data_2FV9
#
_model_server_result.job_id            vKnUrBLTq5NaXkzzHqLAGw 
_model_server_result.datetime_utc      '2024-11-22 11:21:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2fv9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":9}' 
#
_entry.id    2FV9 
#
_exptl.entry_id    2FV9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              415.528 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-3-methyl-L-valyl-N-(2-aminoethyl)-L-alaninamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2FV9 
_cell.length_a            73.799 
_cell.length_b            76.221 
_cell.length_c            102.092 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2FV9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 225 1_555 A SG CYS 116 A CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf2 A SG CYS 148 A CYS 365 1_555 A SG CYS 252 A CYS 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf3 A SG CYS 206 A CYS 423 1_555 A SG CYS 236 A CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf4 B SG CYS 8 B CYS 225 1_555 B SG CYS 116 B CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf5 B SG CYS 148 B CYS 365 1_555 B SG CYS 252 B CYS 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf6 B SG CYS 206 B CYS 423 1_555 B SG CYS 236 B CYS 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc1 C ZN ZN . A ZN 1 1_555 D O INN . A INN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc2 C ZN ZN . A ZN 1 1_555 D O4 INN . A INN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? 
metalc ? metalc3 C ZN ZN . A ZN 1 1_555 A NE2 HIS 188 A HIS 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc4 C ZN ZN . A ZN 1 1_555 A NE2 HIS 192 A HIS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc5 C ZN ZN . A ZN 1 1_555 A NE2 HIS 198 A HIS 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc6 F O2 002 . B 002 2 1_555 E ZN ZN . B ZN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc7 F O3 002 . B 002 2 1_555 E ZN ZN . B ZN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? 
metalc ? metalc8 E ZN ZN . B ZN 4 1_555 B NE2 HIS 188 B HIS 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc9 E ZN ZN . B ZN 4 1_555 B NE2 HIS 192 B HIS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
metalc ? metalc10 E ZN ZN . B ZN 4 1_555 B NE2 HIS 198 B HIS 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
#
_chem_comp.formula           'C19 H37 N5 O5' 
_chem_comp.formula_weight    415.528 
_chem_comp.id                INN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-3-methyl-L-valyl-N-(2-aminoethyl)-L-alaninamide 
_chem_comp.type              peptide-like 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C4 INN sing 240 n n 
N1 C5 INN sing 241 n n 
N1 HN1 INN sing 242 n n 
C2 C1 INN sing 243 n n 
C2 H21 INN sing 244 n n 
C2 H22 INN sing 245 n n 
C2 H23 INN sing 246 n n 
O2 C10 INN doub 247 n n 
N3 C13 INN sing 248 n n 
N3 C14 INN sing 249 n n 
N3 HN3 INN sing 250 n n 
C4 CA INN sing 251 n n 
C4 O1 INN doub 252 n n 
O4 N INN sing 253 n n 
O4 HO4 INN sing 254 n n 
C5 C6 INN sing 255 n n 
C5 C10 INN sing 256 n n 
C5 H5 INN sing 257 n n 
C6 C8 INN sing 258 n n 
C6 C9 INN sing 259 n n 
C6 C7 INN sing 260 n n 
C8 H81 INN sing 261 n n 
C8 H82 INN sing 262 n n 
C8 H83 INN sing 263 n n 
C9 H91 INN sing 264 n n 
C9 H92 INN sing 265 n n 
C9 H93 INN sing 266 n n 
C10 N2 INN sing 267 n n 
C11 C12 INN sing 268 n n 
C11 N2 INN sing 269 n n 
C11 C13 INN sing 270 n n 
C11 H11 INN sing 271 n n 
C12 H121 INN sing 272 n n 
C12 H122 INN sing 273 n n 
C12 H123 INN sing 274 n n 
N C INN sing 275 n n 
N HN INN sing 276 n n 
C O INN doub 277 n n 
C C0 INN sing 278 n n 
C0 CA INN sing 279 n n 
C0 H01 INN sing 280 n n 
C0 H02 INN sing 281 n n 
CA CB INN sing 282 n n 
CA HA INN sing 283 n n 
CB C1 INN sing 284 n n 
CB HB1 INN sing 285 n n 
CB HB2 INN sing 286 n n 
C1 C3 INN sing 287 n n 
C1 H1 INN sing 288 n n 
C3 H31 INN sing 289 n n 
C3 H32 INN sing 290 n n 
C3 H33 INN sing 291 n n 
C7 H71 INN sing 292 n n 
C7 H72 INN sing 293 n n 
C7 H73 INN sing 294 n n 
N2 HN2 INN sing 295 n n 
C13 O3 INN doub 296 n n 
C14 C15 INN sing 297 n n 
C14 H141 INN sing 298 n n 
C14 H142 INN sing 299 n n 
C15 N4 INN sing 300 n n 
C15 H151 INN sing 301 n n 
C15 H152 INN sing 302 n n 
N4 HN41 INN sing 303 n n 
N4 HN42 INN sing 304 n n 
#
_atom_sites.entry_id                     2FV9 
_atom_sites.fract_transf_matrix[1][1]    0.01355 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01312 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009795 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1 1 ZN ZN . 
D 3 INN A 1 9 9 INN INN . 
E 2 ZN B 1 4 4 ZN ZN . 
F 4 002 B 1 2 2 002 002 . 
G 5 HOH A 1 476 1 HOH HOH . 
G 5 HOH A 2 477 2 HOH HOH . 
G 5 HOH A 3 478 5 HOH HOH . 
G 5 HOH A 4 479 7 HOH HOH . 
G 5 HOH A 5 480 8 HOH HOH . 
G 5 HOH A 6 481 10 HOH HOH . 
G 5 HOH A 7 482 11 HOH HOH . 
G 5 HOH A 8 483 15 HOH HOH . 
G 5 HOH A 9 484 18 HOH HOH . 
G 5 HOH A 10 485 19 HOH HOH . 
G 5 HOH A 11 486 21 HOH HOH . 
G 5 HOH A 12 487 22 HOH HOH . 
G 5 HOH A 13 488 25 HOH HOH . 
G 5 HOH A 14 489 27 HOH HOH . 
G 5 HOH A 15 490 28 HOH HOH . 
G 5 HOH A 16 491 29 HOH HOH . 
G 5 HOH A 17 492 30 HOH HOH . 
G 5 HOH A 18 493 32 HOH HOH . 
G 5 HOH A 19 494 34 HOH HOH . 
G 5 HOH A 20 495 36 HOH HOH . 
G 5 HOH A 21 496 39 HOH HOH . 
G 5 HOH A 22 497 45 HOH HOH . 
G 5 HOH A 23 498 47 HOH HOH . 
G 5 HOH A 24 499 48 HOH HOH . 
G 5 HOH A 25 500 50 HOH HOH . 
G 5 HOH A 26 501 54 HOH HOH . 
G 5 HOH A 27 502 55 HOH HOH . 
G 5 HOH A 28 503 56 HOH HOH . 
G 5 HOH A 29 504 61 HOH HOH . 
G 5 HOH A 30 505 65 HOH HOH . 
G 5 HOH A 31 506 69 HOH HOH . 
G 5 HOH A 32 507 78 HOH HOH . 
G 5 HOH A 33 508 79 HOH HOH . 
G 5 HOH A 34 509 82 HOH HOH . 
G 5 HOH A 35 510 87 HOH HOH . 
G 5 HOH A 36 511 88 HOH HOH . 
G 5 HOH A 37 512 89 HOH HOH . 
G 5 HOH A 38 513 90 HOH HOH . 
G 5 HOH A 39 514 94 HOH HOH . 
G 5 HOH A 40 515 98 HOH HOH . 
G 5 HOH A 41 516 102 HOH HOH . 
H 5 HOH B 1 476 3 HOH HOH . 
H 5 HOH B 2 477 4 HOH HOH . 
H 5 HOH B 3 478 6 HOH HOH . 
H 5 HOH B 4 479 9 HOH HOH . 
H 5 HOH B 5 480 12 HOH HOH . 
H 5 HOH B 6 481 13 HOH HOH . 
H 5 HOH B 7 482 14 HOH HOH . 
H 5 HOH B 8 483 16 HOH HOH . 
H 5 HOH B 9 484 17 HOH HOH . 
H 5 HOH B 10 485 20 HOH HOH . 
H 5 HOH B 11 486 23 HOH HOH . 
H 5 HOH B 12 487 24 HOH HOH . 
H 5 HOH B 13 488 26 HOH HOH . 
H 5 HOH B 14 489 31 HOH HOH . 
H 5 HOH B 15 490 33 HOH HOH . 
H 5 HOH B 16 491 35 HOH HOH . 
H 5 HOH B 17 492 37 HOH HOH . 
H 5 HOH B 18 493 38 HOH HOH . 
H 5 HOH B 19 494 40 HOH HOH . 
H 5 HOH B 20 495 41 HOH HOH . 
H 5 HOH B 21 496 42 HOH HOH . 
H 5 HOH B 22 497 43 HOH HOH . 
H 5 HOH B 23 498 44 HOH HOH . 
H 5 HOH B 24 499 46 HOH HOH . 
H 5 HOH B 25 500 49 HOH HOH . 
H 5 HOH B 26 501 51 HOH HOH . 
H 5 HOH B 27 502 52 HOH HOH . 
H 5 HOH B 28 503 53 HOH HOH . 
H 5 HOH B 29 504 57 HOH HOH . 
H 5 HOH B 30 505 58 HOH HOH . 
H 5 HOH B 31 506 59 HOH HOH . 
H 5 HOH B 32 507 60 HOH HOH . 
H 5 HOH B 33 508 62 HOH HOH . 
H 5 HOH B 34 509 63 HOH HOH . 
H 5 HOH B 35 510 64 HOH HOH . 
H 5 HOH B 36 511 66 HOH HOH . 
H 5 HOH B 37 512 67 HOH HOH . 
H 5 HOH B 38 513 68 HOH HOH . 
H 5 HOH B 39 514 70 HOH HOH . 
H 5 HOH B 40 515 71 HOH HOH . 
H 5 HOH B 41 516 72 HOH HOH . 
H 5 HOH B 42 517 73 HOH HOH . 
H 5 HOH B 43 518 74 HOH HOH . 
H 5 HOH B 44 519 75 HOH HOH . 
H 5 HOH B 45 520 76 HOH HOH . 
H 5 HOH B 46 521 77 HOH HOH . 
H 5 HOH B 47 522 80 HOH HOH . 
H 5 HOH B 48 523 81 HOH HOH . 
H 5 HOH B 49 524 83 HOH HOH . 
H 5 HOH B 50 525 84 HOH HOH . 
H 5 HOH B 51 526 85 HOH HOH . 
H 5 HOH B 52 527 86 HOH HOH . 
H 5 HOH B 53 528 91 HOH HOH . 
H 5 HOH B 54 529 92 HOH HOH . 
H 5 HOH B 55 530 93 HOH HOH . 
H 5 HOH B 56 531 95 HOH HOH . 
H 5 HOH B 57 532 96 HOH HOH . 
H 5 HOH B 58 533 97 HOH HOH . 
H 5 HOH B 59 534 99 HOH HOH . 
H 5 HOH B 60 535 100 HOH HOH . 
H 5 HOH B 61 536 101 HOH HOH . 
H 5 HOH B 62 537 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C0 INN . . . D 3 6.123 9.209 23.939 1 35.46 ? C0 INN 9 A 1 
HETATM 2 C C INN . . . D 3 6.879 10.518 23.963 1 34.59 ? C INN 9 A 1 
HETATM 3 O O INN . . . D 3 8.004 10.606 23.461 1 34 ? O INN 9 A 1 
HETATM 4 N N INN . . . D 3 6.23 11.507 24.592 1 33.79 ? N INN 9 A 1 
HETATM 5 O O4 INN . . . D 3 6.811 12.767 24.676 1 33.31 ? O4 INN 9 A 1 
HETATM 6 C C4 INN . . . D 3 6.024 6.839 24.722 1 37.89 ? C4 INN 9 A 1 
HETATM 7 O O1 INN . . . D 3 4.863 6.708 25.114 1 37.93 ? O1 INN 9 A 1 
HETATM 8 C CA INN . . . D 3 6.74 8.174 24.869 1 36.78 ? CA INN 9 A 1 
HETATM 9 C CB INN . . . D 3 6.659 8.633 26.324 1 36.38 ? CB INN 9 A 1 
HETATM 10 C C1 INN . . . D 3 7.486 7.754 27.263 1 36.44 ? C1 INN 9 A 1 
HETATM 11 C C2 INN . . . D 3 8.983 8.026 27.086 1 36.28 ? C2 INN 9 A 1 
HETATM 12 C C3 INN . . . D 3 7.065 7.969 28.715 1 36.24 ? C3 INN 9 A 1 
HETATM 13 N N1 INN . . . D 3 6.783 5.873 24.16 1 39.44 ? N1 INN 9 A 1 
HETATM 14 C C5 INN . . . D 3 6.171 4.591 23.807 1 41.41 ? C5 INN 9 A 1 
HETATM 15 C C6 INN . . . D 3 6.467 4.253 22.33 1 41.57 ? C6 INN 9 A 1 
HETATM 16 C C7 INN . . . D 3 5.928 5.377 21.431 1 41.81 ? C7 INN 9 A 1 
HETATM 17 C C8 INN . . . D 3 7.982 4.113 22.107 1 41.77 ? C8 INN 9 A 1 
HETATM 18 C C9 INN . . . D 3 5.77 2.932 21.954 1 42.16 ? C9 INN 9 A 1 
HETATM 19 C C10 INN . . . D 3 6.612 3.447 24.724 1 42.55 ? C10 INN 9 A 1 
HETATM 20 O O2 INN . . . D 3 7.796 3.279 24.995 1 42.84 ? O2 INN 9 A 1 
HETATM 21 N N2 INN . . . D 3 5.6 2.691 25.193 1 43.91 ? N2 INN 9 A 1 
HETATM 22 C C11 INN . . . D 3 5.903 1.346 25.682 1 45.52 ? C11 INN 9 A 1 
HETATM 23 C C13 INN . . . D 3 5.737 0.253 24.613 1 46.41 ? C13 INN 9 A 1 
HETATM 24 O O3 INN . . . D 3 4.79 0.274 23.82 1 47.24 ? O3 INN 9 A 1 
HETATM 25 C C12 INN . . . D 3 5.027 1.017 26.898 1 45.22 ? C12 INN 9 A 1 
HETATM 26 N N4 INN . . . D 3 5.604 -2.095 21.514 1 48.57 ? N4 INN 9 A 1 
HETATM 27 C C15 INN . . . D 3 6.69 -1.495 22.31 1 47.89 ? C15 INN 9 A 1 
HETATM 28 C C14 INN . . . D 3 6.515 -1.872 23.782 1 47.66 ? C14 INN 9 A 1 
HETATM 29 N N3 INN . . . D 3 6.693 -0.699 24.643 1 47.18 ? N3 INN 9 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#