data_2G0E # _model_server_result.job_id FtvD1PtVB51zXf02Ms8-Iw _model_server_result.datetime_utc '2024-10-15 06:14:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g0e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":3025}' # _entry.id 2G0E # _exptl.entry_id 2G0E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.417 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3-[C-[N'-(3-CARBAMIMIDOYL-BENZYLIDENIUM)-HYDRAZINO]-[[AMINOMETHYLIDENE]AMINIUM]-IMINOMETHYL]-BENZAMIDINIUM" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G0E _cell.length_a 170.47 _cell.length_b 170.47 _cell.length_c 94.05 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G0E _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS dimeric 2 author_and_software_defined_assembly 1 PISA,PQS dimeric 2 author_and_software_defined_assembly 2 PISA hexadecameric 16 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,L,M,N,O,P,Q,R,S,T,AA,CA 1 1 B,D,F,G,H,I,J,K,U,V,W,X,Y,Z,BA,DA 2 1 B,D,F,G,H,I,J,K,U,V,W,X,Y,Z,BA,DA 3 1,2,3,4 A,C,E,L,M,N,O,P,Q,R,S,T,AA,CA 3 5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 94.05 4 'crystal symmetry operation' 8_556 -y,-x,-z+1 0 -1 0 -1 0 0 0 0 -1 0 0 94.05 5 'crystal symmetry operation' 3_455 -y-1/2,x+1/2,z+1/2 0 -1 0 1 0 0 0 0 1 -85.235 85.235 47.025 6 'crystal symmetry operation' 4_545 y+1/2,-x-1/2,z+1/2 0 1 0 -1 0 0 0 0 1 85.235 -85.235 47.025 7 'crystal symmetry operation' 5_455 -x-1/2,y+1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 -85.235 85.235 47.025 8 'crystal symmetry operation' 6_545 x+1/2,-y-1/2,-z+1/2 1 0 0 0 -1 0 0 0 -1 85.235 -85.235 47.025 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H22 N9 3' _chem_comp.formula_weight 352.417 _chem_comp.id CGQ _chem_comp.mon_nstd_flag . _chem_comp.name "3-[C-[N'-(3-CARBAMIMIDOYL-BENZYLIDENIUM)-HYDRAZINO]-[[AMINOMETHYLIDENE]AMINIUM]-IMINOMETHYL]-BENZAMIDINIUM" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CGP40215A;BIS[[3-(AMINOIMINOMETHYL)PHENYL]METHYLENE] CARBONIMIDIC DIHYDRAZIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CGQ doub 70 n y C1 C6 CGQ sing 71 n y C1 C9 CGQ sing 72 n n C2 C3 CGQ sing 73 n y C2 H21 CGQ sing 74 n n C3 C4 CGQ doub 75 n y C3 C7 CGQ sing 76 n n C4 C5 CGQ sing 77 n y C4 H41 CGQ sing 78 n n C5 C6 CGQ doub 79 n y C5 H51 CGQ sing 80 n n C6 H61 CGQ sing 81 n n C7 N8 CGQ doub 82 e n C7 H71 CGQ sing 83 n n N8 N12 CGQ sing 84 n n C9 N10 CGQ doub 85 n n C9 N11 CGQ sing 86 n n N10 H101 CGQ sing 87 n n N10 H102 CGQ sing 88 n n N11 H111 CGQ sing 89 n n N11 H112 CGQ sing 90 n n N12 C13 CGQ sing 91 n n N12 H121 CGQ sing 92 n n C13 N15 CGQ sing 93 n n C13 N19 CGQ doub 94 e n N15 H151 CGQ sing 95 n n N15 H152 CGQ sing 96 n n N19 N20 CGQ sing 97 n n N19 H191 CGQ sing 98 n n N20 C21 CGQ doub 99 n n C21 C22 CGQ sing 100 n n C21 H211 CGQ sing 101 n n C22 C23 CGQ doub 102 n y C22 C27 CGQ sing 103 n y C23 C24 CGQ sing 104 n y C23 H231 CGQ sing 105 n n C24 C25 CGQ doub 106 n y C24 H241 CGQ sing 107 n n C25 C26 CGQ sing 108 n y C25 H251 CGQ sing 109 n n C26 C27 CGQ doub 110 n y C26 C28 CGQ sing 111 n n C27 H271 CGQ sing 112 n n C28 N29 CGQ doub 113 n n C28 N30 CGQ sing 114 n n N29 H291 CGQ sing 115 n n N29 H292 CGQ sing 116 n n N30 H301 CGQ sing 117 n n N30 H302 CGQ sing 118 n n # _atom_sites.entry_id 2G0E _atom_sites.fract_transf_matrix[1][1] 0.005866 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005866 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 199 199 SO4 SO4 . F 2 SO4 B 1 270 270 SO4 SO4 . G 2 SO4 B 1 999 999 SO4 SO4 . H 2 SO4 B 1 899 899 SO4 SO4 . I 2 SO4 B 1 601 601 SO4 SO4 . J 2 SO4 B 1 779 779 SO4 SO4 . K 2 SO4 B 1 780 780 SO4 SO4 . L 3 CGQ D 1 3025 3025 CGQ CGQ . M 2 SO4 D 1 699 699 SO4 SO4 . N 2 SO4 D 1 299 299 SO4 SO4 . O 2 SO4 D 1 801 801 SO4 SO4 . P 2 SO4 D 1 279 279 SO4 SO4 . Q 2 SO4 D 1 599 599 SO4 SO4 . R 2 SO4 D 1 800 800 SO4 SO4 . S 2 SO4 D 1 501 501 SO4 SO4 . T 2 SO4 D 1 220 220 SO4 SO4 . U 2 SO4 E 1 799 799 SO4 SO4 . V 2 SO4 E 1 900 900 SO4 SO4 . W 2 SO4 E 1 249 249 SO4 SO4 . X 2 SO4 E 1 239 239 SO4 SO4 . Y 2 SO4 E 1 399 399 SO4 SO4 . Z 2 SO4 E 1 289 289 SO4 SO4 . AA 4 HOH A 1 200 3 HOH HOH . AA 4 HOH A 2 201 7 HOH HOH . AA 4 HOH A 3 202 8 HOH HOH . AA 4 HOH A 4 203 9 HOH HOH . AA 4 HOH A 5 204 11 HOH HOH . BA 4 HOH B 1 1000 13 HOH HOH . BA 4 HOH B 2 1001 15 HOH HOH . BA 4 HOH B 3 1002 16 HOH HOH . BA 4 HOH B 4 1003 17 HOH HOH . BA 4 HOH B 5 1004 19 HOH HOH . BA 4 HOH B 6 1005 39 HOH HOH . CA 4 HOH D 1 3026 37 HOH HOH . CA 4 HOH D 2 3027 1 HOH HOH . CA 4 HOH D 3 3028 2 HOH HOH . CA 4 HOH D 4 3029 4 HOH HOH . CA 4 HOH D 5 3030 5 HOH HOH . CA 4 HOH D 6 3031 26 HOH HOH . CA 4 HOH D 7 3032 27 HOH HOH . CA 4 HOH D 8 3033 28 HOH HOH . CA 4 HOH D 9 3034 29 HOH HOH . CA 4 HOH D 10 3035 30 HOH HOH . CA 4 HOH D 11 3036 31 HOH HOH . CA 4 HOH D 12 3037 32 HOH HOH . CA 4 HOH D 13 3038 33 HOH HOH . CA 4 HOH D 14 3039 34 HOH HOH . CA 4 HOH D 15 3040 35 HOH HOH . CA 4 HOH D 16 3041 36 HOH HOH . DA 4 HOH E 1 901 6 HOH HOH . DA 4 HOH E 2 902 10 HOH HOH . DA 4 HOH E 3 903 12 HOH HOH . DA 4 HOH E 4 904 18 HOH HOH . DA 4 HOH E 5 905 20 HOH HOH . DA 4 HOH E 6 906 21 HOH HOH . DA 4 HOH E 7 907 22 HOH HOH . DA 4 HOH E 8 908 23 HOH HOH . DA 4 HOH E 9 909 24 HOH HOH . DA 4 HOH E 10 910 25 HOH HOH . DA 4 HOH E 11 911 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CGQ . . . L 3 -60.113 -45.424 -1.02 1 200.44 ? C1 CGQ 3025 D 1 HETATM 2 C C2 CGQ . . . L 3 -59.951 -45.162 0.338 1 200.24 ? C2 CGQ 3025 D 1 HETATM 3 C C3 CGQ . . . L 3 -60.946 -45.529 1.24 1 199.97 ? C3 CGQ 3025 D 1 HETATM 4 C C4 CGQ . . . L 3 -62.107 -46.147 0.785 1 199.91 ? C4 CGQ 3025 D 1 HETATM 5 C C5 CGQ . . . L 3 -62.272 -46.414 -0.57 1 200.16 ? C5 CGQ 3025 D 1 HETATM 6 C C6 CGQ . . . L 3 -61.271 -46.054 -1.467 1 200.59 ? C6 CGQ 3025 D 1 HETATM 7 C C7 CGQ . . . L 3 -60.758 -45.349 2.606 1 199.45 ? C7 CGQ 3025 D 1 HETATM 8 N N8 CGQ . . . L 3 -61.701 -45.776 3.424 1 199.04 ? N8 CGQ 3025 D 1 HETATM 9 C C9 CGQ . . . L 3 -59.141 -45.032 -1.934 1 200.52 ? C9 CGQ 3025 D 1 HETATM 10 N N10 CGQ . . . L 3 -58.058 -44.379 -1.524 1 200.07 ? N10 CGQ 3025 D 1 HETATM 11 N N11 CGQ . . . L 3 -59.288 -45.305 -3.228 1 200.69 ? N11 CGQ 3025 D 1 HETATM 12 N N12 CGQ . . . L 3 -61.61 -45.673 4.646 1 198.65 ? N12 CGQ 3025 D 1 HETATM 13 C C13 CGQ . . . L 3 -62.622 -46.129 5.379 1 198.48 ? C13 CGQ 3025 D 1 HETATM 14 N N15 CGQ . . . L 3 -63.68 -46.658 4.773 1 198.24 ? N15 CGQ 3025 D 1 HETATM 15 N N19 CGQ . . . L 3 -62.593 -46.066 6.706 1 198.39 ? N19 CGQ 3025 D 1 HETATM 16 N N20 CGQ . . . L 3 -63.671 -46.541 7.386 1 199.09 ? N20 CGQ 3025 D 1 HETATM 17 C C21 CGQ . . . L 3 -63.494 -46.459 8.701 1 199.83 ? C21 CGQ 3025 D 1 HETATM 18 C C22 CGQ . . . L 3 -64.589 -46.584 9.548 1 200.44 ? C22 CGQ 3025 D 1 HETATM 19 C C23 CGQ . . . L 3 -64.402 -46.581 10.926 1 200.69 ? C23 CGQ 3025 D 1 HETATM 20 C C24 CGQ . . . L 3 -65.484 -46.778 11.781 1 200.69 ? C24 CGQ 3025 D 1 HETATM 21 C C25 CGQ . . . L 3 -66.757 -46.971 11.256 1 200.69 ? C25 CGQ 3025 D 1 HETATM 22 C C26 CGQ . . . L 3 -66.951 -46.969 9.877 1 200.5 ? C26 CGQ 3025 D 1 HETATM 23 C C27 CGQ . . . L 3 -65.867 -46.78 9.027 1 200.69 ? C27 CGQ 3025 D 1 HETATM 24 C C28 CGQ . . . L 3 -68.233 -47.123 9.357 1 200.14 ? C28 CGQ 3025 D 1 HETATM 25 N N29 CGQ . . . L 3 -69.284 -47.158 10.171 1 199.49 ? N29 CGQ 3025 D 1 HETATM 26 N N30 CGQ . . . L 3 -68.415 -47.239 8.045 1 200.01 ? N30 CGQ 3025 D 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #