data_2G5U # _model_server_result.job_id Kh2Imx_vC_1FRozTiLECeQ _model_server_result.datetime_utc '2024-11-22 08:24:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g5u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":239}' # _entry.id 2G5U # _exptl.entry_id 2G5U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.987 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G5U _cell.length_a 43.239 _cell.length_b 85.841 _cell.length_c 64.793 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G5U _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 43.239 85.841 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C12 H6 Cl4 O2' _chem_comp.formula_weight 323.987 _chem_comp.id PCQ _chem_comp.mon_nstd_flag . _chem_comp.name "3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C3 PCQ sing 218 n n CL2 C5 PCQ sing 219 n n O1 C4 PCQ sing 220 n n O1 HO1 PCQ sing 221 n n C1 C2 PCQ doub 222 n y C1 C6 PCQ sing 223 n y C1 C1' PCQ sing 224 n y C2 C3 PCQ sing 225 n y C2 H21 PCQ sing 226 n n C3 C4 PCQ doub 227 n y C4 C5 PCQ sing 228 n y C5 C6 PCQ doub 229 n y C6 H61 PCQ sing 230 n n CL3 C3' PCQ sing 231 n n CL4 C5' PCQ sing 232 n n O1' C4' PCQ sing 233 n n O1' HO1' PCQ sing 234 n n C1' C2' PCQ doub 235 n y C1' C6' PCQ sing 236 n y C2' C3' PCQ sing 237 n y C2' "H2'1" PCQ sing 238 n n C3' C4' PCQ doub 239 n y C4' C5' PCQ sing 240 n y C5' C6' PCQ doub 241 n y C6' "H6'1" PCQ sing 242 n n # _atom_sites.entry_id 2G5U _atom_sites.fract_transf_matrix[1][1] 0.023127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011649 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015434 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PCQ A 1 240 240 PCQ NEW . D 2 PCQ B 1 239 239 PCQ NEW . E 3 HOH A 1 241 1 HOH HOH . E 3 HOH A 2 242 2 HOH HOH . E 3 HOH A 3 243 5 HOH HOH . E 3 HOH A 4 244 7 HOH HOH . E 3 HOH A 5 245 8 HOH HOH . E 3 HOH A 6 246 10 HOH HOH . E 3 HOH A 7 247 11 HOH HOH . E 3 HOH A 8 248 12 HOH HOH . E 3 HOH A 9 249 13 HOH HOH . E 3 HOH A 10 250 14 HOH HOH . E 3 HOH A 11 251 16 HOH HOH . E 3 HOH A 12 252 18 HOH HOH . E 3 HOH A 13 253 21 HOH HOH . E 3 HOH A 14 254 25 HOH HOH . E 3 HOH A 15 255 26 HOH HOH . E 3 HOH A 16 256 28 HOH HOH . E 3 HOH A 17 257 29 HOH HOH . E 3 HOH A 18 258 30 HOH HOH . E 3 HOH A 19 259 32 HOH HOH . E 3 HOH A 20 260 34 HOH HOH . E 3 HOH A 21 261 36 HOH HOH . E 3 HOH A 22 262 38 HOH HOH . E 3 HOH A 23 263 39 HOH HOH . E 3 HOH A 24 264 40 HOH HOH . E 3 HOH A 25 265 42 HOH HOH . E 3 HOH A 26 266 43 HOH HOH . E 3 HOH A 27 267 45 HOH HOH . E 3 HOH A 28 268 47 HOH HOH . E 3 HOH A 29 269 49 HOH HOH . E 3 HOH A 30 270 50 HOH HOH . E 3 HOH A 31 271 51 HOH HOH . E 3 HOH A 32 272 52 HOH HOH . E 3 HOH A 33 273 54 HOH HOH . E 3 HOH A 34 274 55 HOH HOH . E 3 HOH A 35 275 57 HOH HOH . E 3 HOH A 36 276 59 HOH HOH . E 3 HOH A 37 277 61 HOH HOH . E 3 HOH A 38 278 62 HOH HOH . E 3 HOH A 39 279 67 HOH HOH . E 3 HOH A 40 280 72 HOH HOH . E 3 HOH A 41 281 75 HOH HOH . E 3 HOH A 42 282 77 HOH HOH . E 3 HOH A 43 283 79 HOH HOH . E 3 HOH A 44 284 82 HOH HOH . E 3 HOH A 45 285 84 HOH HOH . E 3 HOH A 46 286 85 HOH HOH . E 3 HOH A 47 287 89 HOH HOH . E 3 HOH A 48 288 90 HOH HOH . E 3 HOH A 49 289 91 HOH HOH . E 3 HOH A 50 290 92 HOH HOH . E 3 HOH A 51 291 93 HOH HOH . E 3 HOH A 52 292 94 HOH HOH . E 3 HOH A 53 293 95 HOH HOH . E 3 HOH A 54 294 98 HOH HOH . E 3 HOH A 55 295 103 HOH HOH . E 3 HOH A 56 296 105 HOH HOH . E 3 HOH A 57 297 110 HOH HOH . E 3 HOH A 58 298 113 HOH HOH . E 3 HOH A 59 299 118 HOH HOH . E 3 HOH A 60 300 123 HOH HOH . E 3 HOH A 61 301 124 HOH HOH . E 3 HOH A 62 302 125 HOH HOH . F 3 HOH B 1 240 3 HOH HOH . F 3 HOH B 2 241 4 HOH HOH . F 3 HOH B 3 242 6 HOH HOH . F 3 HOH B 4 243 9 HOH HOH . F 3 HOH B 5 244 15 HOH HOH . F 3 HOH B 6 245 17 HOH HOH . F 3 HOH B 7 246 19 HOH HOH . F 3 HOH B 8 247 20 HOH HOH . F 3 HOH B 9 248 22 HOH HOH . F 3 HOH B 10 249 23 HOH HOH . F 3 HOH B 11 250 24 HOH HOH . F 3 HOH B 12 251 27 HOH HOH . F 3 HOH B 13 252 31 HOH HOH . F 3 HOH B 14 253 33 HOH HOH . F 3 HOH B 15 254 35 HOH HOH . F 3 HOH B 16 255 37 HOH HOH . F 3 HOH B 17 256 41 HOH HOH . F 3 HOH B 18 257 44 HOH HOH . F 3 HOH B 19 258 46 HOH HOH . F 3 HOH B 20 259 48 HOH HOH . F 3 HOH B 21 260 53 HOH HOH . F 3 HOH B 22 261 56 HOH HOH . F 3 HOH B 23 262 58 HOH HOH . F 3 HOH B 24 263 60 HOH HOH . F 3 HOH B 25 264 63 HOH HOH . F 3 HOH B 26 265 64 HOH HOH . F 3 HOH B 27 266 65 HOH HOH . F 3 HOH B 28 267 66 HOH HOH . F 3 HOH B 29 268 68 HOH HOH . F 3 HOH B 30 269 69 HOH HOH . F 3 HOH B 31 270 70 HOH HOH . F 3 HOH B 32 271 71 HOH HOH . F 3 HOH B 33 272 73 HOH HOH . F 3 HOH B 34 273 74 HOH HOH . F 3 HOH B 35 274 76 HOH HOH . F 3 HOH B 36 275 78 HOH HOH . F 3 HOH B 37 276 80 HOH HOH . F 3 HOH B 38 277 81 HOH HOH . F 3 HOH B 39 278 83 HOH HOH . F 3 HOH B 40 279 86 HOH HOH . F 3 HOH B 41 280 87 HOH HOH . F 3 HOH B 42 281 88 HOH HOH . F 3 HOH B 43 282 96 HOH HOH . F 3 HOH B 44 283 97 HOH HOH . F 3 HOH B 45 284 99 HOH HOH . F 3 HOH B 46 285 100 HOH HOH . F 3 HOH B 47 286 101 HOH HOH . F 3 HOH B 48 287 104 HOH HOH . F 3 HOH B 49 288 106 HOH HOH . F 3 HOH B 50 289 109 HOH HOH . F 3 HOH B 51 290 111 HOH HOH . F 3 HOH B 52 291 112 HOH HOH . F 3 HOH B 53 292 114 HOH HOH . F 3 HOH B 54 293 117 HOH HOH . F 3 HOH B 55 294 120 HOH HOH . F 3 HOH B 56 295 121 HOH HOH . F 3 HOH B 57 296 122 HOH HOH . F 3 HOH B 58 297 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL1 PCQ . . . D 2 21.498 40.331 22.037 0.5 45.79 ? CL1 PCQ 239 B 1 HETATM 2 CL CL2 PCQ . . . D 2 21.418 45.371 21.979 0.5 47.37 ? CL2 PCQ 239 B 1 HETATM 3 O O1 PCQ . . . D 2 21.4 42.819 20.691 0.5 48.34 ? O1 PCQ 239 B 1 HETATM 4 C C1 PCQ . . . D 2 21.577 42.894 24.876 0.5 47.58 ? C1 PCQ 239 B 1 HETATM 5 C C2 PCQ . . . D 2 21.567 41.682 24.173 0.5 47.4 ? C2 PCQ 239 B 1 HETATM 6 C C3 PCQ . . . D 2 21.509 41.653 22.773 0.5 47.18 ? C3 PCQ 239 B 1 HETATM 7 C C4 PCQ . . . D 2 21.46 42.849 22.058 0.5 47.35 ? C4 PCQ 239 B 1 HETATM 8 C C5 PCQ . . . D 2 21.467 44.067 22.74 0.5 47.65 ? C5 PCQ 239 B 1 HETATM 9 C C6 PCQ . . . D 2 21.523 44.081 24.139 0.5 47.66 ? C6 PCQ 239 B 1 HETATM 10 CL CL3 PCQ . . . D 2 20.181 44.956 29.147 0.5 49.84 ? CL3 PCQ 239 B 1 HETATM 11 CL CL4 PCQ . . . D 2 23.315 40.982 29.09 0.5 49.71 ? CL4 PCQ 239 B 1 HETATM 12 O O1' PCQ . . . D 2 21.807 42.985 30.475 0.5 50.73 ? O1' PCQ 239 B 1 HETATM 13 C C1' PCQ . . . D 2 21.633 42.918 26.28 0.5 48.72 ? C1' PCQ 239 B 1 HETATM 14 C C2' PCQ . . . D 2 20.922 43.87 27.019 0.5 49.63 ? C2' PCQ 239 B 1 HETATM 15 C C3' PCQ . . . D 2 20.976 43.9 28.417 0.5 49.8 ? C3' PCQ 239 B 1 HETATM 16 C C4' PCQ . . . D 2 21.749 42.967 29.108 0.5 49.8 ? C4' PCQ 239 B 1 HETATM 17 C C5' PCQ . . . D 2 22.464 42.011 28.389 0.5 49.73 ? C5' PCQ 239 B 1 HETATM 18 C C6' PCQ . . . D 2 22.405 41.991 26.991 0.5 49.56 ? C6' PCQ 239 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 18 #