data_2FZJ # _model_server_result.job_id F8JkyWs9CpA4ig6jAbYvpw _model_server_result.datetime_utc '2024-11-20 08:43:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2fzj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":187}' # _entry.id 2FZJ # _exptl.entry_id 2FZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118 _cell.angle_gamma 90 _cell.entry_id 2FZJ _cell.length_a 41.806 _cell.length_b 61.034 _cell.length_c 43.08 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2FZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 287 n n PA O2A NDP sing 288 n n PA O5B NDP sing 289 n n PA O3 NDP sing 290 n n O2A HOA2 NDP sing 291 n n O5B C5B NDP sing 292 n n C5B C4B NDP sing 293 n n C5B H51A NDP sing 294 n n C5B H52A NDP sing 295 n n C4B O4B NDP sing 296 n n C4B C3B NDP sing 297 n n C4B H4B NDP sing 298 n n O4B C1B NDP sing 299 n n C3B O3B NDP sing 300 n n C3B C2B NDP sing 301 n n C3B H3B NDP sing 302 n n O3B HO3A NDP sing 303 n n C2B O2B NDP sing 304 n n C2B C1B NDP sing 305 n n C2B H2B NDP sing 306 n n O2B P2B NDP sing 307 n n C1B N9A NDP sing 308 n n C1B H1B NDP sing 309 n n N9A C8A NDP sing 310 n y N9A C4A NDP sing 311 n y C8A N7A NDP doub 312 n y C8A H8A NDP sing 313 n n N7A C5A NDP sing 314 n y C5A C6A NDP sing 315 n y C5A C4A NDP doub 316 n y C6A N6A NDP sing 317 n n C6A N1A NDP doub 318 n y N6A H61A NDP sing 319 n n N6A H62A NDP sing 320 n n N1A C2A NDP sing 321 n y C2A N3A NDP doub 322 n y C2A H2A NDP sing 323 n n N3A C4A NDP sing 324 n y O3 PN NDP sing 325 n n PN O1N NDP doub 326 n n PN O2N NDP sing 327 n n PN O5D NDP sing 328 n n O2N H21N NDP sing 329 n n O5D C5D NDP sing 330 n n C5D C4D NDP sing 331 n n C5D H51N NDP sing 332 n n C5D H52N NDP sing 333 n n C4D O4D NDP sing 334 n n C4D C3D NDP sing 335 n n C4D H4D NDP sing 336 n n O4D C1D NDP sing 337 n n C3D O3D NDP sing 338 n n C3D C2D NDP sing 339 n n C3D H3D NDP sing 340 n n O3D HO3N NDP sing 341 n n C2D O2D NDP sing 342 n n C2D C1D NDP sing 343 n n C2D H2D NDP sing 344 n n O2D HO2N NDP sing 345 n n C1D N1N NDP sing 346 n n C1D H1D NDP sing 347 n n N1N C2N NDP sing 348 n n N1N C6N NDP sing 349 n n C2N C3N NDP doub 350 n n C2N H2N NDP sing 351 n n C3N C7N NDP sing 352 n n C3N C4N NDP sing 353 n n C7N O7N NDP doub 354 n n C7N N7N NDP sing 355 n n N7N H71N NDP sing 356 n n N7N H72N NDP sing 357 n n C4N C5N NDP sing 358 n n C4N H41N NDP sing 359 n n C4N H42N NDP sing 360 n n C5N C6N NDP doub 361 n n C5N H5N NDP sing 362 n n C6N H6N NDP sing 363 n n P2B O1X NDP doub 364 n n P2B O2X NDP sing 365 n n P2B O3X NDP sing 366 n n O2X HOP2 NDP sing 367 n n O3X HOP3 NDP sing 368 n n # _atom_sites.entry_id 2FZJ _atom_sites.fract_transf_matrix[1][1] 0.02392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.012718 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 187 187 NDP NAP . C 3 DH3 A 1 188 188 DH3 DH3 . D 4 HOH A 1 190 190 HOH HOH . D 4 HOH A 2 191 191 HOH HOH . D 4 HOH A 3 192 192 HOH HOH . D 4 HOH A 4 193 193 HOH HOH . D 4 HOH A 5 194 194 HOH HOH . D 4 HOH A 6 195 195 HOH HOH . D 4 HOH A 7 196 196 HOH HOH . D 4 HOH A 8 197 197 HOH HOH . D 4 HOH A 9 198 198 HOH HOH . D 4 HOH A 10 199 199 HOH HOH . D 4 HOH A 11 200 200 HOH HOH . D 4 HOH A 12 201 201 HOH HOH . D 4 HOH A 13 202 202 HOH HOH . D 4 HOH A 14 203 203 HOH HOH . D 4 HOH A 15 204 204 HOH HOH . D 4 HOH A 16 205 205 HOH HOH . D 4 HOH A 17 206 206 HOH HOH . D 4 HOH A 18 207 207 HOH HOH . D 4 HOH A 19 208 208 HOH HOH . D 4 HOH A 20 209 209 HOH HOH . D 4 HOH A 21 210 210 HOH HOH . D 4 HOH A 22 211 211 HOH HOH . D 4 HOH A 23 212 212 HOH HOH . D 4 HOH A 24 213 213 HOH HOH . D 4 HOH A 25 214 214 HOH HOH . D 4 HOH A 26 215 215 HOH HOH . D 4 HOH A 27 216 216 HOH HOH . D 4 HOH A 28 217 217 HOH HOH . D 4 HOH A 29 218 218 HOH HOH . D 4 HOH A 30 219 219 HOH HOH . D 4 HOH A 31 220 220 HOH HOH . D 4 HOH A 32 230 230 HOH HOH . D 4 HOH A 33 240 240 HOH HOH . D 4 HOH A 34 250 250 HOH HOH . D 4 HOH A 35 251 251 HOH HOH . D 4 HOH A 36 252 252 HOH HOH . D 4 HOH A 37 253 253 HOH HOH . D 4 HOH A 38 254 254 HOH HOH . D 4 HOH A 39 255 255 HOH HOH . D 4 HOH A 40 256 256 HOH HOH . D 4 HOH A 41 257 257 HOH HOH . D 4 HOH A 42 258 258 HOH HOH . D 4 HOH A 43 259 259 HOH HOH . D 4 HOH A 44 260 260 HOH HOH . D 4 HOH A 45 261 261 HOH HOH . D 4 HOH A 46 262 262 HOH HOH . D 4 HOH A 47 263 263 HOH HOH . D 4 HOH A 48 264 264 HOH HOH . D 4 HOH A 49 265 265 HOH HOH . D 4 HOH A 50 266 266 HOH HOH . D 4 HOH A 51 267 267 HOH HOH . D 4 HOH A 52 268 268 HOH HOH . D 4 HOH A 53 269 269 HOH HOH . D 4 HOH A 54 270 270 HOH HOH . D 4 HOH A 55 271 271 HOH HOH . D 4 HOH A 56 272 272 HOH HOH . D 4 HOH A 57 273 273 HOH HOH . D 4 HOH A 58 274 274 HOH HOH . D 4 HOH A 59 275 275 HOH HOH . D 4 HOH A 60 276 276 HOH HOH . D 4 HOH A 61 277 277 HOH HOH . D 4 HOH A 62 278 278 HOH HOH . D 4 HOH A 63 279 279 HOH HOH . D 4 HOH A 64 280 280 HOH HOH . D 4 HOH A 65 281 281 HOH HOH . D 4 HOH A 66 282 282 HOH HOH . D 4 HOH A 67 283 283 HOH HOH . D 4 HOH A 68 284 284 HOH HOH . D 4 HOH A 69 285 285 HOH HOH . D 4 HOH A 70 286 286 HOH HOH . D 4 HOH A 71 287 287 HOH HOH . D 4 HOH A 72 288 288 HOH HOH . D 4 HOH A 73 289 289 HOH HOH . D 4 HOH A 74 290 290 HOH HOH . D 4 HOH A 75 291 291 HOH HOH . D 4 HOH A 76 292 292 HOH HOH . D 4 HOH A 77 293 293 HOH HOH . D 4 HOH A 78 294 294 HOH HOH . D 4 HOH A 79 295 295 HOH HOH . D 4 HOH A 80 296 296 HOH HOH . D 4 HOH A 81 297 297 HOH HOH . D 4 HOH A 82 298 298 HOH HOH . D 4 HOH A 83 299 299 HOH HOH . D 4 HOH A 84 300 300 HOH HOH . D 4 HOH A 85 301 301 HOH HOH . D 4 HOH A 86 302 302 HOH HOH . D 4 HOH A 87 303 303 HOH HOH . D 4 HOH A 88 304 304 HOH HOH . D 4 HOH A 89 305 305 HOH HOH . D 4 HOH A 90 306 306 HOH HOH . D 4 HOH A 91 307 307 HOH HOH . D 4 HOH A 92 308 308 HOH HOH . D 4 HOH A 93 309 309 HOH HOH . D 4 HOH A 94 310 310 HOH HOH . D 4 HOH A 95 311 311 HOH HOH . D 4 HOH A 96 312 312 HOH HOH . D 4 HOH A 97 313 313 HOH HOH . D 4 HOH A 98 314 314 HOH HOH . D 4 HOH A 99 315 315 HOH HOH . D 4 HOH A 100 316 316 HOH HOH . D 4 HOH A 101 317 317 HOH HOH . D 4 HOH A 102 318 318 HOH HOH . D 4 HOH A 103 319 319 HOH HOH . D 4 HOH A 104 320 320 HOH HOH . D 4 HOH A 105 321 321 HOH HOH . D 4 HOH A 106 322 322 HOH HOH . D 4 HOH A 107 323 323 HOH HOH . D 4 HOH A 108 324 324 HOH HOH . D 4 HOH A 109 325 325 HOH HOH . D 4 HOH A 110 326 326 HOH HOH . D 4 HOH A 111 327 327 HOH HOH . D 4 HOH A 112 328 328 HOH HOH . D 4 HOH A 113 329 329 HOH HOH . D 4 HOH A 114 330 330 HOH HOH . D 4 HOH A 115 331 331 HOH HOH . D 4 HOH A 116 332 332 HOH HOH . D 4 HOH A 117 333 333 HOH HOH . D 4 HOH A 118 334 334 HOH HOH . D 4 HOH A 119 335 335 HOH HOH . D 4 HOH A 120 336 336 HOH HOH . D 4 HOH A 121 337 337 HOH HOH . D 4 HOH A 122 338 338 HOH HOH . D 4 HOH A 123 339 339 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 2.359 8.618 16.78 1 22.28 ? PA NDP 187 A 1 HETATM 2 O O1A NDP . . . B 2 3.37 8.022 15.863 1 26.61 ? O1A NDP 187 A 1 HETATM 3 O O2A NDP . . . B 2 0.988 8.824 16.311 1 22.45 ? O2A NDP 187 A 1 HETATM 4 O O5B NDP . . . B 2 3.072 10.11 17.275 1 24.31 ? O5B NDP 187 A 1 HETATM 5 C C5B NDP . . . B 2 2.215 11.366 17.31 1 20.18 ? C5B NDP 187 A 1 HETATM 6 C C4B NDP . . . B 2 3.015 12.416 16.533 1 20.16 ? C4B NDP 187 A 1 HETATM 7 O O4B NDP . . . B 2 2.871 12.208 15.295 1 17.26 ? O4B NDP 187 A 1 HETATM 8 C C3B NDP . . . B 2 2.417 13.881 16.772 1 16.8 ? C3B NDP 187 A 1 HETATM 9 O O3B NDP . . . B 2 3.201 14.271 17.97 1 18.25 ? O3B NDP 187 A 1 HETATM 10 C C2B NDP . . . B 2 2.756 14.422 15.353 1 16.62 ? C2B NDP 187 A 1 HETATM 11 O O2B NDP . . . B 2 4.066 14.807 15.12 1 15.65 ? O2B NDP 187 A 1 HETATM 12 C C1B NDP . . . B 2 2.279 13.283 14.478 1 16.72 ? C1B NDP 187 A 1 HETATM 13 N N9A NDP . . . B 2 0.853 13.232 14.144 1 18.31 ? N9A NDP 187 A 1 HETATM 14 C C8A NDP . . . B 2 -0.098 12.292 14.552 1 19.8 ? C8A NDP 187 A 1 HETATM 15 N N7A NDP . . . B 2 -1.31 12.528 14.072 1 19.3 ? N7A NDP 187 A 1 HETATM 16 C C5A NDP . . . B 2 -1.06 13.72 13.321 1 19.3 ? C5A NDP 187 A 1 HETATM 17 C C6A NDP . . . B 2 -1.961 14.651 12.428 1 19.5 ? C6A NDP 187 A 1 HETATM 18 N N6A NDP . . . B 2 -3.269 14.306 12.33 1 18.26 ? N6A NDP 187 A 1 HETATM 19 N N1A NDP . . . B 2 -1.385 15.778 11.794 1 19.83 ? N1A NDP 187 A 1 HETATM 20 C C2A NDP . . . B 2 -0.056 15.982 11.991 1 18.55 ? C2A NDP 187 A 1 HETATM 21 N N3A NDP . . . B 2 0.807 15.259 12.725 1 16.68 ? N3A NDP 187 A 1 HETATM 22 C C4A NDP . . . B 2 0.223 14.118 13.37 1 17.08 ? C4A NDP 187 A 1 HETATM 23 O O3 NDP . . . B 2 2.409 7.868 18.113 1 30.48 ? O3 NDP 187 A 1 HETATM 24 P PN NDP . . . B 2 1.754 7.767 19.538 1 33.5 ? PN NDP 187 A 1 HETATM 25 O O1N NDP . . . B 2 0.347 7.875 19.409 1 33.91 ? O1N NDP 187 A 1 HETATM 26 O O2N NDP . . . B 2 2.312 8.745 20.506 1 36.27 ? O2N NDP 187 A 1 HETATM 27 O O5D NDP . . . B 2 2.285 6.326 20.087 1 36.38 ? O5D NDP 187 A 1 HETATM 28 C C5D NDP . . . B 2 3.458 5.957 20.008 1 35.24 ? C5D NDP 187 A 1 HETATM 29 C C4D NDP . . . B 2 3.514 4.581 20.643 1 34.12 ? C4D NDP 187 A 1 HETATM 30 O O4D NDP . . . B 2 2.629 3.691 19.792 1 32.99 ? O4D NDP 187 A 1 HETATM 31 C C3D NDP . . . B 2 4.921 3.864 20.7 1 33.88 ? C3D NDP 187 A 1 HETATM 32 O O3D NDP . . . B 2 5.237 2.946 21.782 1 34.3 ? O3D NDP 187 A 1 HETATM 33 C C2D NDP . . . B 2 4.817 3.055 19.37 1 33.21 ? C2D NDP 187 A 1 HETATM 34 O O2D NDP . . . B 2 5.716 1.976 19.234 1 32.72 ? O2D NDP 187 A 1 HETATM 35 C C1D NDP . . . B 2 3.48 2.554 19.428 1 31.55 ? C1D NDP 187 A 1 HETATM 36 N N1N NDP . . . B 2 2.872 1.73 18.277 1 30.26 ? N1N NDP 187 A 1 HETATM 37 C C2N NDP . . . B 2 2.214 0.435 18.649 1 28.97 ? C2N NDP 187 A 1 HETATM 38 C C3N NDP . . . B 2 1.648 -0.286 17.594 1 27.32 ? C3N NDP 187 A 1 HETATM 39 C C7N NDP . . . B 2 0.941 -1.641 17.911 1 26.06 ? C7N NDP 187 A 1 HETATM 40 O O7N NDP . . . B 2 0.493 -2.137 16.889 1 24.03 ? O7N NDP 187 A 1 HETATM 41 N N7N NDP . . . B 2 0.897 -2.087 19.179 1 25.47 ? N7N NDP 187 A 1 HETATM 42 C C4N NDP . . . B 2 1.699 0.254 16.07 1 26.76 ? C4N NDP 187 A 1 HETATM 43 C C5N NDP . . . B 2 2.427 1.604 15.909 1 26.86 ? C5N NDP 187 A 1 HETATM 44 C C6N NDP . . . B 2 2.955 2.26 16.966 1 28.4 ? C6N NDP 187 A 1 HETATM 45 P P2B NDP . . . B 2 5.113 16.009 15.744 1 16.76 ? P2B NDP 187 A 1 HETATM 46 O O1X NDP . . . B 2 4.249 17.127 15.129 1 15.02 ? O1X NDP 187 A 1 HETATM 47 O O2X NDP . . . B 2 6.348 15.83 15.022 1 13.71 ? O2X NDP 187 A 1 HETATM 48 O O3X NDP . . . B 2 4.974 15.952 17.189 1 14.55 ? O3X NDP 187 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #