data_2G70 # _model_server_result.job_id '_MbXpCzvEOxJrQYy9NBaNg' _model_server_result.datetime_utc '2024-11-24 10:40:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g70 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":5002}' # _entry.id 2G70 # _exptl.entry_id 2G70 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 208.214 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(3R)-7-NITRO-1,2,3,4-TETRAHYDROISOQUINOLIN-3-YL]METHANOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G70 _cell.length_a 94.24 _cell.length_b 94.24 _cell.length_c 187.81 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G70 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,B,C,D,E,F,G,H,I,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 48 A CYS 48 1_555 B SG CYS 139 B CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 139 A CYS 139 1_555 B SG CYS 48 B CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C10 H12 N2 O3' _chem_comp.formula_weight 208.214 _chem_comp.id HNT _chem_comp.mon_nstd_flag . _chem_comp.name '[(3R)-7-NITRO-1,2,3,4-TETRAHYDROISOQUINOLIN-3-YL]METHANOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '3(R)-HYDROXYMETHYL 7-NITRO 1,2,3,4-TETRAHYDROISOQUINOLINE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 HNT sing 150 n n C1 C8A HNT sing 151 n n C1 H11 HNT sing 152 n n C1 H12 HNT sing 153 n n C2 C22 HNT sing 154 n n C2 N41 HNT sing 155 n n C2 H2 HNT sing 156 n n O2 N1 HNT sing 157 n n C4 C4A HNT sing 158 n n C4 N41 HNT sing 159 n n C4 H41A HNT sing 160 n n C4 H42 HNT sing 161 n n C5 C6 HNT sing 162 n y C5 C4A HNT doub 163 n y C5 H5 HNT sing 164 n n C6 C7 HNT doub 165 n y C6 N1 HNT sing 166 n n C7 C8 HNT sing 167 n y C7 H7 HNT sing 168 n n C8 C8A HNT doub 169 n y C8 H8 HNT sing 170 n n O22 C22 HNT sing 171 n n O22 H22 HNT sing 172 n n C22 H221 HNT sing 173 n n C22 H222 HNT sing 174 n n C8A C4A HNT sing 175 n y N1 O3 HNT doub 176 n n N41 H41 HNT sing 177 n n # _atom_sites.entry_id 2G70 _atom_sites.fract_transf_matrix[1][1] 0.010611 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAM A 1 2001 2001 SAM SAM . D 3 HNT A 1 5001 5001 HNT HNT . E 3 HNT A 1 5003 5003 HNT HNT . F 4 PO4 B 1 502 502 PO4 PO4 . G 2 SAM B 1 2002 2002 SAM SAM . H 3 HNT B 1 5002 5002 HNT HNT . I 5 HOH A 1 5004 2 HOH HOH . I 5 HOH A 2 5005 3 HOH HOH . I 5 HOH A 3 5006 5 HOH HOH . I 5 HOH A 4 5007 7 HOH HOH . I 5 HOH A 5 5008 11 HOH HOH . I 5 HOH A 6 5009 13 HOH HOH . I 5 HOH A 7 5010 15 HOH HOH . I 5 HOH A 8 5011 20 HOH HOH . I 5 HOH A 9 5012 23 HOH HOH . I 5 HOH A 10 5013 25 HOH HOH . I 5 HOH A 11 5014 27 HOH HOH . I 5 HOH A 12 5015 28 HOH HOH . I 5 HOH A 13 5016 29 HOH HOH . I 5 HOH A 14 5017 32 HOH HOH . I 5 HOH A 15 5018 33 HOH HOH . I 5 HOH A 16 5019 34 HOH HOH . I 5 HOH A 17 5020 35 HOH HOH . I 5 HOH A 18 5021 36 HOH HOH . I 5 HOH A 19 5022 37 HOH HOH . I 5 HOH A 20 5023 38 HOH HOH . I 5 HOH A 21 5024 40 HOH HOH . I 5 HOH A 22 5025 44 HOH HOH . I 5 HOH A 23 5026 46 HOH HOH . I 5 HOH A 24 5027 47 HOH HOH . I 5 HOH A 25 5028 50 HOH HOH . I 5 HOH A 26 5029 51 HOH HOH . I 5 HOH A 27 5030 53 HOH HOH . I 5 HOH A 28 5031 56 HOH HOH . I 5 HOH A 29 5032 61 HOH HOH . I 5 HOH A 30 5033 66 HOH HOH . I 5 HOH A 31 5034 67 HOH HOH . I 5 HOH A 32 5035 74 HOH HOH . I 5 HOH A 33 5036 76 HOH HOH . I 5 HOH A 34 5037 77 HOH HOH . I 5 HOH A 35 5038 85 HOH HOH . I 5 HOH A 36 5039 86 HOH HOH . I 5 HOH A 37 5040 87 HOH HOH . J 5 HOH B 1 5003 1 HOH HOH . J 5 HOH B 2 5004 4 HOH HOH . J 5 HOH B 3 5005 6 HOH HOH . J 5 HOH B 4 5006 8 HOH HOH . J 5 HOH B 5 5007 10 HOH HOH . J 5 HOH B 6 5008 12 HOH HOH . J 5 HOH B 7 5009 14 HOH HOH . J 5 HOH B 8 5010 16 HOH HOH . J 5 HOH B 9 5011 17 HOH HOH . J 5 HOH B 10 5012 18 HOH HOH . J 5 HOH B 11 5013 19 HOH HOH . J 5 HOH B 12 5014 21 HOH HOH . J 5 HOH B 13 5015 22 HOH HOH . J 5 HOH B 14 5016 24 HOH HOH . J 5 HOH B 15 5017 26 HOH HOH . J 5 HOH B 16 5018 30 HOH HOH . J 5 HOH B 17 5019 31 HOH HOH . J 5 HOH B 18 5020 39 HOH HOH . J 5 HOH B 19 5021 42 HOH HOH . J 5 HOH B 20 5022 43 HOH HOH . J 5 HOH B 21 5023 45 HOH HOH . J 5 HOH B 22 5024 48 HOH HOH . J 5 HOH B 23 5025 49 HOH HOH . J 5 HOH B 24 5026 52 HOH HOH . J 5 HOH B 25 5027 54 HOH HOH . J 5 HOH B 26 5028 55 HOH HOH . J 5 HOH B 27 5029 57 HOH HOH . J 5 HOH B 28 5030 58 HOH HOH . J 5 HOH B 29 5031 59 HOH HOH . J 5 HOH B 30 5032 60 HOH HOH . J 5 HOH B 31 5033 63 HOH HOH . J 5 HOH B 32 5034 64 HOH HOH . J 5 HOH B 33 5035 65 HOH HOH . J 5 HOH B 34 5036 68 HOH HOH . J 5 HOH B 35 5037 69 HOH HOH . J 5 HOH B 36 5038 70 HOH HOH . J 5 HOH B 37 5039 71 HOH HOH . J 5 HOH B 38 5040 72 HOH HOH . J 5 HOH B 39 5041 73 HOH HOH . J 5 HOH B 40 5042 75 HOH HOH . J 5 HOH B 41 5043 78 HOH HOH . J 5 HOH B 42 5044 79 HOH HOH . J 5 HOH B 43 5045 80 HOH HOH . J 5 HOH B 44 5046 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HNT . . . H 3 27.464 57.479 -28.726 1 60.6 ? C1 HNT 5002 B 1 HETATM 2 C C2 HNT . . . H 3 27 58.244 -29.966 1 61.34 ? C2 HNT 5002 B 1 HETATM 3 O O2 HNT . . . H 3 24.292 60.577 -23.968 1 62.69 ? O2 HNT 5002 B 1 HETATM 4 C C4 HNT . . . H 3 25.977 60.098 -28.731 1 58.86 ? C4 HNT 5002 B 1 HETATM 5 C C5 HNT . . . H 3 25.419 59.643 -26.321 1 59.04 ? C5 HNT 5002 B 1 HETATM 6 C C6 HNT . . . H 3 25.447 58.86 -25.17 1 59.98 ? C6 HNT 5002 B 1 HETATM 7 C C7 HNT . . . H 3 26.089 57.625 -25.193 1 58.42 ? C7 HNT 5002 B 1 HETATM 8 C C8 HNT . . . H 3 26.712 57.186 -26.356 1 58.23 ? C8 HNT 5002 B 1 HETATM 9 O O22 HNT . . . H 3 27.068 57.504 -32.265 1 69.38 ? O22 HNT 5002 B 1 HETATM 10 C C22 HNT . . . H 3 27.89 57.871 -31.153 1 63.06 ? C22 HNT 5002 B 1 HETATM 11 C C8A HNT . . . H 3 26.695 57.977 -27.501 1 59.42 ? C8A HNT 5002 B 1 HETATM 12 N N1 HNT . . . H 3 24.935 59.312 -24.029 1 62.38 ? N1 HNT 5002 B 1 HETATM 13 O O3 HNT . . . H 3 25.048 58.531 -22.847 1 66.34 ? O3 HNT 5002 B 1 HETATM 14 C C4A HNT . . . H 3 26.041 59.206 -27.487 1 59.81 ? C4A HNT 5002 B 1 HETATM 15 N N41 HNT . . . H 3 27 59.694 -29.711 1 60.82 ? N41 HNT 5002 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #