data_2FVD # _model_server_result.job_id Z5x2e3ahEXef4xIOh0Dh-g _model_server_result.datetime_utc '2025-03-06 06:52:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fvd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":299}' # _entry.id 2FVD # _exptl.entry_id 2FVD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 441.452 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4-AMINO-2-{[1-(METHYLSULFONYL)PIPERIDIN-4-YL]AMINO}PYRIMIDIN-5-YL)(2,3-DIFLUORO-6-METHOXYPHENYL)METHANONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2FVD _cell.length_a 53.506 _cell.length_b 71.647 _cell.length_c 71.692 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FVD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H21 F2 N5 O4 S' _chem_comp.formula_weight 441.452 _chem_comp.id LIA _chem_comp.mon_nstd_flag . _chem_comp.name (4-AMINO-2-{[1-(METHYLSULFONYL)PIPERIDIN-4-YL]AMINO}PYRIMIDIN-5-YL)(2,3-DIFLUORO-6-METHOXYPHENYL)METHANONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 LIA sing 194 n n N1 C6 LIA sing 195 n n N1 S27 LIA sing 196 n n C2 C3 LIA sing 197 n n C2 H21 LIA sing 198 n n C2 H22 LIA sing 199 n n C3 C4 LIA sing 200 n n C3 H31 LIA sing 201 n n C3 H32 LIA sing 202 n n C4 C5 LIA sing 203 n n C4 N7 LIA sing 204 n n C4 H4 LIA sing 205 n n C5 C6 LIA sing 206 n n C5 H51 LIA sing 207 n n C5 H52 LIA sing 208 n n C6 H61 LIA sing 209 n n C6 H62 LIA sing 210 n n N7 C8 LIA sing 211 n n N7 HN7 LIA sing 212 n n C8 N9 LIA doub 213 n y C8 N13 LIA sing 214 n y N9 C10 LIA sing 215 n y C10 C11 LIA doub 216 n y C10 H10 LIA sing 217 n n C11 C12 LIA sing 218 n y C11 C14 LIA sing 219 n n C12 N13 LIA doub 220 n y C12 N26 LIA sing 221 n n C14 O15 LIA doub 222 n n C14 C16 LIA sing 223 n n C16 C17 LIA sing 224 n y C16 C21 LIA doub 225 n y C17 C18 LIA doub 226 n y C17 F24 LIA sing 227 n n C18 C19 LIA sing 228 n y C18 F25 LIA sing 229 n n C19 C20 LIA doub 230 n y C19 H19 LIA sing 231 n n C20 C21 LIA sing 232 n y C20 H20 LIA sing 233 n n C21 O22 LIA sing 234 n n O22 C23 LIA sing 235 n n C23 H231 LIA sing 236 n n C23 H232 LIA sing 237 n n C23 H233 LIA sing 238 n n N26 H261 LIA sing 239 n n N26 H262 LIA sing 240 n n S27 C28 LIA sing 241 n n S27 O29 LIA doub 242 n n S27 O30 LIA doub 243 n n C28 H281 LIA sing 244 n n C28 H282 LIA sing 245 n n C28 H283 LIA sing 246 n n # _atom_sites.entry_id 2FVD _atom_sites.fract_transf_matrix[1][1] 0.018689 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013957 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LIA A 1 299 201 LIA LIA . C 3 HOH A 1 300 1 HOH HOH . C 3 HOH A 2 301 2 HOH HOH . C 3 HOH A 3 302 3 HOH HOH . C 3 HOH A 4 303 4 HOH HOH . C 3 HOH A 5 304 5 HOH HOH . C 3 HOH A 6 305 6 HOH HOH . C 3 HOH A 7 306 7 HOH HOH . C 3 HOH A 8 307 8 HOH HOH . C 3 HOH A 9 308 9 HOH HOH . C 3 HOH A 10 309 10 HOH HOH . C 3 HOH A 11 310 11 HOH HOH . C 3 HOH A 12 311 12 HOH HOH . C 3 HOH A 13 312 13 HOH HOH . C 3 HOH A 14 313 14 HOH HOH . C 3 HOH A 15 314 15 HOH HOH . C 3 HOH A 16 315 16 HOH HOH . C 3 HOH A 17 316 17 HOH HOH . C 3 HOH A 18 317 18 HOH HOH . C 3 HOH A 19 318 19 HOH HOH . C 3 HOH A 20 319 20 HOH HOH . C 3 HOH A 21 320 21 HOH HOH . C 3 HOH A 22 321 22 HOH HOH . C 3 HOH A 23 322 23 HOH HOH . C 3 HOH A 24 323 24 HOH HOH . C 3 HOH A 25 324 25 HOH HOH . C 3 HOH A 26 325 26 HOH HOH . C 3 HOH A 27 326 27 HOH HOH . C 3 HOH A 28 327 28 HOH HOH . C 3 HOH A 29 328 29 HOH HOH . C 3 HOH A 30 329 30 HOH HOH . C 3 HOH A 31 330 31 HOH HOH . C 3 HOH A 32 331 32 HOH HOH . C 3 HOH A 33 332 33 HOH HOH . C 3 HOH A 34 333 34 HOH HOH . C 3 HOH A 35 334 35 HOH HOH . C 3 HOH A 36 335 36 HOH HOH . C 3 HOH A 37 336 37 HOH HOH . C 3 HOH A 38 337 38 HOH HOH . C 3 HOH A 39 338 39 HOH HOH . C 3 HOH A 40 339 40 HOH HOH . C 3 HOH A 41 340 41 HOH HOH . C 3 HOH A 42 341 42 HOH HOH . C 3 HOH A 43 342 43 HOH HOH . C 3 HOH A 44 343 44 HOH HOH . C 3 HOH A 45 344 45 HOH HOH . C 3 HOH A 46 345 46 HOH HOH . C 3 HOH A 47 346 47 HOH HOH . C 3 HOH A 48 347 48 HOH HOH . C 3 HOH A 49 348 49 HOH HOH . C 3 HOH A 50 349 50 HOH HOH . C 3 HOH A 51 350 51 HOH HOH . C 3 HOH A 52 351 52 HOH HOH . C 3 HOH A 53 352 53 HOH HOH . C 3 HOH A 54 353 54 HOH HOH . C 3 HOH A 55 354 55 HOH HOH . C 3 HOH A 56 355 57 HOH HOH . C 3 HOH A 57 356 58 HOH HOH . C 3 HOH A 58 357 59 HOH HOH . C 3 HOH A 59 358 60 HOH HOH . C 3 HOH A 60 359 62 HOH HOH . C 3 HOH A 61 360 63 HOH HOH . C 3 HOH A 62 361 64 HOH HOH . C 3 HOH A 63 362 65 HOH HOH . C 3 HOH A 64 363 66 HOH HOH . C 3 HOH A 65 364 67 HOH HOH . C 3 HOH A 66 365 68 HOH HOH . C 3 HOH A 67 366 69 HOH HOH . C 3 HOH A 68 367 70 HOH HOH . C 3 HOH A 69 368 72 HOH HOH . C 3 HOH A 70 369 73 HOH HOH . C 3 HOH A 71 370 74 HOH HOH . C 3 HOH A 72 371 75 HOH HOH . C 3 HOH A 73 372 76 HOH HOH . C 3 HOH A 74 373 77 HOH HOH . C 3 HOH A 75 374 79 HOH HOH . C 3 HOH A 76 375 83 HOH HOH . C 3 HOH A 77 376 84 HOH HOH . C 3 HOH A 78 377 85 HOH HOH . C 3 HOH A 79 378 86 HOH HOH . C 3 HOH A 80 379 87 HOH HOH . C 3 HOH A 81 380 81 HOH HOH . C 3 HOH A 82 381 88 HOH HOH . C 3 HOH A 83 382 90 HOH HOH . C 3 HOH A 84 383 91 HOH HOH . C 3 HOH A 85 384 92 HOH HOH . C 3 HOH A 86 385 93 HOH HOH . C 3 HOH A 87 386 94 HOH HOH . C 3 HOH A 88 387 95 HOH HOH . C 3 HOH A 89 388 96 HOH HOH . C 3 HOH A 90 389 97 HOH HOH . C 3 HOH A 91 390 98 HOH HOH . C 3 HOH A 92 391 99 HOH HOH . C 3 HOH A 93 392 100 HOH HOH . C 3 HOH A 94 393 101 HOH HOH . C 3 HOH A 95 394 102 HOH HOH . C 3 HOH A 96 395 103 HOH HOH . C 3 HOH A 97 396 104 HOH HOH . C 3 HOH A 98 397 105 HOH HOH . C 3 HOH A 99 398 106 HOH HOH . C 3 HOH A 100 399 107 HOH HOH . C 3 HOH A 101 400 108 HOH HOH . C 3 HOH A 102 401 110 HOH HOH . C 3 HOH A 103 402 111 HOH HOH . C 3 HOH A 104 403 112 HOH HOH . C 3 HOH A 105 404 113 HOH HOH . C 3 HOH A 106 405 114 HOH HOH . C 3 HOH A 107 406 117 HOH HOH . C 3 HOH A 108 407 118 HOH HOH . C 3 HOH A 109 408 119 HOH HOH . C 3 HOH A 110 409 120 HOH HOH . C 3 HOH A 111 410 121 HOH HOH . C 3 HOH A 112 411 122 HOH HOH . C 3 HOH A 113 412 123 HOH HOH . C 3 HOH A 114 413 124 HOH HOH . C 3 HOH A 115 414 125 HOH HOH . C 3 HOH A 116 415 126 HOH HOH . C 3 HOH A 117 416 127 HOH HOH . C 3 HOH A 118 417 128 HOH HOH . C 3 HOH A 119 418 129 HOH HOH . C 3 HOH A 120 419 130 HOH HOH . C 3 HOH A 121 420 131 HOH HOH . C 3 HOH A 122 421 132 HOH HOH . C 3 HOH A 123 422 133 HOH HOH . C 3 HOH A 124 423 134 HOH HOH . C 3 HOH A 125 424 135 HOH HOH . C 3 HOH A 126 425 136 HOH HOH . C 3 HOH A 127 426 137 HOH HOH . C 3 HOH A 128 427 138 HOH HOH . C 3 HOH A 129 428 139 HOH HOH . C 3 HOH A 130 429 140 HOH HOH . C 3 HOH A 131 430 141 HOH HOH . C 3 HOH A 132 431 142 HOH HOH . C 3 HOH A 133 432 143 HOH HOH . C 3 HOH A 134 433 144 HOH HOH . C 3 HOH A 135 434 145 HOH HOH . C 3 HOH A 136 435 146 HOH HOH . C 3 HOH A 137 436 147 HOH HOH . C 3 HOH A 138 437 148 HOH HOH . C 3 HOH A 139 438 149 HOH HOH . C 3 HOH A 140 439 150 HOH HOH . C 3 HOH A 141 440 151 HOH HOH . C 3 HOH A 142 441 152 HOH HOH . C 3 HOH A 143 442 153 HOH HOH . C 3 HOH A 144 443 154 HOH HOH . C 3 HOH A 145 444 155 HOH HOH . C 3 HOH A 146 445 156 HOH HOH . C 3 HOH A 147 446 158 HOH HOH . C 3 HOH A 148 447 159 HOH HOH . C 3 HOH A 149 448 160 HOH HOH . C 3 HOH A 150 449 161 HOH HOH . C 3 HOH A 151 450 162 HOH HOH . C 3 HOH A 152 451 163 HOH HOH . C 3 HOH A 153 452 164 HOH HOH . C 3 HOH A 154 453 165 HOH HOH . C 3 HOH A 155 454 166 HOH HOH . C 3 HOH A 156 455 167 HOH HOH . C 3 HOH A 157 456 168 HOH HOH . C 3 HOH A 158 457 169 HOH HOH . C 3 HOH A 159 458 170 HOH HOH . C 3 HOH A 160 459 171 HOH HOH . C 3 HOH A 161 460 172 HOH HOH . C 3 HOH A 162 461 173 HOH HOH . C 3 HOH A 163 462 174 HOH HOH . C 3 HOH A 164 463 175 HOH HOH . C 3 HOH A 165 464 176 HOH HOH . C 3 HOH A 166 465 177 HOH HOH . C 3 HOH A 167 466 179 HOH HOH . C 3 HOH A 168 467 180 HOH HOH . C 3 HOH A 169 468 181 HOH HOH . C 3 HOH A 170 469 182 HOH HOH . C 3 HOH A 171 470 183 HOH HOH . C 3 HOH A 172 471 184 HOH HOH . C 3 HOH A 173 472 185 HOH HOH . C 3 HOH A 174 473 186 HOH HOH . C 3 HOH A 175 474 187 HOH HOH . C 3 HOH A 176 475 188 HOH HOH . C 3 HOH A 177 476 189 HOH HOH . C 3 HOH A 178 477 191 HOH HOH . C 3 HOH A 179 478 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LIA . . . B 2 6.006 26.497 6.98 1 10.56 ? N1 LIA 299 A 1 HETATM 2 C C2 LIA . . . B 2 5.228 26.235 5.737 1 10.69 ? C2 LIA 299 A 1 HETATM 3 C C3 LIA . . . B 2 4.425 27.497 5.356 1 9.74 ? C3 LIA 299 A 1 HETATM 4 C C4 LIA . . . B 2 3.474 27.912 6.508 1 10.58 ? C4 LIA 299 A 1 HETATM 5 C C5 LIA . . . B 2 4.263 28.022 7.859 1 10.01 ? C5 LIA 299 A 1 HETATM 6 C C6 LIA . . . B 2 5.084 26.743 8.129 1 10.74 ? C6 LIA 299 A 1 HETATM 7 N N7 LIA . . . B 2 2.853 29.193 6.145 1 10.05 ? N7 LIA 299 A 1 HETATM 8 C C8 LIA . . . B 2 1.769 29.532 6.9 1 9.16 ? C8 LIA 299 A 1 HETATM 9 N N9 LIA . . . B 2 1.069 28.596 7.597 1 9.24 ? N9 LIA 299 A 1 HETATM 10 C C10 LIA . . . B 2 0.049 28.949 8.317 1 8.76 ? C10 LIA 299 A 1 HETATM 11 C C11 LIA . . . B 2 -0.4 30.325 8.422 1 9.02 ? C11 LIA 299 A 1 HETATM 12 C C12 LIA . . . B 2 0.364 31.287 7.659 1 8.51 ? C12 LIA 299 A 1 HETATM 13 N N13 LIA . . . B 2 1.437 30.856 6.914 1 7.92 ? N13 LIA 299 A 1 HETATM 14 C C14 LIA . . . B 2 -1.543 30.655 9.26 1 8.9 ? C14 LIA 299 A 1 HETATM 15 O O15 LIA . . . B 2 -1.97 31.821 9.319 1 8.84 ? O15 LIA 299 A 1 HETATM 16 C C16 LIA . . . B 2 -2.197 29.647 10.064 1 10.02 ? C16 LIA 299 A 1 HETATM 17 C C17 LIA . . . B 2 -3.548 29.259 9.75 1 10.79 ? C17 LIA 299 A 1 HETATM 18 C C18 LIA . . . B 2 -4.212 28.257 10.524 1 11.95 ? C18 LIA 299 A 1 HETATM 19 C C19 LIA . . . B 2 -3.548 27.625 11.616 1 11.33 ? C19 LIA 299 A 1 HETATM 20 C C20 LIA . . . B 2 -2.214 27.992 11.95 1 10.6 ? C20 LIA 299 A 1 HETATM 21 C C21 LIA . . . B 2 -1.51 29.004 11.189 1 9.84 ? C21 LIA 299 A 1 HETATM 22 O O22 LIA . . . B 2 -0.188 29.401 11.49 1 9.06 ? O22 LIA 299 A 1 HETATM 23 C C23 LIA . . . B 2 0.555 28.398 12.227 1 7.97 ? C23 LIA 299 A 1 HETATM 24 F F24 LIA . . . B 2 -4.202 29.825 8.74 1 12.32 ? F24 LIA 299 A 1 HETATM 25 F F25 LIA . . . B 2 -5.45 27.907 10.229 1 13.53 ? F25 LIA 299 A 1 HETATM 26 N N26 LIA . . . B 2 0.083 32.603 7.639 1 7.78 ? N26 LIA 299 A 1 HETATM 27 S S27 LIA . . . B 2 7.063 25.211 7.31 1 10.53 ? S27 LIA 299 A 1 HETATM 28 C C28 LIA . . . B 2 6.179 23.662 7.71 1 11.57 ? C28 LIA 299 A 1 HETATM 29 O O29 LIA . . . B 2 7.871 25.586 8.449 1 10.84 ? O29 LIA 299 A 1 HETATM 30 O O30 LIA . . . B 2 7.911 25.002 6.168 1 10.25 ? O30 LIA 299 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 30 #