HOH A 2 1002 10 HOH HOH . G 3 HOH A 3 1003 12 HOH HOH . G 3 HOH A 4 1004 15 HOH HOH . G 3 HOH A 5 1005 20 HOH HOH . G 3 HOH A 6 1006 21 HOH HOH . G 3 HOH A 7 1007 23 HOH HOH . G 3 HOH A 8 1008 25 HOH HOH . G 3 HOH A 9 1009 26 HOH HOH . G 3 HOH A 10 1010 29 HOH HOH . G 3 HOH A 11 1011 32 HOH HOH . G 3 HOH A 12 1012 33 HOH HOH . G 3 HOH A 13 1013 34 HOH HOH . G 3 HOH A 14 1014 35 HOH HOH . H 3 HOH B 1 2001 1 HOH HOH . H 3 HOH B 2 2002 2 HOH HOH . H 3 HOH B 3 2003 3 HOH HOH . H 3 HOH B 4 2004 5 HOH HOH . H 3 HOH B 5 2005 6 HOH HOH . H 3 HOH B 6 2006 7 HOH HOH . H 3 HOH B 7 2007 8 HOH HOH . H 3 HOH B 8 2008 9 HOH HOH . H 3 HOH B 9 2009 11 HOH HOH . H 3 HOH B 10 2010 13 HOH HOH . H 3 HOH B 11 2011 14 HOH HOH . H 3 HOH B 12 2012 16 HOH HOH . H 3 HOH B 13 2013 17 HOH HOH . H 3 HOH B 14 2014 18 HOH HOH . H 3 HOH B 15 2015 19 HOH HOH . H 3 HOH B 16 2016 22 HOH HOH . H 3 HOH B 17 2017 24 HOH HOH . H 3 HOH B 18 2018 27 HOH HOH . H 3 HOH B 19 2019 28 HOH HOH . H 3 HOH B 20 2020 30 HOH HOH . H 3 HOH B 21 2021 31 HOH HOH . H 3 HOH B 22 2022 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . F 2 -45.518 -11.866 -55.027 1 100.51 ? PA FAD 3000 C 1 HETATM 2 O O1A FAD . . . F 2 -44.302 -12.183 -54.186 1 101.2 ? O1A FAD 3000 C 1 HETATM 3 O O2A FAD . . . F 2 -45.845 -12.926 -56.062 1 101.36 ? O2A FAD 3000 C 1 HETATM 4 O O5B FAD . . . F 2 -46.806 -11.627 -54.089 1 97.53 ? O5B FAD 3000 C 1 HETATM 5 C C5B FAD . . . F 2 -47.977 -12.399 -54.212 1 93.7 ? C5B FAD 3000 C 1 HETATM 6 C C4B FAD . . . F 2 -48.548 -12.469 -52.808 1 92.13 ? C4B FAD 3000 C 1 HETATM 7 O O4B FAD . . . F 2 -47.659 -13.207 -51.963 1 91.21 ? O4B FAD 3000 C 1 HETATM 8 C C3B FAD . . . F 2 -48.719 -11.048 -52.237 1 91.01 ? C3B FAD 3000 C 1 HETATM 9 O O3B FAD . . . F 2 -50.066 -10.817 -51.847 1 87.27 ? O3B FAD 3000 C 1 HETATM 10 C C2B FAD . . . F 2 -47.706 -10.972 -51.079 1 91.12 ? C2B FAD 3000 C 1 HETATM 11 O O2B FAD . . . F 2 -48.148 -10.277 -49.913 1 89.25 ? O2B FAD 3000 C 1 HETATM 12 C C1B FAD . . . F 2 -47.336 -12.445 -50.793 1 91.49 ? C1B FAD 3000 C 1 HETATM 13 N N9A FAD . . . F 2 -45.918 -12.61 -50.376 1 91.09 ? N9A FAD 3000 C 1 HETATM 14 C C8A FAD . . . F 2 -44.807 -12.503 -51.18 1 90.77 ? C8A FAD 3000 C 1 HETATM 15 N N7A FAD . . . F 2 -43.705 -12.72 -50.437 1 91.18 ? N7A FAD 3000 C 1 HETATM 16 C C5A FAD . . . F 2 -44.084 -12.962 -49.151 1 92.02 ? C5A FAD 3000 C 1 HETATM 17 C C6A FAD . . . F 2 -43.347 -13.246 -47.976 1 91.32 ? C6A FAD 3000 C 1 HETATM 18 N N6A FAD . . . F 2 -42.009 -13.31 -48.024 1 90.58 ? N6A FAD 3000 C 1 HETATM 19 N N1A FAD . . . F 2 -44.023 -13.454 -46.774 1 90.66 ? N1A FAD 3000 C 1 HETATM 20 C C2A FAD . . . F 2 -45.416 -13.37 -46.743 1 91.78 ? C2A FAD 3000 C 1 HETATM 21 N N3A FAD . . . F 2 -46.149 -13.087 -47.906 1 91.47 ? N3A FAD 3000 C 1 HETATM 22 C C4A FAD . . . F 2 -45.487 -12.89 -49.096 1 91.72 ? C4A FAD 3000 C 1 HETATM 23 N N1 FAD . . . F 2 -40.359 -5.307 -62.752 1 107.15 ? N1 FAD 3000 C 1 HETATM 24 C C2 FAD . . . F 2 -39.165 -4.914 -63.325 1 107.48 ? C2 FAD 3000 C 1 HETATM 25 O O2 FAD . . . F 2 -38.137 -5.553 -63.076 1 107.58 ? O2 FAD 3000 C 1 HETATM 26 N N3 FAD . . . F 2 -39.13 -3.812 -64.175 1 107.37 ? N3 FAD 3000 C 1 HETATM 27 C C4 FAD . . . F 2 -40.297 -3.109 -64.454 1 107.33 ? C4 FAD 3000 C 1 HETATM 28 O O4 FAD . . . F 2 -40.287 -2.14 -65.208 1 107.2 ? O4 FAD 3000 C 1 HETATM 29 C C4X FAD . . . F 2 -41.5 -3.5 -63.876 1 107.55 ? C4X FAD 3000 C 1 HETATM 30 N N5 FAD . . . F 2 -42.668 -2.8 -64.154 1 107.28 ? N5 FAD 3000 C 1 HETATM 31 C C5X FAD . . . F 2 -43.858 -3.207 -63.581 1 107.34 ? C5X FAD 3000 C 1 HETATM 32 C C6 FAD . . . F 2 -45.03 -2.505 -63.863 1 107.33 ? C6 FAD 3000 C 1 HETATM 33 C C7 FAD . . . F 2 -46.24 -2.91 -63.289 1 107.26 ? C7 FAD 3000 C 1 HETATM 34 C C7M FAD . . . F 2 -47.481 -2.127 -63.621 1 107.11 ? C7M FAD 3000 C 1 HETATM 35 C C8 FAD . . . F 2 -46.268 -4.026 -62.427 1 107.25 ? C8 FAD 3000 C 1 HETATM 36 C C8M FAD . . . F 2 -47.534 -4.505 -61.774 1 107.38 ? C8M FAD 3000 C 1 HETATM 37 C C9 FAD . . . F 2 -45.096 -4.725 -62.148 1 107.35 ? C9 FAD 3000 C 1 HETATM 38 C C9A FAD . . . F 2 -43.883 -4.322 -62.72 1 107.55 ? C9A FAD 3000 C 1 HETATM 39 N N10 FAD . . . F 2 -42.707 -5.023 -62.455 1 107.27 ? N10 FAD 3000 C 1 HETATM 40 C C10 FAD . . . F 2 -41.518 -4.609 -63.022 1 107.26 ? C10 FAD 3000 C 1 HETATM 41 C C1' FAD . . . F 2 -42.685 -6.187 -61.514 1 106.75 ? C1' FAD 3000 C 1 HETATM 42 C C2' FAD . . . F 2 -42.433 -5.487 -60.164 1 104.09 ? C2' FAD 3000 C 1 HETATM 43 O O2' FAD . . . F 2 -41.249 -4.717 -60.221 1 103.27 ? O2' FAD 3000 C 1 HETATM 44 C C3' FAD . . . F 2 -42.33 -6.434 -58.971 1 103.04 ? C3' FAD 3000 C 1 HETATM 45 O O3' FAD . . . F 2 -41.011 -6.947 -58.928 1 105.05 ? O3' FAD 3000 C 1 HETATM 46 C C4' FAD . . . F 2 -43.372 -7.548 -59.014 1 101.03 ? C4' FAD 3000 C 1 HETATM 47 O O4' FAD . . . F 2 -44.681 -7.014 -59.102 1 99.65 ? O4' FAD 3000 C 1 HETATM 48 C C5' FAD . . . F 2 -43.281 -8.439 -57.792 1 99.25 ? C5' FAD 3000 C 1 HETATM 49 O O5' FAD . . . F 2 -44.6 -8.873 -57.567 1 99.7 ? O5' FAD 3000 C 1 HETATM 50 P P FAD . . . F 2 -44.945 -10.407 -57.291 1 98.26 ? P FAD 3000 C 1 HETATM 51 O O1P FAD . . . F 2 -46.175 -10.917 -58.028 1 97.21 ? O1P FAD 3000 C 1 HETATM 52 O O2P FAD . . . F 2 -43.684 -11.204 -57.534 1 99.46 ? O2P FAD 3000 C 1 HETATM 53 O O3P FAD . . . F 2 -45.248 -10.436 -55.726 1 99.84 ? O3P FAD 3000 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 53 #