data_2FT3
#
_model_server_result.job_id            54dfj9k6BJ7Q8ARaA5Q15A 
_model_server_result.datetime_utc      '2024-11-05 00:25:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ft3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":811}' 
#
_entry.id    2FT3 
#
_exptl.entry_id    2FT3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          116.61 
_cell.angle_gamma         90 
_cell.entry_id            2FT3 
_cell.length_a            206.511 
_cell.length_b            119.222 
_cell.length_c            140.625 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2FT3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,G,H,I,J 1 1 
C,D,K,L,M,N 2 1 
E,F,O,P,Q,R 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 27 A CYS 27 1_555 A SG CYS 33 A CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 A SG CYS 31 A CYS 31 1_555 A SG CYS 40 A CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
disulf ? disulf3 A SG CYS 285 A CYS 285 1_555 A SG CYS 318 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf4 B SG CYS 27 B CYS 27 1_555 B SG CYS 33 B CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf5 B SG CYS 31 B CYS 31 1_555 B SG CYS 40 B CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf6 B SG CYS 285 B CYS 285 1_555 B SG CYS 318 B CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf7 C SG CYS 27 C CYS 27 1_555 C SG CYS 33 C CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
disulf ? disulf8 C SG CYS 31 C CYS 31 1_555 C SG CYS 40 C CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
disulf ? disulf9 C SG CYS 285 C CYS 285 1_555 C SG CYS 318 C CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf10 D SG CYS 27 D CYS 27 1_555 D SG CYS 33 D CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf11 D SG CYS 31 D CYS 31 1_555 D SG CYS 40 D CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf12 D SG CYS 285 D CYS 285 1_555 D SG CYS 318 D CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf13 E SG CYS 27 E CYS 27 1_555 E SG CYS 33 E CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf14 E SG CYS 31 E CYS 31 1_555 E SG CYS 40 E CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
disulf ? disulf15 E SG CYS 285 E CYS 285 1_555 E SG CYS 318 E CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf16 F SG CYS 27 F CYS 27 1_555 F SG CYS 33 F CYS 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf17 F SG CYS 31 F CYS 31 1_555 F SG CYS 40 F CYS 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf18 F SG CYS 285 F CYS 285 1_555 F SG CYS 318 F CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
covale ? covale1 A ND2 ASN 275 A ASN 275 1_555 G C1 NAG . A NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.475 ? 
covale ? covale2 B ND2 ASN 275 B ASN 275 1_555 I C1 NAG . B NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.476 ? 
covale ? covale3 C ND2 ASN 275 C ASN 275 1_555 K C1 NAG . C NAG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 ? 
covale ? covale4 D CA GLY 225 D GLY 225 1_555 N OB2 FLC . D FLC 2193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? 
covale ? covale5 D ND2 ASN 275 D ASN 275 1_555 M C1 NAG . D NAG 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
covale ? covale6 E ND2 ASN 275 E ASN 275 1_555 O C1 NAG . E NAG 809 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? 
covale ? covale7 F ND2 ASN 275 F ASN 275 1_555 Q C1 NAG . F NAG 811 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 252 n n 
C1 O1 NAG sing 253 n n 
C1 O5 NAG sing 254 n n 
C1 H1 NAG sing 255 n n 
C2 C3 NAG sing 256 n n 
C2 N2 NAG sing 257 n n 
C2 H2 NAG sing 258 n n 
C3 C4 NAG sing 259 n n 
C3 O3 NAG sing 260 n n 
C3 H3 NAG sing 261 n n 
C4 C5 NAG sing 262 n n 
C4 O4 NAG sing 263 n n 
C4 H4 NAG sing 264 n n 
C5 C6 NAG sing 265 n n 
C5 O5 NAG sing 266 n n 
C5 H5 NAG sing 267 n n 
C6 O6 NAG sing 268 n n 
C6 H61 NAG sing 269 n n 
C6 H62 NAG sing 270 n n 
C7 C8 NAG sing 271 n n 
C7 N2 NAG sing 272 n n 
C7 O7 NAG doub 273 n n 
C8 H81 NAG sing 274 n n 
C8 H82 NAG sing 275 n n 
C8 H83 NAG sing 276 n n 
N2 HN2 NAG sing 277 n n 
O1 HO1 NAG sing 278 n n 
O3 HO3 NAG sing 279 n n 
O4 HO4 NAG sing 280 n n 
O6 HO6 NAG sing 281 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     2FT3 
_atom_sites.fract_transf_matrix[1][1]    0.00484 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00243 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00839 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00795 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 NAG A 1 801 801 NAG NAG . 
H 3 FLC A 1 2190 2190 FLC FLC . 
I 2 NAG B 1 803 803 NAG NAG . 
J 3 FLC B 1 2191 2191 FLC FLC . 
K 2 NAG C 1 805 805 NAG NAG . 
L 3 FLC C 1 2192 2192 FLC FLC . 
M 2 NAG D 1 807 807 NAG NAG . 
N 3 FLC D 1 2193 2193 FLC FLC . 
O 2 NAG E 1 809 809 NAG NAG . 
P 3 FLC E 1 2194 2194 FLC FLC . 
Q 2 NAG F 1 811 811 NAG NAG . 
R 3 FLC F 1 2195 2195 FLC FLC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . Q 2 16.213 15.541 81.011 1 50.57 ? C1 NAG 811 F 1 
HETATM 2 C C2 NAG . . . Q 2 16.733 16.857 80.364 1 50.4 ? C2 NAG 811 F 1 
HETATM 3 C C3 NAG . . . Q 2 15.783 17.536 79.327 1 50.73 ? C3 NAG 811 F 1 
HETATM 4 C C4 NAG . . . Q 2 14.286 17.164 79.364 1 51.14 ? C4 NAG 811 F 1 
HETATM 5 C C5 NAG . . . Q 2 13.986 16.224 80.542 1 51.5 ? C5 NAG 811 F 1 
HETATM 6 C C6 NAG . . . Q 2 12.515 15.76 80.623 1 51.41 ? C6 NAG 811 F 1 
HETATM 7 C C7 NAG . . . Q 2 16.74 18.097 82.577 1 50.63 ? C7 NAG 811 F 1 
HETATM 8 C C8 NAG . . . Q 2 17.628 18.432 83.774 1 50.69 ? C8 NAG 811 F 1 
HETATM 9 N N2 NAG . . . Q 2 17.287 17.795 81.366 1 50.37 ? N2 NAG 811 F 1 
HETATM 10 O O3 NAG . . . Q 2 16.214 17.236 78 1 50.46 ? O3 NAG 811 F 1 
HETATM 11 O O4 NAG . . . Q 2 13.442 18.313 79.337 1 49.79 ? O4 NAG 811 F 1 
HETATM 12 O O5 NAG . . . Q 2 14.923 15.145 80.526 1 51.33 ? O5 NAG 811 F 1 
HETATM 13 O O6 NAG . . . Q 2 12.041 15.153 79.439 1 51.26 ? O6 NAG 811 F 1 
HETATM 14 O O7 NAG . . . Q 2 15.516 18.103 82.74 1 50.61 ? O7 NAG 811 F 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#