data_2FTP # _model_server_result.job_id OkQh3RHQ_DCOT01cdCN4ug _model_server_result.datetime_utc '2024-12-27 01:21:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ftp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2000}' # _entry.id 2FTP # _exptl.entry_id 2FTP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2FTP _cell.length_a 189.012 _cell.length_b 189.012 _cell.length_c 189.012 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FTP _symmetry.cell_setting ? _symmetry.Int_Tables_number 211 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS dimeric 2 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2 A,B,C,D,E 2 1,3,4,5,6,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 46_544 z+1/2,-y-1/2,x-1/2 0 0 1 0 -1 0 1 0 0 94.506 -94.506 -94.506 3 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 4 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 5 'crystal symmetry operation' 37_544 y+1/2,x-1/2,-z-1/2 0 1 0 1 0 0 0 0 -1 94.506 -94.506 -94.506 6 'crystal symmetry operation' 43_544 -x+1/2,-z-1/2,-y-1/2 -1 0 0 0 0 -1 0 -1 0 94.506 -94.506 -94.506 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 18 A ASP 16 1_555 B NA NA . A NA 3000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc2 A NE2 HIS 209 A HIS 207 1_555 B NA NA . A NA 3000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc3 A NE2 HIS 211 A HIS 209 1_555 B NA NA . A NA 3000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc4 B NA NA . A NA 3000 1_555 E O HOH . A HOH 3187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2FTP _atom_sites.fract_transf_matrix[1][1] 0.005291 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005291 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 3000 3000 NA NA . C 3 GOL A 1 2000 2000 GOL GOL . D 3 GOL A 1 2001 2001 GOL GOL . E 4 HOH A 1 3001 1 HOH HOH . E 4 HOH A 2 3002 2 HOH HOH . E 4 HOH A 3 3003 3 HOH HOH . E 4 HOH A 4 3004 4 HOH HOH . E 4 HOH A 5 3005 5 HOH HOH . E 4 HOH A 6 3006 6 HOH HOH . E 4 HOH A 7 3007 7 HOH HOH . E 4 HOH A 8 3008 8 HOH HOH . E 4 HOH A 9 3009 9 HOH HOH . E 4 HOH A 10 3010 10 HOH HOH . E 4 HOH A 11 3011 11 HOH HOH . E 4 HOH A 12 3012 12 HOH HOH . E 4 HOH A 13 3013 13 HOH HOH . E 4 HOH A 14 3014 14 HOH HOH . E 4 HOH A 15 3015 15 HOH HOH . E 4 HOH A 16 3016 16 HOH HOH . E 4 HOH A 17 3017 17 HOH HOH . E 4 HOH A 18 3018 18 HOH HOH . E 4 HOH A 19 3019 19 HOH HOH . E 4 HOH A 20 3020 20 HOH HOH . E 4 HOH A 21 3021 21 HOH HOH . E 4 HOH A 22 3022 22 HOH HOH . E 4 HOH A 23 3023 23 HOH HOH . E 4 HOH A 24 3024 24 HOH HOH . E 4 HOH A 25 3025 25 HOH HOH . E 4 HOH A 26 3026 26 HOH HOH . E 4 HOH A 27 3027 27 HOH HOH . E 4 HOH A 28 3028 28 HOH HOH . E 4 HOH A 29 3029 29 HOH HOH . E 4 HOH A 30 3030 30 HOH HOH . E 4 HOH A 31 3031 31 HOH HOH . E 4 HOH A 32 3032 32 HOH HOH . E 4 HOH A 33 3033 33 HOH HOH . E 4 HOH A 34 3034 34 HOH HOH . E 4 HOH A 35 3035 35 HOH HOH . E 4 HOH A 36 3036 36 HOH HOH . E 4 HOH A 37 3037 37 HOH HOH . E 4 HOH A 38 3038 38 HOH HOH . E 4 HOH A 39 3039 39 HOH HOH . E 4 HOH A 40 3040 40 HOH HOH . E 4 HOH A 41 3041 41 HOH HOH . E 4 HOH A 42 3042 42 HOH HOH . E 4 HOH A 43 3043 43 HOH HOH . E 4 HOH A 44 3044 44 HOH HOH . E 4 HOH A 45 3045 45 HOH HOH . E 4 HOH A 46 3046 46 HOH HOH . E 4 HOH A 47 3047 47 HOH HOH . E 4 HOH A 48 3048 48 HOH HOH . E 4 HOH A 49 3049 49 HOH HOH . E 4 HOH A 50 3050 50 HOH HOH . E 4 HOH A 51 3051 51 HOH HOH . E 4 HOH A 52 3052 52 HOH HOH . E 4 HOH A 53 3053 53 HOH HOH . E 4 HOH A 54 3054 54 HOH HOH . E 4 HOH A 55 3055 55 HOH HOH . E 4 HOH A 56 3056 56 HOH HOH . E 4 HOH A 57 3057 57 HOH HOH . E 4 HOH A 58 3058 58 HOH HOH . E 4 HOH A 59 3059 59 HOH HOH . E 4 HOH A 60 3060 60 HOH HOH . E 4 HOH A 61 3061 61 HOH HOH . E 4 HOH A 62 3062 62 HOH HOH . E 4 HOH A 63 3063 63 HOH HOH . E 4 HOH A 64 3064 64 HOH HOH . E 4 HOH A 65 3065 65 HOH HOH . E 4 HOH A 66 3066 66 HOH HOH . E 4 HOH A 67 3067 67 HOH HOH . E 4 HOH A 68 3068 68 HOH HOH . E 4 HOH A 69 3069 69 HOH HOH . E 4 HOH A 70 3070 70 HOH HOH . E 4 HOH A 71 3071 71 HOH HOH . E 4 HOH A 72 3072 72 HOH HOH . E 4 HOH A 73 3073 73 HOH HOH . E 4 HOH A 74 3074 74 HOH HOH . E 4 HOH A 75 3075 75 HOH HOH . E 4 HOH A 76 3076 76 HOH HOH . E 4 HOH A 77 3077 77 HOH HOH . E 4 HOH A 78 3078 78 HOH HOH . E 4 HOH A 79 3079 79 HOH HOH . E 4 HOH A 80 3080 80 HOH HOH . E 4 HOH A 81 3081 81 HOH HOH . E 4 HOH A 82 3082 82 HOH HOH . E 4 HOH A 83 3083 83 HOH HOH . E 4 HOH A 84 3084 84 HOH HOH . E 4 HOH A 85 3085 85 HOH HOH . E 4 HOH A 86 3086 86 HOH HOH . E 4 HOH A 87 3087 87 HOH HOH . E 4 HOH A 88 3088 88 HOH HOH . E 4 HOH A 89 3089 89 HOH HOH . E 4 HOH A 90 3090 90 HOH HOH . E 4 HOH A 91 3091 91 HOH HOH . E 4 HOH A 92 3092 92 HOH HOH . E 4 HOH A 93 3093 93 HOH HOH . E 4 HOH A 94 3094 94 HOH HOH . E 4 HOH A 95 3095 95 HOH HOH . E 4 HOH A 96 3096 96 HOH HOH . E 4 HOH A 97 3097 97 HOH HOH . E 4 HOH A 98 3098 98 HOH HOH . E 4 HOH A 99 3099 99 HOH HOH . E 4 HOH A 100 3100 100 HOH HOH . E 4 HOH A 101 3101 101 HOH HOH . E 4 HOH A 102 3102 102 HOH HOH . E 4 HOH A 103 3103 103 HOH HOH . E 4 HOH A 104 3104 104 HOH HOH . E 4 HOH A 105 3105 105 HOH HOH . E 4 HOH A 106 3106 106 HOH HOH . E 4 HOH A 107 3107 107 HOH HOH . E 4 HOH A 108 3108 108 HOH HOH . E 4 HOH A 109 3109 109 HOH HOH . E 4 HOH A 110 3110 110 HOH HOH . E 4 HOH A 111 3111 111 HOH HOH . E 4 HOH A 112 3112 112 HOH HOH . E 4 HOH A 113 3113 113 HOH HOH . E 4 HOH A 114 3114 114 HOH HOH . E 4 HOH A 115 3115 115 HOH HOH . E 4 HOH A 116 3116 116 HOH HOH . E 4 HOH A 117 3117 117 HOH HOH . E 4 HOH A 118 3118 118 HOH HOH . E 4 HOH A 119 3119 119 HOH HOH . E 4 HOH A 120 3120 120 HOH HOH . E 4 HOH A 121 3121 121 HOH HOH . E 4 HOH A 122 3122 122 HOH HOH . E 4 HOH A 123 3123 123 HOH HOH . E 4 HOH A 124 3124 124 HOH HOH . E 4 HOH A 125 3125 125 HOH HOH . E 4 HOH A 126 3126 126 HOH HOH . E 4 HOH A 127 3127 127 HOH HOH . E 4 HOH A 128 3128 128 HOH HOH . E 4 HOH A 129 3129 129 HOH HOH . E 4 HOH A 130 3130 130 HOH HOH . E 4 HOH A 131 3131 131 HOH HOH . E 4 HOH A 132 3132 132 HOH HOH . E 4 HOH A 133 3133 133 HOH HOH . E 4 HOH A 134 3134 134 HOH HOH . E 4 HOH A 135 3135 135 HOH HOH . E 4 HOH A 136 3136 136 HOH HOH . E 4 HOH A 137 3137 137 HOH HOH . E 4 HOH A 138 3138 138 HOH HOH . E 4 HOH A 139 3139 139 HOH HOH . E 4 HOH A 140 3140 140 HOH HOH . E 4 HOH A 141 3141 141 HOH HOH . E 4 HOH A 142 3142 142 HOH HOH . E 4 HOH A 143 3143 143 HOH HOH . E 4 HOH A 144 3144 144 HOH HOH . E 4 HOH A 145 3145 145 HOH HOH . E 4 HOH A 146 3146 146 HOH HOH . E 4 HOH A 147 3147 147 HOH HOH . E 4 HOH A 148 3148 148 HOH HOH . E 4 HOH A 149 3149 149 HOH HOH . E 4 HOH A 150 3150 150 HOH HOH . E 4 HOH A 151 3151 151 HOH HOH . E 4 HOH A 152 3152 152 HOH HOH . E 4 HOH A 153 3153 153 HOH HOH . E 4 HOH A 154 3154 154 HOH HOH . E 4 HOH A 155 3155 155 HOH HOH . E 4 HOH A 156 3156 156 HOH HOH . E 4 HOH A 157 3157 157 HOH HOH . E 4 HOH A 158 3158 158 HOH HOH . E 4 HOH A 159 3159 159 HOH HOH . E 4 HOH A 160 3160 160 HOH HOH . E 4 HOH A 161 3161 161 HOH HOH . E 4 HOH A 162 3162 162 HOH HOH . E 4 HOH A 163 3163 163 HOH HOH . E 4 HOH A 164 3164 164 HOH HOH . E 4 HOH A 165 3165 165 HOH HOH . E 4 HOH A 166 3166 166 HOH HOH . E 4 HOH A 167 3167 167 HOH HOH . E 4 HOH A 168 3168 168 HOH HOH . E 4 HOH A 169 3169 169 HOH HOH . E 4 HOH A 170 3170 170 HOH HOH . E 4 HOH A 171 3171 171 HOH HOH . E 4 HOH A 172 3172 172 HOH HOH . E 4 HOH A 173 3173 173 HOH HOH . E 4 HOH A 174 3174 174 HOH HOH . E 4 HOH A 175 3175 175 HOH HOH . E 4 HOH A 176 3176 176 HOH HOH . E 4 HOH A 177 3177 177 HOH HOH . E 4 HOH A 178 3178 178 HOH HOH . E 4 HOH A 179 3179 179 HOH HOH . E 4 HOH A 180 3180 180 HOH HOH . E 4 HOH A 181 3181 181 HOH HOH . E 4 HOH A 182 3182 182 HOH HOH . E 4 HOH A 183 3183 183 HOH HOH . E 4 HOH A 184 3184 184 HOH HOH . E 4 HOH A 185 3185 185 HOH HOH . E 4 HOH A 186 3186 186 HOH HOH . E 4 HOH A 187 3187 187 HOH HOH . E 4 HOH A 188 3188 188 HOH HOH . E 4 HOH A 189 3189 189 HOH HOH . E 4 HOH A 190 3190 190 HOH HOH . E 4 HOH A 191 3191 191 HOH HOH . E 4 HOH A 192 3192 192 HOH HOH . E 4 HOH A 193 3193 193 HOH HOH . E 4 HOH A 194 3194 194 HOH HOH . E 4 HOH A 195 3195 195 HOH HOH . E 4 HOH A 196 3196 196 HOH HOH . E 4 HOH A 197 3197 197 HOH HOH . E 4 HOH A 198 3198 198 HOH HOH . E 4 HOH A 199 3199 199 HOH HOH . E 4 HOH A 200 3200 200 HOH HOH . E 4 HOH A 201 3201 201 HOH HOH . E 4 HOH A 202 3202 202 HOH HOH . E 4 HOH A 203 3203 203 HOH HOH . E 4 HOH A 204 3204 204 HOH HOH . E 4 HOH A 205 3205 205 HOH HOH . E 4 HOH A 206 3206 206 HOH HOH . E 4 HOH A 207 3207 207 HOH HOH . E 4 HOH A 208 3208 208 HOH HOH . E 4 HOH A 209 3209 209 HOH HOH . E 4 HOH A 210 3210 210 HOH HOH . E 4 HOH A 211 3211 211 HOH HOH . E 4 HOH A 212 3212 212 HOH HOH . E 4 HOH A 213 3213 213 HOH HOH . E 4 HOH A 214 3214 214 HOH HOH . E 4 HOH A 215 3215 215 HOH HOH . E 4 HOH A 216 3216 216 HOH HOH . E 4 HOH A 217 3217 217 HOH HOH . E 4 HOH A 218 3218 218 HOH HOH . E 4 HOH A 219 3219 219 HOH HOH . E 4 HOH A 220 3220 220 HOH HOH . E 4 HOH A 221 3221 221 HOH HOH . E 4 HOH A 222 3222 222 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 17.417 -65.166 -40.144 1 74.95 ? C1 GOL 2000 A 1 HETATM 2 O O1 GOL . . . C 3 17.726 -65.841 -41.34 1 76.83 ? O1 GOL 2000 A 1 HETATM 3 C C2 GOL . . . C 3 17.763 -63.684 -40.28 1 73.78 ? C2 GOL 2000 A 1 HETATM 4 O O2 GOL . . . C 3 18.945 -63.507 -41.037 1 72.64 ? O2 GOL 2000 A 1 HETATM 5 C C3 GOL . . . C 3 17.86 -63.028 -38.9 1 72.5 ? C3 GOL 2000 A 1 HETATM 6 O O3 GOL . . . C 3 16.581 -62.765 -38.35 1 69.6 ? O3 GOL 2000 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #