data_2G00 # _model_server_result.job_id PqRUs_bYICj9qyvhKmsN2w _model_server_result.datetime_utc '2024-12-12 20:17:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g00 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":711}' # _entry.id 2G00 # _exptl.entry_id 2G00 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 533.544 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3-[6-{2'-[(DIMETHYLAMINO)METHYL]BIPHENYL-4-YL}-7-OXO-3-(TRIFLUOROMETHYL)-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3,4-C]PYRIDIN-1-YL]BENZAMIDE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G00 _cell.length_a 56.6 _cell.length_b 72.4 _cell.length_c 78.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G00 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 46 L CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? disulf ? disulf6 B SG CYS 3 L CYS 89 1_555 B SG CYS 14 L CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? disulf ? disulf7 B SG CYS 10 L CYS 96 1_555 B SG CYS 23 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? disulf ? disulf8 B SG CYS 25 L CYS 111 1_555 B SG CYS 38 L CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? # _chem_comp.formula 'C29 H26 F3 N5 O2' _chem_comp.formula_weight 533.544 _chem_comp.id 4QC _chem_comp.mon_nstd_flag . _chem_comp.name "3-[6-{2'-[(DIMETHYLAMINO)METHYL]BIPHENYL-4-YL}-7-OXO-3-(TRIFLUOROMETHYL)-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3,4-C]PYRIDIN-1-YL]BENZAMIDE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 4QC sing 1 n n C1 C 4QC sing 2 n y C1 C6 4QC doub 3 n y C2 O2 4QC doub 4 n n C2 N1 4QC sing 5 n n C3 C 4QC doub 6 n y C3 C4 4QC sing 7 n y C3 H3 4QC sing 8 n n C7 C8 4QC sing 9 n y C7 C10 4QC sing 10 n n C7 N3 4QC doub 11 n y C8 C9 4QC doub 12 n y C8 C24 4QC sing 13 n n C9 C13 4QC sing 14 n n C9 N2 4QC sing 15 n y C10 F 4QC sing 16 n n C10 F1 4QC sing 17 n n C10 F2 4QC sing 18 n n C11 C25 4QC sing 19 n n C11 N7 4QC sing 20 n n C11 H111 4QC sing 21 n n C11 H112 4QC sing 22 n n C12 C24 4QC sing 23 n n C12 N4 4QC sing 24 n n C12 H121 4QC sing 25 n n C12 H122 4QC sing 26 n n C13 O1 4QC doub 27 n n C13 N4 4QC sing 28 n n C14 C15 4QC sing 29 n y C14 C19 4QC doub 30 n y C14 N4 4QC sing 31 n n C15 C16 4QC doub 32 n y C15 H15 4QC sing 33 n n C16 C17 4QC sing 34 n y C16 H16 4QC sing 35 n n C19 C18 4QC sing 36 n y C19 H19 4QC sing 37 n n C20 N7 4QC sing 38 n n C20 H201 4QC sing 39 n n C20 H202 4QC sing 40 n n C20 H203 4QC sing 41 n n C21 C22 4QC sing 42 n y C21 C27 4QC doub 43 n y C21 H21 4QC sing 44 n n C22 C28 4QC doub 45 n y C22 H22 4QC sing 46 n n C24 H241 4QC sing 47 n n C24 H242 4QC sing 48 n n C27 C17 4QC sing 49 n y C27 C25 4QC sing 50 n y N2 N3 4QC sing 51 n y N2 C5 4QC sing 52 n y C H 4QC sing 53 n n C4 C5 4QC doub 54 n y C4 H4 4QC sing 55 n n C5 C6 4QC sing 56 n y C6 H6 4QC sing 57 n n C17 C18 4QC doub 58 n y C18 H18 4QC sing 59 n n C25 C29 4QC doub 60 n y N7 C23 4QC sing 61 n n C23 H231 4QC sing 62 n n C23 H232 4QC sing 63 n n C23 H233 4QC sing 64 n n N1 HN11 4QC sing 65 n n N1 HN12 4QC sing 66 n n C28 C29 4QC sing 67 n y C28 H28 4QC sing 68 n n C29 H29 4QC sing 69 n n # _atom_sites.entry_id 2G00 _atom_sites.fract_transf_matrix[1][1] 0.01767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01381 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id 4QC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 711 _pdbx_nonpoly_scheme.auth_seq_num 711 _pdbx_nonpoly_scheme.pdb_mon_id 4QC _pdbx_nonpoly_scheme.auth_mon_id 4QC _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4QC . . . C 3 17.942 8.09 52.861 1 23.91 ? C1 4QC 711 A 1 HETATM 2 C C2 4QC . . . C 3 17.335 7.323 51.774 1 23.25 ? C2 4QC 711 A 1 HETATM 3 C C3 4QC . . . C 3 17.789 9.86 54.594 1 23.81 ? C3 4QC 711 A 1 HETATM 4 C C7 4QC . . . C 3 23.633 8.604 54.041 1 34.56 ? C7 4QC 711 A 1 HETATM 5 C C8 4QC . . . C 3 23.375 7.69 55.082 1 35.17 ? C8 4QC 711 A 1 HETATM 6 C C9 4QC . . . C 3 21.998 7.671 55.332 1 35.16 ? C9 4QC 711 A 1 HETATM 7 C C10 4QC . . . C 3 25.034 8.976 53.574 1 34.42 ? C10 4QC 711 A 1 HETATM 8 C C11 4QC . . . C 3 21.71 2.774 62.715 1 36.71 ? C11 4QC 711 A 1 HETATM 9 C C12 4QC . . . C 3 23.698 6.419 57.188 1 35.31 ? C12 4QC 711 A 1 HETATM 10 C C13 4QC . . . C 3 21.43 6.899 56.385 1 36.5 ? C13 4QC 711 A 1 HETATM 11 C C14 4QC . . . C 3 21.63 5.212 58.003 1 33.6 ? C14 4QC 711 A 1 HETATM 12 C C15 4QC . . . C 3 20.893 5.666 59.216 1 31.91 ? C15 4QC 711 A 1 HETATM 13 C C16 4QC . . . C 3 20.308 4.661 60.101 1 32.5 ? C16 4QC 711 A 1 HETATM 14 C C19 4QC . . . C 3 21.69 3.772 57.653 1 32.34 ? C19 4QC 711 A 1 HETATM 15 C C20 4QC . . . C 3 23.022 1.541 64.582 1 36.98 ? C20 4QC 711 A 1 HETATM 16 C C21 4QC . . . C 3 18.744 1.364 60.419 1 31.92 ? C21 4QC 711 A 1 HETATM 17 C C22 4QC . . . C 3 18.115 0.467 61.398 1 33.73 ? C22 4QC 711 A 1 HETATM 18 C C24 4QC . . . C 3 24.28 6.715 55.814 1 35.95 ? C24 4QC 711 A 1 HETATM 19 C C27 4QC . . . C 3 19.9 2.188 60.822 1 31.02 ? C27 4QC 711 A 1 HETATM 20 F F 4QC . . . C 3 25.504 7.925 52.982 1 34.55 ? F 4QC 711 A 1 HETATM 21 F F1 4QC . . . C 3 25.818 9.332 54.58 1 33.66 ? F1 4QC 711 A 1 HETATM 22 F F2 4QC . . . C 3 24.94 9.973 52.72 1 35.13 ? F2 4QC 711 A 1 HETATM 23 O O1 4QC . . . C 3 20.219 6.892 56.643 1 39.19 ? O1 4QC 711 A 1 HETATM 24 N N2 4QC . . . C 3 21.413 8.522 54.417 1 31.48 ? N2 4QC 711 A 1 HETATM 25 N N3 4QC . . . C 3 22.425 9.085 53.656 1 33.08 ? N3 4QC 711 A 1 HETATM 26 N N4 4QC . . . C 3 22.251 6.133 57.153 1 35.11 ? N4 4QC 711 A 1 HETATM 27 C C 4QC . . . C 3 17.129 9.061 53.58 1 22.83 ? C 4QC 711 A 1 HETATM 28 C C4 4QC . . . C 3 19.221 9.668 54.867 1 24.93 ? C4 4QC 711 A 1 HETATM 29 C C5 4QC . . . C 3 20.042 8.685 54.144 1 27.68 ? C5 4QC 711 A 1 HETATM 30 C C6 4QC . . . C 3 19.381 7.876 53.119 1 25.75 ? C6 4QC 711 A 1 HETATM 31 C C17 4QC . . . C 3 20.442 3.203 59.806 1 32.46 ? C17 4QC 711 A 1 HETATM 32 C C18 4QC . . . C 3 21.101 2.773 58.543 1 32.39 ? C18 4QC 711 A 1 HETATM 33 C C25 4QC . . . C 3 20.401 2.029 62.227 1 36.05 ? C25 4QC 711 A 1 HETATM 34 N N7 4QC . . . C 3 22.277 2.736 64.11 1 36.27 ? N7 4QC 711 A 1 HETATM 35 C C23 4QC . . . C 3 23.133 3.891 64.455 1 35.06 ? C23 4QC 711 A 1 HETATM 36 O O2 4QC . . . C 3 15.927 7.236 51.386 1 26.34 ? O2 4QC 711 A 1 HETATM 37 N N1 4QC . . . C 3 18.183 6.663 51.085 1 25.5 ? N1 4QC 711 A 1 HETATM 38 C C28 4QC . . . C 3 18.579 0.326 62.798 1 34.02 ? C28 4QC 711 A 1 HETATM 39 C C29 4QC . . . C 3 19.738 1.135 63.189 1 35.25 ? C29 4QC 711 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 39 #