data_2G26 # _model_server_result.job_id gqBoTCHDJS5oPRqlobA-jQ _model_server_result.datetime_utc '2025-02-05 06:48:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g26 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":805}' # _entry.id 2G26 # _exptl.entry_id 2G26 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 573.636 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(5-{[(2R)-1-(4-{3-[(2-METHOXYBENZYL)OXY]PROPOXY}PHENYL)-6-OXOPIPERAZIN-2-YL]METHOXY}-1H-INDOL-1-YL)ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G26 _cell.length_a 141.747 _cell.length_b 141.747 _cell.length_c 141.747 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G26 _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA hexameric 6 software_defined_assembly 3 PISA trimeric 3 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D 1 1 B,C,E 2 1 A,B,C,D,E 3 1,2,3 B,C,E 4 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_456 z-1/2,-x+1/2,-y+1 0 0 1 -1 0 0 0 -1 0 -70.8735 70.8735 141.747 3 'crystal symmetry operation' 12_565 -y+1/2,-z+1,x+1/2 0 -1 0 0 0 -1 1 0 0 70.8735 141.747 70.8735 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 46 1_555 A SG CYS 51 A CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf2 A SG CYS 210 A CYS 210 1_555 A SG CYS 214 A CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 252 A CYS 252 1_555 A SG CYS 289 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 B SG CYS 44 B CYS 46 1_555 B SG CYS 51 B CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 210 B CYS 210 1_555 B SG CYS 214 B CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 B SG CYS 252 B CYS 252 1_555 B SG CYS 289 B CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C32 H35 N3 O7' _chem_comp.formula_weight 573.636 _chem_comp.id 3LG _chem_comp.mon_nstd_flag . _chem_comp.name '(5-{[(2R)-1-(4-{3-[(2-METHOXYBENZYL)OXY]PROPOXY}PHENYL)-6-OXOPIPERAZIN-2-YL]METHOXY}-1H-INDOL-1-YL)ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 3LG sing 1 n n C1 H11A 3LG sing 2 n n C1 H12A 3LG sing 3 n n C1 H13A 3LG sing 4 n n O1 C2 3LG sing 5 n n C2 C3 3LG doub 6 n y C2 C5 3LG sing 7 n y C3 C4 3LG sing 8 n n C3 C8 3LG sing 9 n y C4 O2 3LG sing 10 n n C4 H41 3LG sing 11 n n C4 H42 3LG sing 12 n n O2 C33 3LG sing 13 n n C5 C6 3LG doub 14 n y C5 H5 3LG sing 15 n n C6 C7 3LG sing 16 n y C6 H6 3LG sing 17 n n C7 C8 3LG doub 18 n y C7 H7 3LG sing 19 n n C8 H8 3LG sing 20 n n C20 C21 3LG sing 21 n n C20 N3 3LG sing 22 n n C20 C24 3LG sing 23 n n C20 H20 3LG sing 24 n n C21 N2 3LG sing 25 n n C21 H211 3LG sing 26 n n C21 H212 3LG sing 27 n n N2 C22 3LG sing 28 n n N2 HN2 3LG sing 29 n n C22 C23 3LG sing 30 n n C22 H221 3LG sing 31 n n C22 H222 3LG sing 32 n n C23 N3 3LG sing 33 n n C23 O5 3LG doub 34 n n N3 C26 3LG sing 35 n n C24 O6 3LG sing 36 n n C24 H241 3LG sing 37 n n C24 H242 3LG sing 38 n n O6 C15 3LG sing 39 n n C25 C26 3LG sing 40 n y C25 C30 3LG doub 41 n y C25 H25 3LG sing 42 n n C26 C27 3LG doub 43 n y C27 C28 3LG sing 44 n y C27 H27 3LG sing 45 n n C28 C29 3LG doub 46 n y C28 H28 3LG sing 47 n n C29 C30 3LG sing 48 n y C29 O7 3LG sing 49 n n C30 H30 3LG sing 50 n n O7 C31 3LG sing 51 n n C31 C32 3LG sing 52 n n C31 H311 3LG sing 53 n n C31 H312 3LG sing 54 n n C32 C33 3LG sing 55 n n C32 H321 3LG sing 56 n n C32 H322 3LG sing 57 n n C33 H331 3LG sing 58 n n C33 H332 3LG sing 59 n n N1 C9 3LG sing 60 n y N1 C12 3LG sing 61 n y N1 C17 3LG sing 62 n n C9 C10 3LG sing 63 n y C9 C13 3LG doub 64 n y C10 C11 3LG sing 65 n y C10 C16 3LG doub 66 n y C11 C12 3LG doub 67 n y C11 H11 3LG sing 68 n n C12 H12 3LG sing 69 n n C13 C14 3LG sing 70 n y C13 H13 3LG sing 71 n n C14 C15 3LG doub 72 n y C14 H14 3LG sing 73 n n C15 C16 3LG sing 74 n y C16 H16 3LG sing 75 n n C17 C18 3LG sing 76 n n C17 H171 3LG sing 77 n n C17 H172 3LG sing 78 n n C18 O3 3LG doub 79 n n C18 O4 3LG sing 80 n n O4 HO4 3LG sing 81 n n # _atom_sites.entry_id 2G26 _atom_sites.fract_transf_matrix[1][1] 0.007046 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007046 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3LG B 1 805 805 3LG 3LG . D 3 HOH A 1 334 2 HOH TIP . D 3 HOH A 2 335 3 HOH TIP . D 3 HOH A 3 336 4 HOH TIP . D 3 HOH A 4 337 5 HOH TIP . D 3 HOH A 5 338 6 HOH TIP . D 3 HOH A 6 339 7 HOH TIP . D 3 HOH A 7 340 8 HOH TIP . D 3 HOH A 8 341 9 HOH TIP . D 3 HOH A 9 342 10 HOH TIP . D 3 HOH A 10 343 12 HOH TIP . D 3 HOH A 11 344 15 HOH TIP . D 3 HOH A 12 345 16 HOH TIP . D 3 HOH A 13 346 20 HOH TIP . D 3 HOH A 14 347 26 HOH TIP . D 3 HOH A 15 348 29 HOH TIP . D 3 HOH A 16 349 30 HOH TIP . D 3 HOH A 17 350 31 HOH TIP . D 3 HOH A 18 351 33 HOH TIP . D 3 HOH A 19 352 37 HOH TIP . D 3 HOH A 20 353 38 HOH TIP . D 3 HOH A 21 354 39 HOH TIP . D 3 HOH A 22 355 41 HOH TIP . D 3 HOH A 23 356 42 HOH TIP . D 3 HOH A 24 357 43 HOH TIP . D 3 HOH A 25 358 44 HOH TIP . D 3 HOH A 26 359 45 HOH TIP . D 3 HOH A 27 360 46 HOH TIP . D 3 HOH A 28 361 47 HOH TIP . D 3 HOH A 29 362 50 HOH TIP . D 3 HOH A 30 363 53 HOH TIP . D 3 HOH A 31 364 56 HOH TIP . D 3 HOH A 32 365 57 HOH TIP . D 3 HOH A 33 366 59 HOH TIP . D 3 HOH A 34 367 60 HOH TIP . D 3 HOH A 35 368 61 HOH TIP . D 3 HOH A 36 369 62 HOH TIP . D 3 HOH A 37 370 64 HOH TIP . D 3 HOH A 38 371 68 HOH TIP . D 3 HOH A 39 372 69 HOH TIP . D 3 HOH A 40 373 70 HOH TIP . D 3 HOH A 41 374 71 HOH TIP . D 3 HOH A 42 375 74 HOH TIP . D 3 HOH A 43 376 76 HOH TIP . D 3 HOH A 44 377 78 HOH TIP . D 3 HOH A 45 378 80 HOH TIP . D 3 HOH A 46 379 81 HOH TIP . D 3 HOH A 47 380 82 HOH TIP . D 3 HOH A 48 381 83 HOH TIP . D 3 HOH A 49 382 85 HOH TIP . D 3 HOH A 50 383 86 HOH TIP . D 3 HOH A 51 384 87 HOH TIP . D 3 HOH A 52 385 88 HOH TIP . D 3 HOH A 53 386 91 HOH TIP . D 3 HOH A 54 387 94 HOH TIP . D 3 HOH A 55 388 100 HOH TIP . D 3 HOH A 56 389 101 HOH TIP . D 3 HOH A 57 390 104 HOH TIP . D 3 HOH A 58 391 105 HOH TIP . D 3 HOH A 59 392 106 HOH TIP . D 3 HOH A 60 393 107 HOH TIP . D 3 HOH A 61 394 109 HOH TIP . D 3 HOH A 62 395 112 HOH TIP . D 3 HOH A 63 396 113 HOH TIP . D 3 HOH A 64 397 115 HOH TIP . D 3 HOH A 65 398 116 HOH TIP . E 3 HOH B 1 806 1 HOH TIP . E 3 HOH B 2 807 11 HOH TIP . E 3 HOH B 3 808 13 HOH TIP . E 3 HOH B 4 809 14 HOH TIP . E 3 HOH B 5 810 17 HOH TIP . E 3 HOH B 6 811 18 HOH TIP . E 3 HOH B 7 812 19 HOH TIP . E 3 HOH B 8 813 21 HOH TIP . E 3 HOH B 9 814 22 HOH TIP . E 3 HOH B 10 815 23 HOH TIP . E 3 HOH B 11 816 24 HOH TIP . E 3 HOH B 12 817 25 HOH TIP . E 3 HOH B 13 818 27 HOH TIP . E 3 HOH B 14 819 28 HOH TIP . E 3 HOH B 15 820 32 HOH TIP . E 3 HOH B 16 821 34 HOH TIP . E 3 HOH B 17 822 35 HOH TIP . E 3 HOH B 18 823 36 HOH TIP . E 3 HOH B 19 824 40 HOH TIP . E 3 HOH B 20 825 48 HOH TIP . E 3 HOH B 21 826 49 HOH TIP . E 3 HOH B 22 827 51 HOH TIP . E 3 HOH B 23 828 52 HOH TIP . E 3 HOH B 24 829 54 HOH TIP . E 3 HOH B 25 830 55 HOH TIP . E 3 HOH B 26 831 58 HOH TIP . E 3 HOH B 27 832 63 HOH TIP . E 3 HOH B 28 833 65 HOH TIP . E 3 HOH B 29 834 66 HOH TIP . E 3 HOH B 30 835 67 HOH TIP . E 3 HOH B 31 836 72 HOH TIP . E 3 HOH B 32 837 73 HOH TIP . E 3 HOH B 33 838 75 HOH TIP . E 3 HOH B 34 839 77 HOH TIP . E 3 HOH B 35 840 79 HOH TIP . E 3 HOH B 36 841 84 HOH TIP . E 3 HOH B 37 842 89 HOH TIP . E 3 HOH B 38 843 90 HOH TIP . E 3 HOH B 39 844 92 HOH TIP . E 3 HOH B 40 845 93 HOH TIP . E 3 HOH B 41 846 95 HOH TIP . E 3 HOH B 42 847 96 HOH TIP . E 3 HOH B 43 848 97 HOH TIP . E 3 HOH B 44 849 98 HOH TIP . E 3 HOH B 45 850 99 HOH TIP . E 3 HOH B 46 851 102 HOH TIP . E 3 HOH B 47 852 103 HOH TIP . E 3 HOH B 48 853 108 HOH TIP . E 3 HOH B 49 854 110 HOH TIP . E 3 HOH B 50 855 111 HOH TIP . E 3 HOH B 51 856 114 HOH TIP . E 3 HOH B 52 857 117 HOH TIP . E 3 HOH B 53 858 118 HOH TIP . E 3 HOH B 54 859 119 HOH TIP . E 3 HOH B 55 860 120 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3LG . . . C 2 18.353 43.971 127.531 1 56.39 ? C1 3LG 805 B 1 HETATM 2 O O1 3LG . . . C 2 18.724 44.673 128.708 1 54.61 ? O1 3LG 805 B 1 HETATM 3 C C2 3LG . . . C 2 19.076 46.03 128.523 1 55.13 ? C2 3LG 805 B 1 HETATM 4 C C3 3LG . . . C 2 18.66 47 129.479 1 54.39 ? C3 3LG 805 B 1 HETATM 5 C C4 3LG . . . C 2 17.84 46.519 130.652 1 52.2 ? C4 3LG 805 B 1 HETATM 6 O O2 3LG . . . C 2 18.445 46.568 131.921 1 49.51 ? O2 3LG 805 B 1 HETATM 7 C C5 3LG . . . C 2 19.85 46.424 127.391 1 54.47 ? C5 3LG 805 B 1 HETATM 8 C C6 3LG . . . C 2 20.208 47.775 127.208 1 55.88 ? C6 3LG 805 B 1 HETATM 9 C C7 3LG . . . C 2 19.801 48.742 128.153 1 54.12 ? C7 3LG 805 B 1 HETATM 10 C C8 3LG . . . C 2 19.031 48.36 129.284 1 55.48 ? C8 3LG 805 B 1 HETATM 11 C C20 3LG . . . C 2 16.928 37.45 127.931 1 39.15 ? C20 3LG 805 B 1 HETATM 12 C C21 3LG . . . C 2 16.581 36.01 127.463 1 37 ? C21 3LG 805 B 1 HETATM 13 N N2 3LG . . . C 2 16.064 35.204 128.555 1 37.83 ? N2 3LG 805 B 1 HETATM 14 C C22 3LG . . . C 2 16.818 35.119 129.798 1 37.02 ? C22 3LG 805 B 1 HETATM 15 C C23 3LG . . . C 2 17.196 36.519 130.334 1 37.03 ? C23 3LG 805 B 1 HETATM 16 N N3 3LG . . . C 2 17.235 37.582 129.432 1 36.52 ? N3 3LG 805 B 1 HETATM 17 O O5 3LG . . . C 2 17.44 36.631 131.535 1 37.23 ? O5 3LG 805 B 1 HETATM 18 C C24 3LG . . . C 2 18.062 37.942 126.929 1 41.48 ? C24 3LG 805 B 1 HETATM 19 O O6 3LG . . . C 2 18.769 39.155 126.988 1 48.61 ? O6 3LG 805 B 1 HETATM 20 C C25 3LG . . . C 2 18.94 39.232 130.066 1 38.87 ? C25 3LG 805 B 1 HETATM 21 C C26 3LG . . . C 2 17.574 38.82 129.974 1 38.37 ? C26 3LG 805 B 1 HETATM 22 C C27 3LG . . . C 2 16.559 39.7 130.448 1 38.56 ? C27 3LG 805 B 1 HETATM 23 C C28 3LG . . . C 2 16.907 40.963 130.993 1 40.91 ? C28 3LG 805 B 1 HETATM 24 C C29 3LG . . . C 2 18.279 41.365 131.073 1 42.74 ? C29 3LG 805 B 1 HETATM 25 C C30 3LG . . . C 2 19.282 40.487 130.606 1 40.53 ? C30 3LG 805 B 1 HETATM 26 O O7 3LG . . . C 2 18.687 42.599 131.584 1 43.48 ? O7 3LG 805 B 1 HETATM 27 C C31 3LG . . . C 2 18.443 42.886 132.949 1 46.71 ? C31 3LG 805 B 1 HETATM 28 C C32 3LG . . . C 2 18.09 44.379 133.087 1 47.88 ? C32 3LG 805 B 1 HETATM 29 C C33 3LG . . . C 2 19.041 45.334 132.315 1 48.94 ? C33 3LG 805 B 1 HETATM 30 N N1 3LG . . . C 2 21.655 41.557 122.811 1 53.64 ? N1 3LG 805 B 1 HETATM 31 C C9 3LG . . . C 2 20.898 40.711 123.642 1 52.72 ? C9 3LG 805 B 1 HETATM 32 C C10 3LG . . . C 2 20.751 41.407 124.897 1 52.5 ? C10 3LG 805 B 1 HETATM 33 C C11 3LG . . . C 2 21.442 42.656 124.775 1 52.57 ? C11 3LG 805 B 1 HETATM 34 C C12 3LG . . . C 2 21.968 42.689 123.491 1 53.8 ? C12 3LG 805 B 1 HETATM 35 C C13 3LG . . . C 2 20.294 39.444 123.519 1 53.14 ? C13 3LG 805 B 1 HETATM 36 C C14 3LG . . . C 2 19.572 38.866 124.6 1 52.7 ? C14 3LG 805 B 1 HETATM 37 C C15 3LG . . . C 2 19.443 39.583 125.841 1 49.97 ? C15 3LG 805 B 1 HETATM 38 C C16 3LG . . . C 2 20.051 40.854 125.954 1 51.2 ? C16 3LG 805 B 1 HETATM 39 C C17 3LG . . . C 2 22.098 41.328 121.405 1 55.23 ? C17 3LG 805 B 1 HETATM 40 C C18 3LG . . . C 2 23.267 40.373 121.108 1 56.23 ? C18 3LG 805 B 1 HETATM 41 O O3 3LG . . . C 2 23.289 40.031 119.799 1 57.33 ? O3 3LG 805 B 1 HETATM 42 O O4 3LG . . . C 2 24.048 39.971 121.906 1 56.77 ? O4 3LG 805 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 42 #