data_2G24
#
_model_server_result.job_id            on26SqJixTGdDCW5DJubhA 
_model_server_result.datetime_utc      '2024-12-26 17:51:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2g24 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":334}' 
#
_entry.id    2G24 
#
_exptl.entry_id    2G24 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              355.384 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-{4-[(3,5-DIFLUOROBENZYL)AMINO]PHENYL}-6-ETHYLPYRIMIDINE-2,4-DIAMINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2G24 
_cell.length_a            140.885 
_cell.length_b            140.885 
_cell.length_c            140.885 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2G24 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA hexameric 6 software_defined_assembly 3 
PISA trimeric 3 software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D 1 1 
B,E 2 1 
A,B,C,D,E 3 1,2,3 
B,E 4 1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_656 -z+1,x+1/2,-y+3/2 0 0 -1 1 0 0 0 -1 0 140.885 70.4425 211.3275 
3 'crystal symmetry operation' 11_466 y-1/2,-z+3/2,-x+1 0 1 0 0 0 -1 -1 0 0 -70.4425 211.3275 140.885 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 44 A CYS 46 1_555 A SG CYS 51 A CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 210 A CYS 210 1_555 A SG CYS 214 A CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 252 A CYS 252 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf4 B SG CYS 44 B CYS 46 1_555 B SG CYS 51 B CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf5 B SG CYS 210 B CYS 210 1_555 B SG CYS 214 B CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf6 B SG CYS 252 B CYS 252 1_555 B SG CYS 289 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
#
_chem_comp.formula           'C19 H19 F2 N5' 
_chem_comp.formula_weight    355.384 
_chem_comp.id                7IG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-{4-[(3,5-DIFLUOROBENZYL)AMINO]PHENYL}-6-ETHYLPYRIMIDINE-2,4-DIAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N1 7IG doub 1 n y 
C1 C4 7IG sing 2 n y 
C1 N3 7IG sing 3 n n 
N1 C2 7IG sing 4 n y 
C2 N2 7IG doub 5 n y 
C2 N4 7IG sing 6 n n 
N2 C3 7IG sing 7 n y 
C3 C4 7IG doub 8 n y 
C3 C5 7IG sing 9 n n 
C4 C9 7IG sing 10 n y 
N3 HN31 7IG sing 11 n n 
N3 HN32 7IG sing 12 n n 
N4 HN41 7IG sing 13 n n 
N4 HN42 7IG sing 14 n n 
C5 C6 7IG sing 15 n n 
C5 H51 7IG sing 16 n n 
C5 H52 7IG sing 17 n n 
C6 H61 7IG sing 18 n n 
C6 H62 7IG sing 19 n n 
C6 H63 7IG sing 20 n n 
C7 C8 7IG sing 21 n y 
C7 C12 7IG doub 22 n y 
C7 H7 7IG sing 23 n n 
C8 C9 7IG doub 24 n y 
C8 H8 7IG sing 25 n n 
C9 C10 7IG sing 26 n y 
C10 C11 7IG doub 27 n y 
C10 H10 7IG sing 28 n n 
C11 C12 7IG sing 29 n y 
C11 H11 7IG sing 30 n n 
C12 N5 7IG sing 31 n n 
N5 C19 7IG sing 32 n n 
N5 HN5 7IG sing 33 n n 
C13 C14 7IG sing 34 n y 
C13 C18 7IG doub 35 n y 
C13 F1 7IG sing 36 n n 
C14 C15 7IG doub 37 n y 
C14 H14 7IG sing 38 n n 
C15 C16 7IG sing 39 n y 
C15 C19 7IG sing 40 n n 
C16 C17 7IG doub 41 n y 
C16 H16 7IG sing 42 n n 
C17 C18 7IG sing 43 n y 
C17 F2 7IG sing 44 n n 
C18 H18 7IG sing 45 n n 
C19 H191 7IG sing 46 n n 
C19 H192 7IG sing 47 n n 
#
_atom_sites.entry_id                     2G24 
_atom_sites.fract_transf_matrix[1][1]    0.007098 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007098 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007098 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 7IG A 1 334 18 7IG 7IG . 
D 3 HOH A 1 335 1 HOH TIP . 
D 3 HOH A 2 336 3 HOH TIP . 
D 3 HOH A 3 337 4 HOH TIP . 
D 3 HOH A 4 338 5 HOH TIP . 
D 3 HOH A 5 339 6 HOH TIP . 
D 3 HOH A 6 340 7 HOH TIP . 
D 3 HOH A 7 341 10 HOH TIP . 
D 3 HOH A 8 342 11 HOH TIP . 
D 3 HOH A 9 343 12 HOH TIP . 
D 3 HOH A 10 344 15 HOH TIP . 
D 3 HOH A 11 345 16 HOH TIP . 
D 3 HOH A 12 346 17 HOH TIP . 
D 3 HOH A 13 347 18 HOH TIP . 
D 3 HOH A 14 348 19 HOH TIP . 
D 3 HOH A 15 349 20 HOH TIP . 
D 3 HOH A 16 350 21 HOH TIP . 
D 3 HOH A 17 351 23 HOH TIP . 
D 3 HOH A 18 352 24 HOH TIP . 
D 3 HOH A 19 353 25 HOH TIP . 
D 3 HOH A 20 354 26 HOH TIP . 
D 3 HOH A 21 355 27 HOH TIP . 
D 3 HOH A 22 356 28 HOH TIP . 
D 3 HOH A 23 357 30 HOH TIP . 
D 3 HOH A 24 358 31 HOH TIP . 
D 3 HOH A 25 359 33 HOH TIP . 
D 3 HOH A 26 360 34 HOH TIP . 
D 3 HOH A 27 361 35 HOH TIP . 
D 3 HOH A 28 362 36 HOH TIP . 
D 3 HOH A 29 363 38 HOH TIP . 
D 3 HOH A 30 364 40 HOH TIP . 
D 3 HOH A 31 365 41 HOH TIP . 
D 3 HOH A 32 366 44 HOH TIP . 
D 3 HOH A 33 367 47 HOH TIP . 
D 3 HOH A 34 368 50 HOH TIP . 
D 3 HOH A 35 369 52 HOH TIP . 
D 3 HOH A 36 370 53 HOH TIP . 
D 3 HOH A 37 371 54 HOH TIP . 
D 3 HOH A 38 372 55 HOH TIP . 
D 3 HOH A 39 373 56 HOH TIP . 
D 3 HOH A 40 374 57 HOH TIP . 
D 3 HOH A 41 375 58 HOH TIP . 
D 3 HOH A 42 376 59 HOH TIP . 
D 3 HOH A 43 377 60 HOH TIP . 
D 3 HOH A 44 378 61 HOH TIP . 
D 3 HOH A 45 379 62 HOH TIP . 
D 3 HOH A 46 380 64 HOH TIP . 
D 3 HOH A 47 381 66 HOH TIP . 
D 3 HOH A 48 382 67 HOH TIP . 
D 3 HOH A 49 383 68 HOH TIP . 
D 3 HOH A 50 384 70 HOH TIP . 
D 3 HOH A 51 385 71 HOH TIP . 
D 3 HOH A 52 386 72 HOH TIP . 
D 3 HOH A 53 387 75 HOH TIP . 
D 3 HOH A 54 388 76 HOH TIP . 
D 3 HOH A 55 389 77 HOH TIP . 
D 3 HOH A 56 390 80 HOH TIP . 
D 3 HOH A 57 391 81 HOH TIP . 
D 3 HOH A 58 392 85 HOH TIP . 
D 3 HOH A 59 393 86 HOH TIP . 
D 3 HOH A 60 394 87 HOH TIP . 
D 3 HOH A 61 395 88 HOH TIP . 
D 3 HOH A 62 396 89 HOH TIP . 
D 3 HOH A 63 397 90 HOH TIP . 
D 3 HOH A 64 398 91 HOH TIP . 
D 3 HOH A 65 399 94 HOH TIP . 
D 3 HOH A 66 400 95 HOH TIP . 
D 3 HOH A 67 401 98 HOH TIP . 
D 3 HOH A 68 402 99 HOH TIP . 
D 3 HOH A 69 403 101 HOH TIP . 
D 3 HOH A 70 404 103 HOH TIP . 
D 3 HOH A 71 405 106 HOH TIP . 
D 3 HOH A 72 406 107 HOH TIP . 
D 3 HOH A 73 407 108 HOH TIP . 
D 3 HOH A 74 408 109 HOH TIP . 
D 3 HOH A 75 409 110 HOH TIP . 
E 3 HOH B 1 334 2 HOH TIP . 
E 3 HOH B 2 335 8 HOH TIP . 
E 3 HOH B 3 336 9 HOH TIP . 
E 3 HOH B 4 337 13 HOH TIP . 
E 3 HOH B 5 338 14 HOH TIP . 
E 3 HOH B 6 339 22 HOH TIP . 
E 3 HOH B 7 340 29 HOH TIP . 
E 3 HOH B 8 341 32 HOH TIP . 
E 3 HOH B 9 342 37 HOH TIP . 
E 3 HOH B 10 343 39 HOH TIP . 
E 3 HOH B 11 344 42 HOH TIP . 
E 3 HOH B 12 345 43 HOH TIP . 
E 3 HOH B 13 346 45 HOH TIP . 
E 3 HOH B 14 347 46 HOH TIP . 
E 3 HOH B 15 348 48 HOH TIP . 
E 3 HOH B 16 349 49 HOH TIP . 
E 3 HOH B 17 350 51 HOH TIP . 
E 3 HOH B 18 351 63 HOH TIP . 
E 3 HOH B 19 352 65 HOH TIP . 
E 3 HOH B 20 353 69 HOH TIP . 
E 3 HOH B 21 354 73 HOH TIP . 
E 3 HOH B 22 355 74 HOH TIP . 
E 3 HOH B 23 356 78 HOH TIP . 
E 3 HOH B 24 357 79 HOH TIP . 
E 3 HOH B 25 358 82 HOH TIP . 
E 3 HOH B 26 359 83 HOH TIP . 
E 3 HOH B 27 360 84 HOH TIP . 
E 3 HOH B 28 361 92 HOH TIP . 
E 3 HOH B 29 362 93 HOH TIP . 
E 3 HOH B 30 363 96 HOH TIP . 
E 3 HOH B 31 364 97 HOH TIP . 
E 3 HOH B 32 365 100 HOH TIP . 
E 3 HOH B 33 366 102 HOH TIP . 
E 3 HOH B 34 367 104 HOH TIP . 
E 3 HOH B 35 368 105 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 7IG . . . C 2 27.626 106.063 130.213 1 33.85 ? C1 7IG 334 A 1 
HETATM 2 N N1 7IG . . . C 2 28.167 106.639 131.325 1 33.25 ? N1 7IG 334 A 1 
HETATM 3 C C2 7IG . . . C 2 27.869 107.935 131.521 1 34.32 ? C2 7IG 334 A 1 
HETATM 4 N N2 7IG . . . C 2 27.1 108.655 130.704 1 33.82 ? N2 7IG 334 A 1 
HETATM 5 C C3 7IG . . . C 2 26.552 108.1 129.593 1 32.55 ? C3 7IG 334 A 1 
HETATM 6 C C4 7IG . . . C 2 26.784 106.744 129.282 1 32.78 ? C4 7IG 334 A 1 
HETATM 7 N N3 7IG . . . C 2 27.941 104.751 130.034 1 32.02 ? N3 7IG 334 A 1 
HETATM 8 N N4 7IG . . . C 2 28.356 108.567 132.589 1 31.02 ? N4 7IG 334 A 1 
HETATM 9 C C5 7IG . . . C 2 25.71 109.069 128.8 1 33.58 ? C5 7IG 334 A 1 
HETATM 10 C C6 7IG . . . C 2 24.237 109.079 129.214 1 32.01 ? C6 7IG 334 A 1 
HETATM 11 C C7 7IG . . . C 2 24.259 104.461 127.656 1 34.44 ? C7 7IG 334 A 1 
HETATM 12 C C8 7IG . . . C 2 24.992 105.228 128.56 1 32.65 ? C8 7IG 334 A 1 
HETATM 13 C C9 7IG . . . C 2 26.12 105.974 128.174 1 32.6 ? C9 7IG 334 A 1 
HETATM 14 C C10 7IG . . . C 2 26.506 105.933 126.808 1 31.75 ? C10 7IG 334 A 1 
HETATM 15 C C11 7IG . . . C 2 25.758 105.148 125.87 1 32.19 ? C11 7IG 334 A 1 
HETATM 16 C C12 7IG . . . C 2 24.621 104.397 126.283 1 33.82 ? C12 7IG 334 A 1 
HETATM 17 N N5 7IG . . . C 2 23.915 103.631 125.364 1 36.37 ? N5 7IG 334 A 1 
HETATM 18 C C13 7IG . . . C 2 24.538 99.731 127.201 1 43.93 ? C13 7IG 334 A 1 
HETATM 19 C C14 7IG . . . C 2 24.281 101.034 126.74 1 42.91 ? C14 7IG 334 A 1 
HETATM 20 C C15 7IG . . . C 2 23.016 101.371 126.156 1 42.14 ? C15 7IG 334 A 1 
HETATM 21 C C16 7IG . . . C 2 22.035 100.355 126.06 1 42.93 ? C16 7IG 334 A 1 
HETATM 22 C C17 7IG . . . C 2 22.319 99.052 126.532 1 45.87 ? C17 7IG 334 A 1 
HETATM 23 C C18 7IG . . . C 2 23.568 98.71 127.109 1 44.78 ? C18 7IG 334 A 1 
HETATM 24 F F1 7IG . . . C 2 25.748 99.47 127.742 1 40.03 ? F1 7IG 334 A 1 
HETATM 25 C C19 7IG . . . C 2 22.718 102.784 125.646 1 39.87 ? C19 7IG 334 A 1 
HETATM 26 F F2 7IG . . . C 2 21.376 98.112 126.427 1 49.43 ? F2 7IG 334 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           26 
#