data_2FV7 # _model_server_result.job_id Sjz4MjyR7HSoCue0JSnmjw _model_server_result.datetime_utc '2024-11-26 03:58:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":404}' # _entry.id 2FV7 # _exptl.entry_id 2FV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.08 _cell.angle_gamma 90 _cell.entry_id 2FV7 _cell.length_a 45.53 _cell.length_b 72.978 _cell.length_c 90.958 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 1 1 A,C,D,E,F,G,H,I,J,K,U 2 1 B,L,M,N,O,P,Q,R,S,T,V 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_745 -x+2,y-1/2,-z -1 0 0 0 1 0 0 0 -1 91.06 -36.489 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 272 A ASP 263 1_555 C NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc2 A O SER 310 A SER 301 1_555 C NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc3 A O ALA 313 A ALA 304 1_555 C NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc4 A OG SER 319 A SER 310 1_555 C NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc5 E O2B ADP . A ADP 401 1_555 D MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc6 C NA NA . A NA 403 1_555 U O HOH . A HOH 878 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc7 C NA NA . A NA 403 1_555 U O HOH . A HOH 879 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc8 D MG MG . A MG 404 1_555 U O HOH . A HOH 817 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc9 D MG MG . A MG 404 1_555 U O HOH . A HOH 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc10 D MG MG . A MG 404 1_555 U O HOH . A HOH 825 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc11 B O ASP 272 B ASP 263 1_555 L NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc12 B O SER 310 B SER 301 1_555 L NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc13 B O ALA 313 B ALA 304 1_555 L NA NA . B NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc14 N O2B ADP . B ADP 402 1_555 M MG MG . B MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc15 L NA NA . B NA 405 1_555 V O HOH . B HOH 845 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc16 L NA NA . B NA 405 1_555 V O HOH . B HOH 853 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc17 M MG MG . B MG 406 1_555 V O HOH . B HOH 842 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc18 M MG MG . B MG 406 1_555 V O HOH . B HOH 859 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc19 M MG MG . B MG 406 1_555 V O HOH . B HOH 864 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc20 M MG MG . B MG 406 1_555 V O HOH . B HOH 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2FV7 _atom_sites.fract_transf_matrix[1][1] 0.021964 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000414 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013703 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010996 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 403 403 NA NA . D 3 MG A 1 404 404 MG MG . E 4 ADP A 1 401 401 ADP ADP . F 5 UNX A 1 501 501 UNX UNX . G 5 UNX A 1 506 506 UNX UNX . H 5 UNX A 1 507 507 UNX UNX . I 5 UNX A 1 508 508 UNX UNX . J 5 UNX A 1 510 510 UNX UNX . K 5 UNX A 1 512 512 UNX UNX . L 2 NA B 1 405 405 NA NA . M 3 MG B 1 406 406 MG MG . N 4 ADP B 1 402 402 ADP ADP . O 5 UNX B 1 502 502 UNX UNX . P 5 UNX B 1 503 503 UNX UNX . Q 5 UNX B 1 504 504 UNX UNX . R 5 UNX B 1 505 505 UNX UNX . S 5 UNX B 1 509 509 UNX UNX . T 5 UNX B 1 511 511 UNX UNX . U 6 HOH A 1 801 801 HOH HOH . U 6 HOH A 2 802 802 HOH HOH . U 6 HOH A 3 804 804 HOH HOH . U 6 HOH A 4 805 805 HOH HOH . U 6 HOH A 5 808 808 HOH HOH . U 6 HOH A 6 811 811 HOH HOH . U 6 HOH A 7 816 816 HOH HOH . U 6 HOH A 8 817 817 HOH HOH . U 6 HOH A 9 819 819 HOH HOH . U 6 HOH A 10 822 822 HOH HOH . U 6 HOH A 11 825 825 HOH HOH . U 6 HOH A 12 826 826 HOH HOH . U 6 HOH A 13 828 828 HOH HOH . U 6 HOH A 14 830 830 HOH HOH . U 6 HOH A 15 832 832 HOH HOH . U 6 HOH A 16 833 833 HOH HOH . U 6 HOH A 17 834 834 HOH HOH . U 6 HOH A 18 835 835 HOH HOH . U 6 HOH A 19 836 836 HOH HOH . U 6 HOH A 20 837 837 HOH HOH . U 6 HOH A 21 838 838 HOH HOH . U 6 HOH A 22 846 846 HOH HOH . U 6 HOH A 23 848 848 HOH HOH . U 6 HOH A 24 849 849 HOH HOH . U 6 HOH A 25 852 852 HOH HOH . U 6 HOH A 26 855 855 HOH HOH . U 6 HOH A 27 856 856 HOH HOH . U 6 HOH A 28 858 858 HOH HOH . U 6 HOH A 29 861 861 HOH HOH . U 6 HOH A 30 862 862 HOH HOH . U 6 HOH A 31 863 863 HOH HOH . U 6 HOH A 32 865 865 HOH HOH . U 6 HOH A 33 867 867 HOH HOH . U 6 HOH A 34 868 868 HOH HOH . U 6 HOH A 35 870 870 HOH HOH . U 6 HOH A 36 875 875 HOH HOH . U 6 HOH A 37 876 876 HOH HOH . U 6 HOH A 38 878 878 HOH HOH . U 6 HOH A 39 879 879 HOH HOH . U 6 HOH A 40 880 880 HOH HOH . V 6 HOH B 1 803 803 HOH HOH . V 6 HOH B 2 806 806 HOH HOH . V 6 HOH B 3 807 807 HOH HOH . V 6 HOH B 4 809 809 HOH HOH . V 6 HOH B 5 810 810 HOH HOH . V 6 HOH B 6 812 812 HOH HOH . V 6 HOH B 7 813 813 HOH HOH . V 6 HOH B 8 814 814 HOH HOH . V 6 HOH B 9 815 815 HOH HOH . V 6 HOH B 10 818 818 HOH HOH . V 6 HOH B 11 820 820 HOH HOH . V 6 HOH B 12 821 821 HOH HOH . V 6 HOH B 13 823 823 HOH HOH . V 6 HOH B 14 824 824 HOH HOH . V 6 HOH B 15 827 827 HOH HOH . V 6 HOH B 16 829 829 HOH HOH . V 6 HOH B 17 831 831 HOH HOH . V 6 HOH B 18 839 839 HOH HOH . V 6 HOH B 19 840 840 HOH HOH . V 6 HOH B 20 841 841 HOH HOH . V 6 HOH B 21 842 842 HOH HOH . V 6 HOH B 22 843 843 HOH HOH . V 6 HOH B 23 844 844 HOH HOH . V 6 HOH B 24 845 845 HOH HOH . V 6 HOH B 25 847 847 HOH HOH . V 6 HOH B 26 850 850 HOH HOH . V 6 HOH B 27 851 851 HOH HOH . V 6 HOH B 28 853 853 HOH HOH . V 6 HOH B 29 854 854 HOH HOH . V 6 HOH B 30 857 857 HOH HOH . V 6 HOH B 31 859 859 HOH HOH . V 6 HOH B 32 860 860 HOH HOH . V 6 HOH B 33 864 864 HOH HOH . V 6 HOH B 34 866 866 HOH HOH . V 6 HOH B 35 869 869 HOH HOH . V 6 HOH B 36 871 871 HOH HOH . V 6 HOH B 37 872 872 HOH HOH . V 6 HOH B 38 873 873 HOH HOH . V 6 HOH B 39 874 874 HOH HOH . V 6 HOH B 40 877 877 HOH HOH . V 6 HOH B 41 881 881 HOH HOH . V 6 HOH B 42 882 882 HOH HOH . V 6 HOH B 43 883 883 HOH HOH . V 6 HOH B 44 884 884 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 29.675 _atom_site.Cartn_y 42.402 _atom_site.Cartn_z -9.766 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 404 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #