data_2G28 # _model_server_result.job_id pXcS5ABQ9Kpl1COiadS5hA _model_server_result.datetime_utc '2024-10-18 23:35:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":887}' # _entry.id 2G28 # _exptl.entry_id 2G28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 563.373 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.61 _cell.angle_gamma 90 _cell.entry_id 2G28 _cell.length_a 81.99 _cell.length_b 143.2 _cell.length_c 82.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 230 A ASP 230 1_555 E MG MG . B MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc2 A OD1 ASN 260 A ASN 260 1_555 E MG MG . B MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc3 A O GLN 262 A GLN 262 1_555 E MG MG . B MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc4 D O1A TDK . A TDK 887 1_555 C MG MG . A MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc5 D O1B TDK . A TDK 887 1_555 C MG MG . A MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc6 C MG MG . A MG 888 1_555 G O HOH . A HOH 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc7 C MG MG . A MG 888 1_555 B OD1 ASP 230 B ASP 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc8 C MG MG . A MG 888 1_555 B OD1 ASN 260 B ASN 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc9 C MG MG . A MG 888 1_555 B O GLN 262 B GLN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc10 G O HOH . A HOH 890 1_555 E MG MG . B MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc11 F O1A TDK . B TDK 887 1_555 E MG MG . B MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc12 F O1B TDK . B TDK 887 1_555 E MG MG . B MG 888 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? # _chem_comp.formula 'C15 H26 N4 O11 P3 S 1' _chem_comp.formula_weight 563.373 _chem_comp.id TDK _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-PHOSPHONOLACTYLTHIAMIN DIPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2B PB TDK sing 290 n n O2B H2B TDK sing 291 n n PB O3B TDK sing 292 n n PB O1B TDK doub 293 n n PB O3A TDK sing 294 n n O3B H3B TDK sing 295 n n O3A PA TDK sing 296 n n PA O1A TDK doub 297 n n PA O2A TDK sing 298 n n PA O7 TDK sing 299 n n O2A H2A TDK sing 300 n n O7 C7 TDK sing 301 n n C7 C6 TDK sing 302 n n C7 H71 TDK sing 303 n n C7 H72 TDK sing 304 n n C6 C5 TDK sing 305 n n C6 H61 TDK sing 306 n n C6 H62 TDK sing 307 n n C5 S1 TDK sing 308 n y C5 C4 TDK doub 309 n y S1 C2 TDK sing 310 n y C4 CM4 TDK sing 311 n n C4 N3 TDK sing 312 n y CM4 HM41 TDK sing 313 n n CM4 HM42 TDK sing 314 n n CM4 HM43 TDK sing 315 n n N3 C2 TDK doub 316 n y N3 C7' TDK sing 317 n n C2 CMA TDK sing 318 n n CMA OM1 TDK sing 319 n n CMA CMB TDK sing 320 n n CMA PC TDK sing 321 n n OM1 HM1 TDK sing 322 n n CMB HMB1 TDK sing 323 n n CMB HMB2 TDK sing 324 n n CMB HMB3 TDK sing 325 n n PC OM3 TDK sing 326 n n PC OM2 TDK sing 327 n n PC OM4 TDK doub 328 n n OM3 HM3 TDK sing 329 n n OM2 CMC TDK sing 330 n n CMC HMC1 TDK sing 331 n n CMC HMC2 TDK sing 332 n n CMC HMC3 TDK sing 333 n n C7' C5' TDK sing 334 n n C7' "H7'1" TDK sing 335 n n C7' "H7'2" TDK sing 336 n n C5' C6' TDK doub 337 n y C5' C4' TDK sing 338 n y C6' N1' TDK sing 339 n y C6' H6' TDK sing 340 n n N1' C2' TDK doub 341 n y C2' CM2 TDK sing 342 n n C2' N3' TDK sing 343 n y CM2 HM21 TDK sing 344 n n CM2 HM22 TDK sing 345 n n CM2 HM23 TDK sing 346 n n N3' C4' TDK doub 347 n y C4' N4' TDK sing 348 n n N4' "H4'1" TDK sing 349 n n N4' "H4'2" TDK sing 350 n n # _atom_sites.entry_id 2G28 _atom_sites.fract_transf_matrix[1][1] 0.012197 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002729 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012416 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 888 888 MG MG . D 3 TDK A 1 887 887 TDK TDK . E 2 MG B 1 888 888 MG MG . F 3 TDK B 1 887 887 TDK TDK . G 4 HOH A 1 889 2 HOH HOH . G 4 HOH A 2 890 3 HOH HOH . G 4 HOH A 3 891 14 HOH HOH . G 4 HOH A 4 892 15 HOH HOH . G 4 HOH A 5 893 16 HOH HOH . G 4 HOH A 6 894 17 HOH HOH . G 4 HOH A 7 895 19 HOH HOH . G 4 HOH A 8 896 21 HOH HOH . G 4 HOH A 9 897 24 HOH HOH . G 4 HOH A 10 898 25 HOH HOH . G 4 HOH A 11 899 26 HOH HOH . G 4 HOH A 12 900 27 HOH HOH . G 4 HOH A 13 901 29 HOH HOH . G 4 HOH A 14 902 34 HOH HOH . G 4 HOH A 15 903 36 HOH HOH . G 4 HOH A 16 904 39 HOH HOH . G 4 HOH A 17 905 41 HOH HOH . G 4 HOH A 18 906 43 HOH HOH . G 4 HOH A 19 907 46 HOH HOH . G 4 HOH A 20 908 47 HOH HOH . G 4 HOH A 21 909 49 HOH HOH . G 4 HOH A 22 910 50 HOH HOH . G 4 HOH A 23 911 51 HOH HOH . G 4 HOH A 24 912 52 HOH HOH . G 4 HOH A 25 913 54 HOH HOH . G 4 HOH A 26 914 55 HOH HOH . G 4 HOH A 27 915 58 HOH HOH . G 4 HOH A 28 916 60 HOH HOH . G 4 HOH A 29 917 61 HOH HOH . G 4 HOH A 30 918 64 HOH HOH . G 4 HOH A 31 919 65 HOH HOH . G 4 HOH A 32 920 68 HOH HOH . G 4 HOH A 33 921 74 HOH HOH . G 4 HOH A 34 922 76 HOH HOH . G 4 HOH A 35 923 79 HOH HOH . G 4 HOH A 36 924 81 HOH HOH . G 4 HOH A 37 925 83 HOH HOH . G 4 HOH A 38 926 84 HOH HOH . G 4 HOH A 39 927 85 HOH HOH . G 4 HOH A 40 928 86 HOH HOH . G 4 HOH A 41 929 87 HOH HOH . G 4 HOH A 42 930 88 HOH HOH . G 4 HOH A 43 931 89 HOH HOH . G 4 HOH A 44 932 90 HOH HOH . G 4 HOH A 45 933 91 HOH HOH . G 4 HOH A 46 934 92 HOH HOH . G 4 HOH A 47 935 93 HOH HOH . G 4 HOH A 48 936 95 HOH HOH . G 4 HOH A 49 937 96 HOH HOH . G 4 HOH A 50 938 97 HOH HOH . G 4 HOH A 51 939 98 HOH HOH . G 4 HOH A 52 940 99 HOH HOH . G 4 HOH A 53 941 103 HOH HOH . G 4 HOH A 54 942 104 HOH HOH . G 4 HOH A 55 943 106 HOH HOH . G 4 HOH A 56 944 107 HOH HOH . G 4 HOH A 57 945 108 HOH HOH . G 4 HOH A 58 946 110 HOH HOH . G 4 HOH A 59 947 112 HOH HOH . G 4 HOH A 60 948 117 HOH HOH . G 4 HOH A 61 949 118 HOH HOH . G 4 HOH A 62 950 120 HOH HOH . G 4 HOH A 63 951 121 HOH HOH . G 4 HOH A 64 952 123 HOH HOH . G 4 HOH A 65 953 127 HOH HOH . G 4 HOH A 66 954 128 HOH HOH . G 4 HOH A 67 955 129 HOH HOH . G 4 HOH A 68 956 130 HOH HOH . G 4 HOH A 69 957 133 HOH HOH . G 4 HOH A 70 958 136 HOH HOH . G 4 HOH A 71 959 139 HOH HOH . G 4 HOH A 72 960 140 HOH HOH . G 4 HOH A 73 961 141 HOH HOH . G 4 HOH A 74 962 143 HOH HOH . G 4 HOH A 75 963 145 HOH HOH . G 4 HOH A 76 964 146 HOH HOH . G 4 HOH A 77 965 147 HOH HOH . G 4 HOH A 78 966 149 HOH HOH . G 4 HOH A 79 967 151 HOH HOH . G 4 HOH A 80 968 154 HOH HOH . G 4 HOH A 81 969 155 HOH HOH . G 4 HOH A 82 970 156 HOH HOH . G 4 HOH A 83 971 158 HOH HOH . G 4 HOH A 84 972 160 HOH HOH . G 4 HOH A 85 973 162 HOH HOH . G 4 HOH A 86 974 163 HOH HOH . G 4 HOH A 87 975 164 HOH HOH . G 4 HOH A 88 976 165 HOH HOH . G 4 HOH A 89 977 168 HOH HOH . G 4 HOH A 90 978 169 HOH HOH . G 4 HOH A 91 979 171 HOH HOH . G 4 HOH A 92 980 174 HOH HOH . G 4 HOH A 93 981 175 HOH HOH . G 4 HOH A 94 982 176 HOH HOH . G 4 HOH A 95 983 180 HOH HOH . G 4 HOH A 96 984 183 HOH HOH . G 4 HOH A 97 985 185 HOH HOH . G 4 HOH A 98 986 191 HOH HOH . G 4 HOH A 99 987 195 HOH HOH . G 4 HOH A 100 988 198 HOH HOH . G 4 HOH A 101 989 200 HOH HOH . G 4 HOH A 102 990 202 HOH HOH . G 4 HOH A 103 991 207 HOH HOH . G 4 HOH A 104 992 208 HOH HOH . G 4 HOH A 105 993 211 HOH HOH . G 4 HOH A 106 994 212 HOH HOH . G 4 HOH A 107 995 214 HOH HOH . G 4 HOH A 108 996 216 HOH HOH . G 4 HOH A 109 997 219 HOH HOH . G 4 HOH A 110 998 223 HOH HOH . G 4 HOH A 111 999 224 HOH HOH . G 4 HOH A 112 1000 226 HOH HOH . G 4 HOH A 113 1001 227 HOH HOH . G 4 HOH A 114 1002 229 HOH HOH . G 4 HOH A 115 1003 233 HOH HOH . G 4 HOH A 116 1004 234 HOH HOH . G 4 HOH A 117 1005 236 HOH HOH . G 4 HOH A 118 1006 237 HOH HOH . G 4 HOH A 119 1007 238 HOH HOH . G 4 HOH A 120 1008 240 HOH HOH . G 4 HOH A 121 1009 242 HOH HOH . G 4 HOH A 122 1010 243 HOH HOH . G 4 HOH A 123 1011 247 HOH HOH . G 4 HOH A 124 1012 249 HOH HOH . G 4 HOH A 125 1013 250 HOH HOH . G 4 HOH A 126 1014 251 HOH HOH . G 4 HOH A 127 1015 252 HOH HOH . G 4 HOH A 128 1016 255 HOH HOH . G 4 HOH A 129 1017 256 HOH HOH . G 4 HOH A 130 1018 257 HOH HOH . G 4 HOH A 131 1019 258 HOH HOH . G 4 HOH A 132 1020 259 HOH HOH . G 4 HOH A 133 1021 260 HOH HOH . G 4 HOH A 134 1022 262 HOH HOH . G 4 HOH A 135 1023 263 HOH HOH . G 4 HOH A 136 1024 264 HOH HOH . G 4 HOH A 137 1025 265 HOH HOH . G 4 HOH A 138 1026 266 HOH HOH . G 4 HOH A 139 1027 268 HOH HOH . G 4 HOH A 140 1028 271 HOH HOH . G 4 HOH A 141 1029 272 HOH HOH . G 4 HOH A 142 1030 273 HOH HOH . G 4 HOH A 143 1031 276 HOH HOH . G 4 HOH A 144 1032 278 HOH HOH . G 4 HOH A 145 1033 280 HOH HOH . G 4 HOH A 146 1034 282 HOH HOH . G 4 HOH A 147 1035 283 HOH HOH . G 4 HOH A 148 1036 284 HOH HOH . G 4 HOH A 149 1037 286 HOH HOH . G 4 HOH A 150 1038 287 HOH HOH . G 4 HOH A 151 1039 289 HOH HOH . G 4 HOH A 152 1040 295 HOH HOH . G 4 HOH A 153 1041 297 HOH HOH . G 4 HOH A 154 1042 298 HOH HOH . G 4 HOH A 155 1043 300 HOH HOH . G 4 HOH A 156 1044 302 HOH HOH . G 4 HOH A 157 1045 303 HOH HOH . G 4 HOH A 158 1046 304 HOH HOH . G 4 HOH A 159 1047 305 HOH HOH . G 4 HOH A 160 1048 306 HOH HOH . G 4 HOH A 161 1049 308 HOH HOH . G 4 HOH A 162 1050 309 HOH HOH . G 4 HOH A 163 1051 310 HOH HOH . G 4 HOH A 164 1052 311 HOH HOH . G 4 HOH A 165 1053 313 HOH HOH . G 4 HOH A 166 1054 314 HOH HOH . G 4 HOH A 167 1055 315 HOH HOH . G 4 HOH A 168 1056 319 HOH HOH . G 4 HOH A 169 1057 320 HOH HOH . G 4 HOH A 170 1058 323 HOH HOH . G 4 HOH A 171 1059 326 HOH HOH . G 4 HOH A 172 1060 327 HOH HOH . G 4 HOH A 173 1061 329 HOH HOH . G 4 HOH A 174 1062 330 HOH HOH . G 4 HOH A 175 1063 331 HOH HOH . G 4 HOH A 176 1064 332 HOH HOH . G 4 HOH A 177 1065 334 HOH HOH . G 4 HOH A 178 1066 335 HOH HOH . G 4 HOH A 179 1067 336 HOH HOH . G 4 HOH A 180 1068 338 HOH HOH . G 4 HOH A 181 1069 340 HOH HOH . G 4 HOH A 182 1070 346 HOH HOH . G 4 HOH A 183 1071 347 HOH HOH . G 4 HOH A 184 1072 351 HOH HOH . G 4 HOH A 185 1073 352 HOH HOH . G 4 HOH A 186 1074 357 HOH HOH . G 4 HOH A 187 1075 358 HOH HOH . G 4 HOH A 188 1076 359 HOH HOH . G 4 HOH A 189 1077 361 HOH HOH . G 4 HOH A 190 1078 364 HOH HOH . G 4 HOH A 191 1079 366 HOH HOH . G 4 HOH A 192 1080 368 HOH HOH . G 4 HOH A 193 1081 373 HOH HOH . G 4 HOH A 194 1082 375 HOH HOH . G 4 HOH A 195 1083 378 HOH HOH . G 4 HOH A 196 1084 385 HOH HOH . G 4 HOH A 197 1085 386 HOH HOH . G 4 HOH A 198 1086 390 HOH HOH . G 4 HOH A 199 1087 391 HOH HOH . G 4 HOH A 200 1088 392 HOH HOH . G 4 HOH A 201 1089 394 HOH HOH . G 4 HOH A 202 1090 395 HOH HOH . G 4 HOH A 203 1091 396 HOH HOH . G 4 HOH A 204 1092 397 HOH HOH . G 4 HOH A 205 1093 399 HOH HOH . G 4 HOH A 206 1094 400 HOH HOH . G 4 HOH A 207 1095 401 HOH HOH . G 4 HOH A 208 1096 402 HOH HOH . G 4 HOH A 209 1097 405 HOH HOH . G 4 HOH A 210 1098 406 HOH HOH . G 4 HOH A 211 1099 407 HOH HOH . G 4 HOH A 212 1100 409 HOH HOH . G 4 HOH A 213 1101 410 HOH HOH . G 4 HOH A 214 1102 411 HOH HOH . G 4 HOH A 215 1103 412 HOH HOH . G 4 HOH A 216 1104 414 HOH HOH . G 4 HOH A 217 1105 417 HOH HOH . G 4 HOH A 218 1106 419 HOH HOH . G 4 HOH A 219 1107 420 HOH HOH . G 4 HOH A 220 1108 425 HOH HOH . G 4 HOH A 221 1109 427 HOH HOH . G 4 HOH A 222 1110 434 HOH HOH . G 4 HOH A 223 1111 436 HOH HOH . G 4 HOH A 224 1112 438 HOH HOH . G 4 HOH A 225 1113 439 HOH HOH . G 4 HOH A 226 1114 440 HOH HOH . G 4 HOH A 227 1115 441 HOH HOH . G 4 HOH A 228 1116 443 HOH HOH . G 4 HOH A 229 1117 444 HOH HOH . G 4 HOH A 230 1118 445 HOH HOH . G 4 HOH A 231 1119 446 HOH HOH . G 4 HOH A 232 1120 449 HOH HOH . G 4 HOH A 233 1121 450 HOH HOH . G 4 HOH A 234 1122 458 HOH HOH . G 4 HOH A 235 1123 460 HOH HOH . G 4 HOH A 236 1124 465 HOH HOH . G 4 HOH A 237 1125 466 HOH HOH . G 4 HOH A 238 1126 467 HOH HOH . G 4 HOH A 239 1127 468 HOH HOH . G 4 HOH A 240 1128 469 HOH HOH . G 4 HOH A 241 1129 471 HOH HOH . G 4 HOH A 242 1130 472 HOH HOH . G 4 HOH A 243 1131 474 HOH HOH . G 4 HOH A 244 1132 475 HOH HOH . G 4 HOH A 245 1133 477 HOH HOH . G 4 HOH A 246 1134 478 HOH HOH . G 4 HOH A 247 1135 480 HOH HOH . G 4 HOH A 248 1136 483 HOH HOH . G 4 HOH A 249 1137 487 HOH HOH . G 4 HOH A 250 1138 490 HOH HOH . G 4 HOH A 251 1139 492 HOH HOH . G 4 HOH A 252 1140 494 HOH HOH . G 4 HOH A 253 1141 495 HOH HOH . G 4 HOH A 254 1142 496 HOH HOH . G 4 HOH A 255 1143 497 HOH HOH . G 4 HOH A 256 1144 498 HOH HOH . G 4 HOH A 257 1145 499 HOH HOH . G 4 HOH A 258 1146 501 HOH HOH . G 4 HOH A 259 1147 504 HOH HOH . G 4 HOH A 260 1148 506 HOH HOH . G 4 HOH A 261 1149 514 HOH HOH . G 4 HOH A 262 1150 515 HOH HOH . G 4 HOH A 263 1151 516 HOH HOH . G 4 HOH A 264 1152 518 HOH HOH . G 4 HOH A 265 1153 520 HOH HOH . G 4 HOH A 266 1154 521 HOH HOH . G 4 HOH A 267 1155 524 HOH HOH . G 4 HOH A 268 1156 528 HOH HOH . G 4 HOH A 269 1157 531 HOH HOH . G 4 HOH A 270 1158 532 HOH HOH . G 4 HOH A 271 1159 535 HOH HOH . G 4 HOH A 272 1160 536 HOH HOH . G 4 HOH A 273 1161 538 HOH HOH . G 4 HOH A 274 1162 541 HOH HOH . G 4 HOH A 275 1163 544 HOH HOH . G 4 HOH A 276 1164 546 HOH HOH . G 4 HOH A 277 1165 548 HOH HOH . G 4 HOH A 278 1166 550 HOH HOH . H 4 HOH B 1 889 1 HOH HOH . H 4 HOH B 2 890 4 HOH HOH . H 4 HOH B 3 891 5 HOH HOH . H 4 HOH B 4 892 6 HOH HOH . H 4 HOH B 5 893 7 HOH HOH . H 4 HOH B 6 894 8 HOH HOH . H 4 HOH B 7 895 9 HOH HOH . H 4 HOH B 8 896 10 HOH HOH . H 4 HOH B 9 897 11 HOH HOH . H 4 HOH B 10 898 12 HOH HOH . H 4 HOH B 11 899 13 HOH HOH . H 4 HOH B 12 900 18 HOH HOH . H 4 HOH B 13 901 20 HOH HOH . H 4 HOH B 14 902 22 HOH HOH . H 4 HOH B 15 903 23 HOH HOH . H 4 HOH B 16 904 28 HOH HOH . H 4 HOH B 17 905 30 HOH HOH . H 4 HOH B 18 906 31 HOH HOH . H 4 HOH B 19 907 32 HOH HOH . H 4 HOH B 20 908 33 HOH HOH . H 4 HOH B 21 909 35 HOH HOH . H 4 HOH B 22 910 37 HOH HOH . H 4 HOH B 23 911 38 HOH HOH . H 4 HOH B 24 912 40 HOH HOH . H 4 HOH B 25 913 42 HOH HOH . H 4 HOH B 26 914 44 HOH HOH . H 4 HOH B 27 915 45 HOH HOH . H 4 HOH B 28 916 48 HOH HOH . H 4 HOH B 29 917 53 HOH HOH . H 4 HOH B 30 918 56 HOH HOH . H 4 HOH B 31 919 57 HOH HOH . H 4 HOH B 32 920 59 HOH HOH . H 4 HOH B 33 921 62 HOH HOH . H 4 HOH B 34 922 63 HOH HOH . H 4 HOH B 35 923 66 HOH HOH . H 4 HOH B 36 924 67 HOH HOH . H 4 HOH B 37 925 69 HOH HOH . H 4 HOH B 38 926 70 HOH HOH . H 4 HOH B 39 927 71 HOH HOH . H 4 HOH B 40 928 72 HOH HOH . H 4 HOH B 41 929 73 HOH HOH . H 4 HOH B 42 930 75 HOH HOH . H 4 HOH B 43 931 77 HOH HOH . H 4 HOH B 44 932 78 HOH HOH . H 4 HOH B 45 933 80 HOH HOH . H 4 HOH B 46 934 82 HOH HOH . H 4 HOH B 47 935 94 HOH HOH . H 4 HOH B 48 936 100 HOH HOH . H 4 HOH B 49 937 101 HOH HOH . H 4 HOH B 50 938 102 HOH HOH . H 4 HOH B 51 939 105 HOH HOH . H 4 HOH B 52 940 109 HOH HOH . H 4 HOH B 53 941 111 HOH HOH . H 4 HOH B 54 942 113 HOH HOH . H 4 HOH B 55 943 114 HOH HOH . H 4 HOH B 56 944 115 HOH HOH . H 4 HOH B 57 945 116 HOH HOH . H 4 HOH B 58 946 119 HOH HOH . H 4 HOH B 59 947 122 HOH HOH . H 4 HOH B 60 948 124 HOH HOH . H 4 HOH B 61 949 125 HOH HOH . H 4 HOH B 62 950 126 HOH HOH . H 4 HOH B 63 951 131 HOH HOH . H 4 HOH B 64 952 132 HOH HOH . H 4 HOH B 65 953 134 HOH HOH . H 4 HOH B 66 954 135 HOH HOH . H 4 HOH B 67 955 137 HOH HOH . H 4 HOH B 68 956 138 HOH HOH . H 4 HOH B 69 957 142 HOH HOH . H 4 HOH B 70 958 144 HOH HOH . H 4 HOH B 71 959 148 HOH HOH . H 4 HOH B 72 960 150 HOH HOH . H 4 HOH B 73 961 152 HOH HOH . H 4 HOH B 74 962 153 HOH HOH . H 4 HOH B 75 963 157 HOH HOH . H 4 HOH B 76 964 159 HOH HOH . H 4 HOH B 77 965 161 HOH HOH . H 4 HOH B 78 966 166 HOH HOH . H 4 HOH B 79 967 167 HOH HOH . H 4 HOH B 80 968 170 HOH HOH . H 4 HOH B 81 969 172 HOH HOH . H 4 HOH B 82 970 173 HOH HOH . H 4 HOH B 83 971 177 HOH HOH . H 4 HOH B 84 972 178 HOH HOH . H 4 HOH B 85 973 179 HOH HOH . H 4 HOH B 86 974 181 HOH HOH . H 4 HOH B 87 975 182 HOH HOH . H 4 HOH B 88 976 184 HOH HOH . H 4 HOH B 89 977 186 HOH HOH . H 4 HOH B 90 978 187 HOH HOH . H 4 HOH B 91 979 188 HOH HOH . H 4 HOH B 92 980 189 HOH HOH . H 4 HOH B 93 981 190 HOH HOH . H 4 HOH B 94 982 192 HOH HOH . H 4 HOH B 95 983 193 HOH HOH . H 4 HOH B 96 984 194 HOH HOH . H 4 HOH B 97 985 196 HOH HOH . H 4 HOH B 98 986 197 HOH HOH . H 4 HOH B 99 987 199 HOH HOH . H 4 HOH B 100 988 201 HOH HOH . H 4 HOH B 101 989 203 HOH HOH . H 4 HOH B 102 990 204 HOH HOH . H 4 HOH B 103 991 205 HOH HOH . H 4 HOH B 104 992 206 HOH HOH . H 4 HOH B 105 993 209 HOH HOH . H 4 HOH B 106 994 210 HOH HOH . H 4 HOH B 107 995 213 HOH HOH . H 4 HOH B 108 996 215 HOH HOH . H 4 HOH B 109 997 217 HOH HOH . H 4 HOH B 110 998 218 HOH HOH . H 4 HOH B 111 999 220 HOH HOH . H 4 HOH B 112 1000 221 HOH HOH . H 4 HOH B 113 1001 222 HOH HOH . H 4 HOH B 114 1002 225 HOH HOH . H 4 HOH B 115 1003 228 HOH HOH . H 4 HOH B 116 1004 230 HOH HOH . H 4 HOH B 117 1005 231 HOH HOH . H 4 HOH B 118 1006 232 HOH HOH . H 4 HOH B 119 1007 235 HOH HOH . H 4 HOH B 120 1008 239 HOH HOH . H 4 HOH B 121 1009 241 HOH HOH . H 4 HOH B 122 1010 244 HOH HOH . H 4 HOH B 123 1011 245 HOH HOH . H 4 HOH B 124 1012 246 HOH HOH . H 4 HOH B 125 1013 248 HOH HOH . H 4 HOH B 126 1014 253 HOH HOH . H 4 HOH B 127 1015 254 HOH HOH . H 4 HOH B 128 1016 261 HOH HOH . H 4 HOH B 129 1017 267 HOH HOH . H 4 HOH B 130 1018 269 HOH HOH . H 4 HOH B 131 1019 270 HOH HOH . H 4 HOH B 132 1020 274 HOH HOH . H 4 HOH B 133 1021 275 HOH HOH . H 4 HOH B 134 1022 277 HOH HOH . H 4 HOH B 135 1023 279 HOH HOH . H 4 HOH B 136 1024 281 HOH HOH . H 4 HOH B 137 1025 285 HOH HOH . H 4 HOH B 138 1026 288 HOH HOH . H 4 HOH B 139 1027 290 HOH HOH . H 4 HOH B 140 1028 291 HOH HOH . H 4 HOH B 141 1029 292 HOH HOH . H 4 HOH B 142 1030 293 HOH HOH . H 4 HOH B 143 1031 294 HOH HOH . H 4 HOH B 144 1032 296 HOH HOH . H 4 HOH B 145 1033 299 HOH HOH . H 4 HOH B 146 1034 301 HOH HOH . H 4 HOH B 147 1035 307 HOH HOH . H 4 HOH B 148 1036 312 HOH HOH . H 4 HOH B 149 1037 316 HOH HOH . H 4 HOH B 150 1038 317 HOH HOH . H 4 HOH B 151 1039 318 HOH HOH . H 4 HOH B 152 1040 321 HOH HOH . H 4 HOH B 153 1041 322 HOH HOH . H 4 HOH B 154 1042 324 HOH HOH . H 4 HOH B 155 1043 325 HOH HOH . H 4 HOH B 156 1044 328 HOH HOH . H 4 HOH B 157 1045 333 HOH HOH . H 4 HOH B 158 1046 337 HOH HOH . H 4 HOH B 159 1047 339 HOH HOH . H 4 HOH B 160 1048 341 HOH HOH . H 4 HOH B 161 1049 342 HOH HOH . H 4 HOH B 162 1050 343 HOH HOH . H 4 HOH B 163 1051 344 HOH HOH . H 4 HOH B 164 1052 345 HOH HOH . H 4 HOH B 165 1053 348 HOH HOH . H 4 HOH B 166 1054 349 HOH HOH . H 4 HOH B 167 1055 350 HOH HOH . H 4 HOH B 168 1056 353 HOH HOH . H 4 HOH B 169 1057 354 HOH HOH . H 4 HOH B 170 1058 355 HOH HOH . H 4 HOH B 171 1059 356 HOH HOH . H 4 HOH B 172 1060 360 HOH HOH . H 4 HOH B 173 1061 362 HOH HOH . H 4 HOH B 174 1062 363 HOH HOH . H 4 HOH B 175 1063 365 HOH HOH . H 4 HOH B 176 1064 367 HOH HOH . H 4 HOH B 177 1065 369 HOH HOH . H 4 HOH B 178 1066 370 HOH HOH . H 4 HOH B 179 1067 371 HOH HOH . H 4 HOH B 180 1068 372 HOH HOH . H 4 HOH B 181 1069 374 HOH HOH . H 4 HOH B 182 1070 376 HOH HOH . H 4 HOH B 183 1071 377 HOH HOH . H 4 HOH B 184 1072 379 HOH HOH . H 4 HOH B 185 1073 380 HOH HOH . H 4 HOH B 186 1074 381 HOH HOH . H 4 HOH B 187 1075 382 HOH HOH . H 4 HOH B 188 1076 383 HOH HOH . H 4 HOH B 189 1077 384 HOH HOH . H 4 HOH B 190 1078 387 HOH HOH . H 4 HOH B 191 1079 388 HOH HOH . H 4 HOH B 192 1080 389 HOH HOH . H 4 HOH B 193 1081 393 HOH HOH . H 4 HOH B 194 1082 398 HOH HOH . H 4 HOH B 195 1083 403 HOH HOH . H 4 HOH B 196 1084 404 HOH HOH . H 4 HOH B 197 1085 408 HOH HOH . H 4 HOH B 198 1086 413 HOH HOH . H 4 HOH B 199 1087 415 HOH HOH . H 4 HOH B 200 1088 416 HOH HOH . H 4 HOH B 201 1089 418 HOH HOH . H 4 HOH B 202 1090 421 HOH HOH . H 4 HOH B 203 1091 422 HOH HOH . H 4 HOH B 204 1092 423 HOH HOH . H 4 HOH B 205 1093 424 HOH HOH . H 4 HOH B 206 1094 426 HOH HOH . H 4 HOH B 207 1095 428 HOH HOH . H 4 HOH B 208 1096 429 HOH HOH . H 4 HOH B 209 1097 430 HOH HOH . H 4 HOH B 210 1098 431 HOH HOH . H 4 HOH B 211 1099 432 HOH HOH . H 4 HOH B 212 1100 433 HOH HOH . H 4 HOH B 213 1101 435 HOH HOH . H 4 HOH B 214 1102 437 HOH HOH . H 4 HOH B 215 1103 442 HOH HOH . H 4 HOH B 216 1104 447 HOH HOH . H 4 HOH B 217 1105 448 HOH HOH . H 4 HOH B 218 1106 451 HOH HOH . H 4 HOH B 219 1107 452 HOH HOH . H 4 HOH B 220 1108 453 HOH HOH . H 4 HOH B 221 1109 454 HOH HOH . H 4 HOH B 222 1110 455 HOH HOH . H 4 HOH B 223 1111 456 HOH HOH . H 4 HOH B 224 1112 457 HOH HOH . H 4 HOH B 225 1113 459 HOH HOH . H 4 HOH B 226 1114 461 HOH HOH . H 4 HOH B 227 1115 462 HOH HOH . H 4 HOH B 228 1116 463 HOH HOH . H 4 HOH B 229 1117 464 HOH HOH . H 4 HOH B 230 1118 470 HOH HOH . H 4 HOH B 231 1119 473 HOH HOH . H 4 HOH B 232 1120 476 HOH HOH . H 4 HOH B 233 1121 479 HOH HOH . H 4 HOH B 234 1122 481 HOH HOH . H 4 HOH B 235 1123 482 HOH HOH . H 4 HOH B 236 1124 484 HOH HOH . H 4 HOH B 237 1125 485 HOH HOH . H 4 HOH B 238 1126 486 HOH HOH . H 4 HOH B 239 1127 488 HOH HOH . H 4 HOH B 240 1128 489 HOH HOH . H 4 HOH B 241 1129 491 HOH HOH . H 4 HOH B 242 1130 493 HOH HOH . H 4 HOH B 243 1131 500 HOH HOH . H 4 HOH B 244 1132 502 HOH HOH . H 4 HOH B 245 1133 503 HOH HOH . H 4 HOH B 246 1134 505 HOH HOH . H 4 HOH B 247 1135 507 HOH HOH . H 4 HOH B 248 1136 508 HOH HOH . H 4 HOH B 249 1137 509 HOH HOH . H 4 HOH B 250 1138 510 HOH HOH . H 4 HOH B 251 1139 511 HOH HOH . H 4 HOH B 252 1140 512 HOH HOH . H 4 HOH B 253 1141 513 HOH HOH . H 4 HOH B 254 1142 517 HOH HOH . H 4 HOH B 255 1143 519 HOH HOH . H 4 HOH B 256 1144 523 HOH HOH . H 4 HOH B 257 1145 525 HOH HOH . H 4 HOH B 258 1146 526 HOH HOH . H 4 HOH B 259 1147 527 HOH HOH . H 4 HOH B 260 1148 529 HOH HOH . H 4 HOH B 261 1149 530 HOH HOH . H 4 HOH B 262 1150 533 HOH HOH . H 4 HOH B 263 1151 534 HOH HOH . H 4 HOH B 264 1152 537 HOH HOH . H 4 HOH B 265 1153 539 HOH HOH . H 4 HOH B 266 1154 540 HOH HOH . H 4 HOH B 267 1155 542 HOH HOH . H 4 HOH B 268 1156 543 HOH HOH . H 4 HOH B 269 1157 545 HOH HOH . H 4 HOH B 270 1158 547 HOH HOH . H 4 HOH B 271 1159 549 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2B TDK . . . D 3 22.544 -32.329 18.848 1 20.82 ? O2B TDK 887 A 1 HETATM 2 P PB TDK . . . D 3 22.65 -31.904 17.422 1 20.99 ? PB TDK 887 A 1 HETATM 3 O O3B TDK . . . D 3 23.745 -30.98 17.037 1 21.15 ? O3B TDK 887 A 1 HETATM 4 O O1B TDK . . . D 3 21.247 -31.261 16.964 1 20.87 ? O1B TDK 887 A 1 HETATM 5 O O3A TDK . . . D 3 22.767 -33.265 16.537 1 20.97 ? O3A TDK 887 A 1 HETATM 6 P PA TDK . . . D 3 21.834 -33.62 15.264 1 21.13 ? PA TDK 887 A 1 HETATM 7 O O1A TDK . . . D 3 20.433 -33.204 15.525 1 20.91 ? O1A TDK 887 A 1 HETATM 8 O O2A TDK . . . D 3 22.087 -35.042 14.911 1 20.88 ? O2A TDK 887 A 1 HETATM 9 O O7 TDK . . . D 3 22.462 -32.698 14.117 1 21.42 ? O7 TDK 887 A 1 HETATM 10 C C7 TDK . . . D 3 23.832 -32.903 13.745 1 21.98 ? C7 TDK 887 A 1 HETATM 11 C C6 TDK . . . D 3 24.16 -32.093 12.567 1 22.96 ? C6 TDK 887 A 1 HETATM 12 C C5 TDK . . . D 3 25.505 -32.345 11.995 1 23.93 ? C5 TDK 887 A 1 HETATM 13 S S1 TDK . . . D 3 26.906 -31.951 12.913 1 24.89 ? S1 TDK 887 A 1 HETATM 14 C C4 TDK . . . D 3 25.874 -32.829 10.769 1 23.94 ? C4 TDK 887 A 1 HETATM 15 C CM4 TDK . . . D 3 24.951 -33.242 9.687 1 24.29 ? CM4 TDK 887 A 1 HETATM 16 N N3 TDK . . . D 3 27.246 -32.863 10.592 1 24.72 ? N3 TDK 887 A 1 HETATM 17 C C2 TDK . . . D 3 27.953 -32.408 11.652 1 24.36 ? C2 TDK 887 A 1 HETATM 18 C CMA TDK . . . D 3 29.428 -32.071 11.707 1 26.03 ? CMA TDK 887 A 1 HETATM 19 O OM1 TDK . . . D 3 30.179 -33.016 10.91 1 26.02 ? OM1 TDK 887 A 1 HETATM 20 C CMB TDK . . . D 3 29.894 -32.06 13.134 1 25.86 ? CMB TDK 887 A 1 HETATM 21 P PC TDK . . . D 3 29.582 -30.38 10.978 1 26.94 ? PC TDK 887 A 1 HETATM 22 O OM3 TDK . . . D 3 29.104 -30.406 9.56 1 26.18 ? OM3 TDK 887 A 1 HETATM 23 O OM2 TDK . . . D 3 31.164 -30.197 11.053 1 26.2 ? OM2 TDK 887 A 1 HETATM 24 C CMC TDK . . . D 3 32.041 -30.507 10.043 1 26.64 ? CMC TDK 887 A 1 HETATM 25 O OM4 TDK . . . D 3 28.94 -29.405 11.89 1 26.25 ? OM4 TDK 887 A 1 HETATM 26 C C7' TDK . . . D 3 27.875 -33.278 9.298 1 23.76 ? C7' TDK 887 A 1 HETATM 27 C C5' TDK . . . D 3 27.815 -34.782 9.055 1 23.27 ? C5' TDK 887 A 1 HETATM 28 C C6' TDK . . . D 3 27.159 -35.272 8.029 1 23.38 ? C6' TDK 887 A 1 HETATM 29 N N1' TDK . . . D 3 27.17 -36.573 7.741 1 22.95 ? N1' TDK 887 A 1 HETATM 30 C C2' TDK . . . D 3 27.868 -37.431 8.51 1 23.05 ? C2' TDK 887 A 1 HETATM 31 C CM2 TDK . . . D 3 27.868 -38.852 8.156 1 23 ? CM2 TDK 887 A 1 HETATM 32 N N3' TDK . . . D 3 28.549 -37.044 9.559 1 23.12 ? N3' TDK 887 A 1 HETATM 33 C C4' TDK . . . D 3 28.552 -35.727 9.867 1 23.42 ? C4' TDK 887 A 1 HETATM 34 N N4' TDK . . . D 3 29.236 -35.378 10.911 1 23.11 ? N4' TDK 887 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 34 #