data_2FQY # _model_server_result.job_id 0fnlHnQONB-169X8f6a-Pw _model_server_result.datetime_utc '2024-11-05 06:43:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fqy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 2FQY # _exptl.entry_id 2FQY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 267.241 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ADENOSINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2FQY _cell.length_a 55.62 _cell.length_b 69.097 _cell.length_c 69.656 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FQY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H13 N5 O4' _chem_comp.formula_weight 267.241 _chem_comp.id ADN _chem_comp.mon_nstd_flag . _chem_comp.name ADENOSINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5' C5' ADN sing 1 n n O5' HO5' ADN sing 2 n n C5' C4' ADN sing 3 n n C5' "H5'1" ADN sing 4 n n C5' "H5'2" ADN sing 5 n n C4' O4' ADN sing 6 n n C4' C3' ADN sing 7 n n C4' H4' ADN sing 8 n n O4' C1' ADN sing 9 n n C3' O3' ADN sing 10 n n C3' C2' ADN sing 11 n n C3' H3' ADN sing 12 n n O3' HO3' ADN sing 13 n n C2' O2' ADN sing 14 n n C2' C1' ADN sing 15 n n C2' H2' ADN sing 16 n n O2' HO2' ADN sing 17 n n C1' N9 ADN sing 18 n n C1' H1' ADN sing 19 n n N9 C8 ADN sing 20 n y N9 C4 ADN sing 21 n y C8 N7 ADN doub 22 n y C8 H8 ADN sing 23 n n N7 C5 ADN sing 24 n y C5 C6 ADN sing 25 n y C5 C4 ADN doub 26 n y C6 N6 ADN sing 27 n n C6 N1 ADN doub 28 n y N6 HN61 ADN sing 29 n n N6 HN62 ADN sing 30 n n N1 C2 ADN sing 31 n y C2 N3 ADN doub 32 n y C2 H2 ADN sing 33 n n N3 C4 ADN sing 34 n y # _atom_sites.entry_id 2FQY _atom_sites.fract_transf_matrix[1][1] 0.017979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADN A 1 400 400 ADN ADN . C 3 HOH A 1 401 1 HOH HOH . C 3 HOH A 2 402 2 HOH HOH . C 3 HOH A 3 403 3 HOH HOH . C 3 HOH A 4 404 4 HOH HOH . C 3 HOH A 5 405 5 HOH HOH . C 3 HOH A 6 406 6 HOH HOH . C 3 HOH A 7 407 7 HOH HOH . C 3 HOH A 8 408 8 HOH HOH . C 3 HOH A 9 409 9 HOH HOH . C 3 HOH A 10 410 10 HOH HOH . C 3 HOH A 11 411 11 HOH HOH . C 3 HOH A 12 412 12 HOH HOH . C 3 HOH A 13 413 13 HOH HOH . C 3 HOH A 14 414 14 HOH HOH . C 3 HOH A 15 415 15 HOH HOH . C 3 HOH A 16 416 16 HOH HOH . C 3 HOH A 17 417 17 HOH HOH . C 3 HOH A 18 418 18 HOH HOH . C 3 HOH A 19 419 19 HOH HOH . C 3 HOH A 20 420 20 HOH HOH . C 3 HOH A 21 421 21 HOH HOH . C 3 HOH A 22 422 22 HOH HOH . C 3 HOH A 23 423 23 HOH HOH . C 3 HOH A 24 424 24 HOH HOH . C 3 HOH A 25 425 25 HOH HOH . C 3 HOH A 26 426 26 HOH HOH . C 3 HOH A 27 427 27 HOH HOH . C 3 HOH A 28 428 28 HOH HOH . C 3 HOH A 29 429 29 HOH HOH . C 3 HOH A 30 430 30 HOH HOH . C 3 HOH A 31 431 31 HOH HOH . C 3 HOH A 32 432 32 HOH HOH . C 3 HOH A 33 433 33 HOH HOH . C 3 HOH A 34 434 34 HOH HOH . C 3 HOH A 35 435 35 HOH HOH . C 3 HOH A 36 436 36 HOH HOH . C 3 HOH A 37 437 37 HOH HOH . C 3 HOH A 38 438 38 HOH HOH . C 3 HOH A 39 439 39 HOH HOH . C 3 HOH A 40 440 40 HOH HOH . C 3 HOH A 41 441 41 HOH HOH . C 3 HOH A 42 442 42 HOH HOH . C 3 HOH A 43 443 43 HOH HOH . C 3 HOH A 44 444 44 HOH HOH . C 3 HOH A 45 445 45 HOH HOH . C 3 HOH A 46 446 46 HOH HOH . C 3 HOH A 47 447 47 HOH HOH . C 3 HOH A 48 448 48 HOH HOH . C 3 HOH A 49 449 49 HOH HOH . C 3 HOH A 50 450 50 HOH HOH . C 3 HOH A 51 451 51 HOH HOH . C 3 HOH A 52 452 52 HOH HOH . C 3 HOH A 53 453 53 HOH HOH . C 3 HOH A 54 454 54 HOH HOH . C 3 HOH A 55 455 55 HOH HOH . C 3 HOH A 56 456 56 HOH HOH . C 3 HOH A 57 457 57 HOH HOH . C 3 HOH A 58 458 58 HOH HOH . C 3 HOH A 59 459 59 HOH HOH . C 3 HOH A 60 460 60 HOH HOH . C 3 HOH A 61 461 61 HOH HOH . C 3 HOH A 62 462 62 HOH HOH . C 3 HOH A 63 463 63 HOH HOH . C 3 HOH A 64 464 64 HOH HOH . C 3 HOH A 65 465 65 HOH HOH . C 3 HOH A 66 466 66 HOH HOH . C 3 HOH A 67 467 67 HOH HOH . C 3 HOH A 68 468 68 HOH HOH . C 3 HOH A 69 469 69 HOH HOH . C 3 HOH A 70 470 70 HOH HOH . C 3 HOH A 71 471 71 HOH HOH . C 3 HOH A 72 472 72 HOH HOH . C 3 HOH A 73 473 73 HOH HOH . C 3 HOH A 74 474 74 HOH HOH . C 3 HOH A 75 475 75 HOH HOH . C 3 HOH A 76 476 76 HOH HOH . C 3 HOH A 77 477 77 HOH HOH . C 3 HOH A 78 478 78 HOH HOH . C 3 HOH A 79 479 79 HOH HOH . C 3 HOH A 80 480 80 HOH HOH . C 3 HOH A 81 481 81 HOH HOH . C 3 HOH A 82 482 82 HOH HOH . C 3 HOH A 83 483 83 HOH HOH . C 3 HOH A 84 484 84 HOH HOH . C 3 HOH A 85 485 85 HOH HOH . C 3 HOH A 86 486 86 HOH HOH . C 3 HOH A 87 487 87 HOH HOH . C 3 HOH A 88 488 88 HOH HOH . C 3 HOH A 89 489 89 HOH HOH . C 3 HOH A 90 490 90 HOH HOH . C 3 HOH A 91 491 91 HOH HOH . C 3 HOH A 92 492 92 HOH HOH . C 3 HOH A 93 493 93 HOH HOH . C 3 HOH A 94 494 94 HOH HOH . C 3 HOH A 95 495 95 HOH HOH . C 3 HOH A 96 496 96 HOH HOH . C 3 HOH A 97 497 97 HOH HOH . C 3 HOH A 98 498 98 HOH HOH . C 3 HOH A 99 499 99 HOH HOH . C 3 HOH A 100 500 100 HOH HOH . C 3 HOH A 101 501 101 HOH HOH . C 3 HOH A 102 502 102 HOH HOH . C 3 HOH A 103 503 103 HOH HOH . C 3 HOH A 104 504 104 HOH HOH . C 3 HOH A 105 505 105 HOH HOH . C 3 HOH A 106 506 106 HOH HOH . C 3 HOH A 107 507 107 HOH HOH . C 3 HOH A 108 508 108 HOH HOH . C 3 HOH A 109 509 109 HOH HOH . C 3 HOH A 110 510 110 HOH HOH . C 3 HOH A 111 511 111 HOH HOH . C 3 HOH A 112 512 112 HOH HOH . C 3 HOH A 113 513 113 HOH HOH . C 3 HOH A 114 514 114 HOH HOH . C 3 HOH A 115 515 115 HOH HOH . C 3 HOH A 116 516 116 HOH HOH . C 3 HOH A 117 517 117 HOH HOH . C 3 HOH A 118 518 118 HOH HOH . C 3 HOH A 119 519 119 HOH HOH . C 3 HOH A 120 520 120 HOH HOH . C 3 HOH A 121 521 121 HOH HOH . C 3 HOH A 122 522 122 HOH HOH . C 3 HOH A 123 523 123 HOH HOH . C 3 HOH A 124 524 124 HOH HOH . C 3 HOH A 125 525 125 HOH HOH . C 3 HOH A 126 526 126 HOH HOH . C 3 HOH A 127 527 127 HOH HOH . C 3 HOH A 128 528 128 HOH HOH . C 3 HOH A 129 529 129 HOH HOH . C 3 HOH A 130 530 130 HOH HOH . C 3 HOH A 131 531 131 HOH HOH . C 3 HOH A 132 532 132 HOH HOH . C 3 HOH A 133 533 133 HOH HOH . C 3 HOH A 134 534 134 HOH HOH . C 3 HOH A 135 535 135 HOH HOH . C 3 HOH A 136 536 136 HOH HOH . C 3 HOH A 137 537 137 HOH HOH . C 3 HOH A 138 538 138 HOH HOH . C 3 HOH A 139 539 139 HOH HOH . C 3 HOH A 140 540 140 HOH HOH . C 3 HOH A 141 541 141 HOH HOH . C 3 HOH A 142 542 142 HOH HOH . C 3 HOH A 143 543 143 HOH HOH . C 3 HOH A 144 544 144 HOH HOH . C 3 HOH A 145 545 145 HOH HOH . C 3 HOH A 146 546 146 HOH HOH . C 3 HOH A 147 547 147 HOH HOH . C 3 HOH A 148 548 148 HOH HOH . C 3 HOH A 149 549 149 HOH HOH . C 3 HOH A 150 550 150 HOH HOH . C 3 HOH A 151 551 151 HOH HOH . C 3 HOH A 152 552 152 HOH HOH . C 3 HOH A 153 553 153 HOH HOH . C 3 HOH A 154 554 154 HOH HOH . C 3 HOH A 155 555 155 HOH HOH . C 3 HOH A 156 556 156 HOH HOH . C 3 HOH A 157 557 157 HOH HOH . C 3 HOH A 158 558 158 HOH HOH . C 3 HOH A 159 559 159 HOH HOH . C 3 HOH A 160 560 160 HOH HOH . C 3 HOH A 161 561 161 HOH HOH . C 3 HOH A 162 562 162 HOH HOH . C 3 HOH A 163 563 163 HOH HOH . C 3 HOH A 164 564 164 HOH HOH . C 3 HOH A 165 565 165 HOH HOH . C 3 HOH A 166 566 166 HOH HOH . C 3 HOH A 167 567 167 HOH HOH . C 3 HOH A 168 568 168 HOH HOH . C 3 HOH A 169 569 169 HOH HOH . C 3 HOH A 170 570 170 HOH HOH . C 3 HOH A 171 571 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O5' ADN . . . B 2 31.363 62.367 13.194 1 13.32 ? O5' ADN 400 A 1 HETATM 2 C C5' ADN . . . B 2 31.052 61.097 13.743 1 10 ? C5' ADN 400 A 1 HETATM 3 C C4' ADN . . . B 2 31.913 60.025 13.066 1 9.24 ? C4' ADN 400 A 1 HETATM 4 O O4' ADN . . . B 2 31.739 60.032 11.608 1 10.97 ? O4' ADN 400 A 1 HETATM 5 C C3' ADN . . . B 2 33.442 60.237 13.324 1 10.07 ? C3' ADN 400 A 1 HETATM 6 O O3' ADN . . . B 2 33.865 59.729 14.61 1 9.82 ? O3' ADN 400 A 1 HETATM 7 C C2' ADN . . . B 2 34.028 59.472 12.115 1 12.16 ? C2' ADN 400 A 1 HETATM 8 O O2' ADN . . . B 2 34.009 58.048 12.361 1 12.03 ? O2' ADN 400 A 1 HETATM 9 C C1' ADN . . . B 2 33.053 59.838 10.988 1 10.79 ? C1' ADN 400 A 1 HETATM 10 N N9 ADN . . . B 2 33.493 61.072 10.289 1 14.47 ? N9 ADN 400 A 1 HETATM 11 C C8 ADN . . . B 2 33.109 62.377 10.552 1 13.61 ? C8 ADN 400 A 1 HETATM 12 N N7 ADN . . . B 2 33.656 63.201 9.701 1 12.1 ? N7 ADN 400 A 1 HETATM 13 C C5 ADN . . . B 2 34.405 62.49 8.831 1 14.47 ? C5 ADN 400 A 1 HETATM 14 C C6 ADN . . . B 2 35.195 62.823 7.719 1 12.61 ? C6 ADN 400 A 1 HETATM 15 N N6 ADN . . . B 2 35.394 64.154 7.388 1 13 ? N6 ADN 400 A 1 HETATM 16 N N1 ADN . . . B 2 35.757 61.826 7.011 1 14.92 ? N1 ADN 400 A 1 HETATM 17 C C2 ADN . . . B 2 35.669 60.528 7.4 1 15.65 ? C2 ADN 400 A 1 HETATM 18 N N3 ADN . . . B 2 34.981 60.174 8.466 1 13.16 ? N3 ADN 400 A 1 HETATM 19 C C4 ADN . . . B 2 34.32 61.113 9.193 1 13.59 ? C4 ADN 400 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 19 #