data_2FTO # _model_server_result.job_id 4Ivmscqcc_QCzkpncn9y9w _model_server_result.datetime_utc '2024-11-27 03:17:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fto # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":266}' # _entry.id 2FTO # _exptl.entry_id 2FTO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.469 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2FTO _cell.length_a 72.08 _cell.length_b 72.08 _cell.length_c 115.21 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FTO _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 76.806667 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id C _struct_conn.ptnr1_label_comp_id CXM _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_auth_asym_id X _struct_conn.ptnr1_auth_comp_id CXM _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id LYS _struct_conn.ptnr2_label_seq_id 2 _struct_conn.ptnr2_auth_asym_id X _struct_conn.ptnr2_auth_comp_id LYS _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.321 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H23 N5 O6' _chem_comp.formula_weight 477.469 _chem_comp.id CB3 _chem_comp.mon_nstd_flag . _chem_comp.name '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 CB3 sing 70 n y N1 C8A CB3 sing 71 n y N1 HN1 CB3 sing 72 n n C2 NA2 CB3 sing 73 n n C2 N3 CB3 doub 74 n y NA2 HN21 CB3 sing 75 n n NA2 HN22 CB3 sing 76 n n N3 C4 CB3 sing 77 n y C4 O4 CB3 doub 78 n n C4 C4A CB3 sing 79 n y C4A C5 CB3 doub 80 n y C4A C8A CB3 sing 81 n y C5 C6 CB3 sing 82 n y C5 H5 CB3 sing 83 n n C6 C7 CB3 doub 84 n y C6 C9 CB3 sing 85 n n C7 C8 CB3 sing 86 n y C7 H7 CB3 sing 87 n n C8 C8A CB3 doub 88 n y C8 H8 CB3 sing 89 n n C9 N10 CB3 sing 90 n n C9 H91 CB3 sing 91 n n C9 H92 CB3 sing 92 n n N10 C14 CB3 sing 93 n n N10 CP1 CB3 sing 94 n n C11 C12 CB3 doub 95 n y C11 C16 CB3 sing 96 n y C11 C CB3 sing 97 n n C12 C13 CB3 sing 98 n y C12 H12 CB3 sing 99 n n C13 C14 CB3 doub 100 n y C13 H13 CB3 sing 101 n n C14 C15 CB3 sing 102 n y C15 C16 CB3 doub 103 n y C15 H15 CB3 sing 104 n n C16 H16 CB3 sing 105 n n C O CB3 doub 106 n n C N CB3 sing 107 n n N CA CB3 sing 108 n n N HN CB3 sing 109 n n CA CB CB3 sing 110 n n CA CT CB3 sing 111 n n CA HA CB3 sing 112 n n CB CG CB3 sing 113 n n CB HB1 CB3 sing 114 n n CB HB2 CB3 sing 115 n n CG CD CB3 sing 116 n n CG HG1 CB3 sing 117 n n CG HG2 CB3 sing 118 n n CD OE1 CB3 doub 119 n n CD OE2 CB3 sing 120 n n OE2 HOE2 CB3 sing 121 n n CT O1 CB3 doub 122 n n CT O2 CB3 sing 123 n n O2 HO2 CB3 sing 124 n n CP1 CP2 CB3 sing 125 n n CP1 HP11 CB3 sing 126 n n CP1 HP12 CB3 sing 127 n n CP2 CP3 CB3 trip 128 n n CP3 HP3 CB3 sing 129 n n # _atom_sites.entry_id 2FTO _atom_sites.fract_transf_matrix[1][1] 0.013873 _atom_sites.fract_transf_matrix[1][2] 0.00801 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 X 1 267 267 PO4 PO4 . C 2 PO4 X 1 268 268 PO4 PO4 . D 3 TMP X 1 265 265 TMP TMP . E 4 CB3 X 1 266 266 CB3 CB3 . F 5 HOH X 1 270 270 HOH HOH . F 5 HOH X 2 271 271 HOH HOH . F 5 HOH X 3 272 272 HOH HOH . F 5 HOH X 4 273 273 HOH HOH . F 5 HOH X 5 274 274 HOH HOH . F 5 HOH X 6 275 275 HOH HOH . F 5 HOH X 7 276 276 HOH HOH . F 5 HOH X 8 277 277 HOH HOH . F 5 HOH X 9 278 278 HOH HOH . F 5 HOH X 10 279 279 HOH HOH . F 5 HOH X 11 280 280 HOH HOH . F 5 HOH X 12 281 281 HOH HOH . F 5 HOH X 13 282 282 HOH HOH . F 5 HOH X 14 283 283 HOH HOH . F 5 HOH X 15 284 284 HOH HOH . F 5 HOH X 16 285 285 HOH HOH . F 5 HOH X 17 286 286 HOH HOH . F 5 HOH X 18 287 287 HOH HOH . F 5 HOH X 19 288 288 HOH HOH . F 5 HOH X 20 289 289 HOH HOH . F 5 HOH X 21 290 290 HOH HOH . F 5 HOH X 22 291 291 HOH HOH . F 5 HOH X 23 292 292 HOH HOH . F 5 HOH X 24 293 293 HOH HOH . F 5 HOH X 25 294 294 HOH HOH . F 5 HOH X 26 295 295 HOH HOH . F 5 HOH X 27 296 296 HOH HOH . F 5 HOH X 28 297 297 HOH HOH . F 5 HOH X 29 298 298 HOH HOH . F 5 HOH X 30 299 299 HOH HOH . F 5 HOH X 31 300 300 HOH HOH . F 5 HOH X 32 301 301 HOH HOH . F 5 HOH X 33 302 302 HOH HOH . F 5 HOH X 34 303 303 HOH HOH . F 5 HOH X 35 304 304 HOH HOH . F 5 HOH X 36 305 305 HOH HOH . F 5 HOH X 37 306 306 HOH HOH . F 5 HOH X 38 307 307 HOH HOH . F 5 HOH X 39 308 308 HOH HOH . F 5 HOH X 40 309 309 HOH HOH . F 5 HOH X 41 310 310 HOH HOH . F 5 HOH X 42 311 311 HOH HOH . F 5 HOH X 43 312 312 HOH HOH . F 5 HOH X 44 313 313 HOH HOH . F 5 HOH X 45 314 314 HOH HOH . F 5 HOH X 46 315 315 HOH HOH . F 5 HOH X 47 316 316 HOH HOH . F 5 HOH X 48 317 317 HOH HOH . F 5 HOH X 49 318 318 HOH HOH . F 5 HOH X 50 319 319 HOH HOH . F 5 HOH X 51 320 320 HOH HOH . F 5 HOH X 52 321 321 HOH HOH . F 5 HOH X 53 322 322 HOH HOH . F 5 HOH X 54 323 323 HOH HOH . F 5 HOH X 55 324 324 HOH HOH . F 5 HOH X 56 325 325 HOH HOH . F 5 HOH X 57 326 326 HOH HOH . F 5 HOH X 58 327 327 HOH HOH . F 5 HOH X 59 328 328 HOH HOH . F 5 HOH X 60 329 329 HOH HOH . F 5 HOH X 61 330 330 HOH HOH . F 5 HOH X 62 331 331 HOH HOH . F 5 HOH X 63 332 332 HOH HOH . F 5 HOH X 64 333 333 HOH HOH . F 5 HOH X 65 334 334 HOH HOH . F 5 HOH X 66 335 335 HOH HOH . F 5 HOH X 67 336 336 HOH HOH . F 5 HOH X 68 337 337 HOH HOH . F 5 HOH X 69 338 338 HOH HOH . F 5 HOH X 70 339 339 HOH HOH . F 5 HOH X 71 340 340 HOH HOH . F 5 HOH X 72 341 341 HOH HOH . F 5 HOH X 73 342 342 HOH HOH . F 5 HOH X 74 343 343 HOH HOH . F 5 HOH X 75 344 344 HOH HOH . F 5 HOH X 76 345 345 HOH HOH . F 5 HOH X 77 346 346 HOH HOH . F 5 HOH X 78 347 347 HOH HOH . F 5 HOH X 79 348 348 HOH HOH . F 5 HOH X 80 349 349 HOH HOH . F 5 HOH X 81 350 350 HOH HOH . F 5 HOH X 82 351 351 HOH HOH . F 5 HOH X 83 352 352 HOH HOH . F 5 HOH X 84 353 353 HOH HOH . F 5 HOH X 85 354 354 HOH HOH . F 5 HOH X 86 355 355 HOH HOH . F 5 HOH X 87 356 356 HOH HOH . F 5 HOH X 88 357 357 HOH HOH . F 5 HOH X 89 358 358 HOH HOH . F 5 HOH X 90 359 359 HOH HOH . F 5 HOH X 91 360 360 HOH HOH . F 5 HOH X 92 361 361 HOH HOH . F 5 HOH X 93 362 362 HOH HOH . F 5 HOH X 94 363 363 HOH HOH . F 5 HOH X 95 364 364 HOH HOH . F 5 HOH X 96 365 365 HOH HOH . F 5 HOH X 97 366 366 HOH HOH . F 5 HOH X 98 367 367 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CB3 . . . E 4 42.252 -19.529 41.606 1 21.96 ? N1 CB3 266 X 1 HETATM 2 C C2 CB3 . . . E 4 43.57 -19.498 41.984 1 22.58 ? C2 CB3 266 X 1 HETATM 3 N NA2 CB3 . . . E 4 43.864 -19.678 43.262 1 22.66 ? NA2 CB3 266 X 1 HETATM 4 N N3 CB3 . . . E 4 44.571 -19.259 41.045 1 22.16 ? N3 CB3 266 X 1 HETATM 5 C C4 CB3 . . . E 4 44.234 -19.083 39.707 1 23.51 ? C4 CB3 266 X 1 HETATM 6 O O4 CB3 . . . E 4 45.082 -18.596 38.951 1 23.24 ? O4 CB3 266 X 1 HETATM 7 C C4A CB3 . . . E 4 42.876 -19.147 39.31 1 21.87 ? C4A CB3 266 X 1 HETATM 8 C C5 CB3 . . . E 4 42.468 -19.002 37.987 1 22.17 ? C5 CB3 266 X 1 HETATM 9 C C6 CB3 . . . E 4 41.097 -19.072 37.595 1 23.52 ? C6 CB3 266 X 1 HETATM 10 C C7 CB3 . . . E 4 40.139 -19.285 38.59 1 22.75 ? C7 CB3 266 X 1 HETATM 11 C C8 CB3 . . . E 4 40.54 -19.43 39.912 1 22.64 ? C8 CB3 266 X 1 HETATM 12 C C8A CB3 . . . E 4 41.892 -19.373 40.283 1 23.68 ? C8A CB3 266 X 1 HETATM 13 C C9 CB3 . . . E 4 40.651 -18.961 36.127 1 24.34 ? C9 CB3 266 X 1 HETATM 14 N N10 CB3 . . . E 4 41.77 -19.262 35.21 1 26.04 ? N10 CB3 266 X 1 HETATM 15 C C11 CB3 . . . E 4 44.085 -22.838 35.476 1 26.94 ? C11 CB3 266 X 1 HETATM 16 C C12 CB3 . . . E 4 43.013 -22.639 36.338 1 26.88 ? C12 CB3 266 X 1 HETATM 17 C C13 CB3 . . . E 4 42.262 -21.465 36.238 1 28.01 ? C13 CB3 266 X 1 HETATM 18 C C14 CB3 . . . E 4 42.56 -20.465 35.302 1 25.72 ? C14 CB3 266 X 1 HETATM 19 C C15 CB3 . . . E 4 43.634 -20.67 34.45 1 26.77 ? C15 CB3 266 X 1 HETATM 20 C C16 CB3 . . . E 4 44.396 -21.848 34.542 1 27.03 ? C16 CB3 266 X 1 HETATM 21 C C CB3 . . . E 4 44.905 -24.102 35.558 1 26.67 ? C CB3 266 X 1 HETATM 22 O O CB3 . . . E 4 44.651 -24.977 36.515 1 27.75 ? O CB3 266 X 1 HETATM 23 N N CB3 . . . E 4 45.86 -24.287 34.654 1 28.48 ? N CB3 266 X 1 HETATM 24 C CA CB3 . . . E 4 46.734 -25.444 34.644 1 30.33 ? CA CB3 266 X 1 HETATM 25 C CB CB3 . . . E 4 46.203 -26.612 33.796 1 31 ? CB CB3 266 X 1 HETATM 26 C CG CB3 . . . E 4 45.672 -26.178 32.44 1 34.42 ? CG CB3 266 X 1 HETATM 27 C CD CB3 . . . E 4 45.001 -27.336 31.726 1 42.22 ? CD CB3 266 X 1 HETATM 28 O OE1 CB3 . . . E 4 45.722 -28.184 31.135 1 45.9 ? OE1 CB3 266 X 1 HETATM 29 O OE2 CB3 . . . E 4 43.742 -27.452 31.688 1 44.19 ? OE2 CB3 266 X 1 HETATM 30 C CT CB3 . . . E 4 48.104 -25.012 34.171 1 30.83 ? CT CB3 266 X 1 HETATM 31 O O1 CB3 . . . E 4 49.05 -25.825 34.373 1 31.18 ? O1 CB3 266 X 1 HETATM 32 O O2 CB3 . . . E 4 48.3 -23.884 33.589 1 28.29 ? O2 CB3 266 X 1 HETATM 33 C CP1 CB3 . . . E 4 42.121 -18.273 34.203 1 25.17 ? CP1 CB3 266 X 1 HETATM 34 C CP2 CB3 . . . E 4 43.277 -17.401 34.62 1 23.96 ? CP2 CB3 266 X 1 HETATM 35 C CP3 CB3 . . . E 4 44.211 -16.706 34.876 1 22.86 ? CP3 CB3 266 X 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #