data_2G7Q # _model_server_result.job_id I1FXnCAJ7E3mCl6a1aUPWA _model_server_result.datetime_utc '2024-11-08 06:38:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":500}' # _entry.id 2G7Q # _exptl.entry_id 2G7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.216 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-HYDROXY-L-ARGININAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G7Q _cell.length_a 69.32 _cell.length_b 109.94 _cell.length_c 166.64 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 222 A HIS 222 1_555 C ZN ZN . A ZN 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc2 A NE2 HIS 226 A HIS 226 1_555 C ZN ZN . A ZN 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc3 A OE2 GLU 261 A GLU 261 1_555 C ZN ZN . A ZN 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc4 A OE1 GLU 261 A GLU 261 1_555 C ZN ZN . A ZN 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc5 C ZN ZN . A ZN 452 1_555 D O1 AHL . A AHL 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc6 C ZN ZN . A ZN 452 1_555 D O2 AHL . A AHL 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc7 B NE2 HIS 222 B HIS 222 1_555 E ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc8 B NE2 HIS 226 B HIS 226 1_555 E ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc9 B OE1 GLU 261 B GLU 261 1_555 E ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc10 B OE2 GLU 261 B GLU 261 1_555 E ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? # _chem_comp.formula 'C6 H15 N5 O2' _chem_comp.formula_weight 189.216 _chem_comp.id AHL _chem_comp.mon_nstd_flag n _chem_comp.name N-HYDROXY-L-ARGININAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'L-ARGININE HYDROXAMATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA AHL sing 1 n n N1 HN11 AHL sing 2 n n N1 HN12 AHL sing 3 n n CA CB AHL sing 4 n n CA C AHL sing 5 n n CA HA AHL sing 6 n n CB CG AHL sing 7 n n CB HB1 AHL sing 8 n n CB HB2 AHL sing 9 n n CG CD AHL sing 10 n n CG HG1 AHL sing 11 n n CG HG2 AHL sing 12 n n CD NE AHL sing 13 n n CD HD1 AHL sing 14 n n CD HD2 AHL sing 15 n n NE CZ AHL sing 16 n n NE HNE AHL sing 17 n n CZ NH1 AHL sing 18 n n CZ NH2 AHL doub 19 e n NH1 HH11 AHL sing 20 n n NH1 HH12 AHL sing 21 n n NH2 HNH2 AHL sing 22 n n C O1 AHL doub 23 n n C N2 AHL sing 24 n n N2 O2 AHL sing 25 n n N2 HN2 AHL sing 26 n n O2 HO2 AHL sing 27 n n # _atom_sites.entry_id 2G7Q _atom_sites.fract_transf_matrix[1][1] 0.014426 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 452 452 ZN ZN . D 3 AHL A 1 500 500 AHL AHL . E 2 ZN B 1 451 451 ZN ZN . F 4 HOH A 1 501 501 HOH HOH . F 4 HOH A 2 502 502 HOH HOH . F 4 HOH A 3 503 503 HOH HOH . F 4 HOH A 4 504 504 HOH HOH . F 4 HOH A 5 506 506 HOH HOH . F 4 HOH A 6 507 507 HOH HOH . F 4 HOH A 7 508 508 HOH HOH . F 4 HOH A 8 509 509 HOH HOH . F 4 HOH A 9 511 511 HOH HOH . F 4 HOH A 10 512 512 HOH HOH . F 4 HOH A 11 513 513 HOH HOH . F 4 HOH A 12 514 514 HOH HOH . F 4 HOH A 13 515 515 HOH HOH . F 4 HOH A 14 516 516 HOH HOH . F 4 HOH A 15 517 517 HOH HOH . F 4 HOH A 16 518 518 HOH HOH . F 4 HOH A 17 519 519 HOH HOH . F 4 HOH A 18 521 521 HOH HOH . F 4 HOH A 19 522 522 HOH HOH . F 4 HOH A 20 523 523 HOH HOH . F 4 HOH A 21 524 524 HOH HOH . F 4 HOH A 22 528 528 HOH HOH . F 4 HOH A 23 529 529 HOH HOH . F 4 HOH A 24 530 530 HOH HOH . F 4 HOH A 25 531 531 HOH HOH . F 4 HOH A 26 532 532 HOH HOH . F 4 HOH A 27 533 533 HOH HOH . F 4 HOH A 28 536 536 HOH HOH . F 4 HOH A 29 537 537 HOH HOH . F 4 HOH A 30 539 539 HOH HOH . F 4 HOH A 31 540 540 HOH HOH . F 4 HOH A 32 541 541 HOH HOH . F 4 HOH A 33 543 543 HOH HOH . F 4 HOH A 34 544 544 HOH HOH . F 4 HOH A 35 546 546 HOH HOH . F 4 HOH A 36 547 547 HOH HOH . F 4 HOH A 37 548 548 HOH HOH . F 4 HOH A 38 549 549 HOH HOH . F 4 HOH A 39 551 551 HOH HOH . F 4 HOH A 40 552 552 HOH HOH . F 4 HOH A 41 555 555 HOH HOH . F 4 HOH A 42 556 556 HOH HOH . F 4 HOH A 43 558 558 HOH HOH . F 4 HOH A 44 559 559 HOH HOH . F 4 HOH A 45 561 561 HOH HOH . F 4 HOH A 46 562 562 HOH HOH . F 4 HOH A 47 564 564 HOH HOH . F 4 HOH A 48 565 565 HOH HOH . F 4 HOH A 49 568 568 HOH HOH . F 4 HOH A 50 569 569 HOH HOH . F 4 HOH A 51 572 572 HOH HOH . F 4 HOH A 52 575 575 HOH HOH . F 4 HOH A 53 577 577 HOH HOH . F 4 HOH A 54 579 579 HOH HOH . F 4 HOH A 55 580 580 HOH HOH . F 4 HOH A 56 581 581 HOH HOH . F 4 HOH A 57 582 582 HOH HOH . F 4 HOH A 58 583 583 HOH HOH . F 4 HOH A 59 585 585 HOH HOH . F 4 HOH A 60 587 587 HOH HOH . F 4 HOH A 61 589 589 HOH HOH . F 4 HOH A 62 591 591 HOH HOH . F 4 HOH A 63 592 592 HOH HOH . F 4 HOH A 64 595 595 HOH HOH . F 4 HOH A 65 597 597 HOH HOH . F 4 HOH A 66 598 598 HOH HOH . F 4 HOH A 67 599 599 HOH HOH . F 4 HOH A 68 604 604 HOH HOH . F 4 HOH A 69 605 605 HOH HOH . F 4 HOH A 70 606 606 HOH HOH . F 4 HOH A 71 607 607 HOH HOH . F 4 HOH A 72 608 608 HOH HOH . F 4 HOH A 73 610 610 HOH HOH . F 4 HOH A 74 612 612 HOH HOH . F 4 HOH A 75 613 613 HOH HOH . F 4 HOH A 76 614 614 HOH HOH . F 4 HOH A 77 615 615 HOH HOH . F 4 HOH A 78 616 616 HOH HOH . F 4 HOH A 79 617 617 HOH HOH . F 4 HOH A 80 618 618 HOH HOH . F 4 HOH A 81 619 619 HOH HOH . F 4 HOH A 82 620 620 HOH HOH . F 4 HOH A 83 621 621 HOH HOH . F 4 HOH A 84 622 622 HOH HOH . F 4 HOH A 85 623 623 HOH HOH . F 4 HOH A 86 625 625 HOH HOH . F 4 HOH A 87 627 627 HOH HOH . F 4 HOH A 88 628 628 HOH HOH . F 4 HOH A 89 630 630 HOH HOH . F 4 HOH A 90 631 631 HOH HOH . F 4 HOH A 91 632 632 HOH HOH . F 4 HOH A 92 636 636 HOH HOH . F 4 HOH A 93 639 639 HOH HOH . F 4 HOH A 94 640 640 HOH HOH . F 4 HOH A 95 641 641 HOH HOH . F 4 HOH A 96 643 643 HOH HOH . F 4 HOH A 97 644 644 HOH HOH . F 4 HOH A 98 646 646 HOH HOH . F 4 HOH A 99 647 647 HOH HOH . F 4 HOH A 100 648 648 HOH HOH . F 4 HOH A 101 649 649 HOH HOH . F 4 HOH A 102 654 654 HOH HOH . F 4 HOH A 103 656 656 HOH HOH . F 4 HOH A 104 657 657 HOH HOH . G 4 HOH B 1 505 505 HOH HOH . G 4 HOH B 2 510 510 HOH HOH . G 4 HOH B 3 520 520 HOH HOH . G 4 HOH B 4 525 525 HOH HOH . G 4 HOH B 5 526 526 HOH HOH . G 4 HOH B 6 527 527 HOH HOH . G 4 HOH B 7 534 534 HOH HOH . G 4 HOH B 8 535 535 HOH HOH . G 4 HOH B 9 538 538 HOH HOH . G 4 HOH B 10 542 542 HOH HOH . G 4 HOH B 11 545 545 HOH HOH . G 4 HOH B 12 550 550 HOH HOH . G 4 HOH B 13 553 553 HOH HOH . G 4 HOH B 14 554 554 HOH HOH . G 4 HOH B 15 557 557 HOH HOH . G 4 HOH B 16 560 560 HOH HOH . G 4 HOH B 17 563 563 HOH HOH . G 4 HOH B 18 566 566 HOH HOH . G 4 HOH B 19 567 567 HOH HOH . G 4 HOH B 20 570 570 HOH HOH . G 4 HOH B 21 571 571 HOH HOH . G 4 HOH B 22 573 573 HOH HOH . G 4 HOH B 23 574 574 HOH HOH . G 4 HOH B 24 576 576 HOH HOH . G 4 HOH B 25 578 578 HOH HOH . G 4 HOH B 26 584 584 HOH HOH . G 4 HOH B 27 586 586 HOH HOH . G 4 HOH B 28 588 588 HOH HOH . G 4 HOH B 29 590 590 HOH HOH . G 4 HOH B 30 593 593 HOH HOH . G 4 HOH B 31 594 594 HOH HOH . G 4 HOH B 32 596 596 HOH HOH . G 4 HOH B 33 600 600 HOH HOH . G 4 HOH B 34 601 601 HOH HOH . G 4 HOH B 35 602 602 HOH HOH . G 4 HOH B 36 603 603 HOH HOH . G 4 HOH B 37 609 609 HOH HOH . G 4 HOH B 38 611 611 HOH HOH . G 4 HOH B 39 624 624 HOH HOH . G 4 HOH B 40 626 626 HOH HOH . G 4 HOH B 41 629 629 HOH HOH . G 4 HOH B 42 633 633 HOH HOH . G 4 HOH B 43 634 634 HOH HOH . G 4 HOH B 44 635 635 HOH HOH . G 4 HOH B 45 637 637 HOH HOH . G 4 HOH B 46 638 638 HOH HOH . G 4 HOH B 47 642 642 HOH HOH . G 4 HOH B 48 645 645 HOH HOH . G 4 HOH B 49 650 650 HOH HOH . G 4 HOH B 50 651 651 HOH HOH . G 4 HOH B 51 652 652 HOH HOH . G 4 HOH B 52 653 653 HOH HOH . G 4 HOH B 53 655 655 HOH HOH . G 4 HOH B 54 658 658 HOH HOH . G 4 HOH B 55 659 659 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AHL . . . D 3 12.672 33.01 63.063 1 41.86 ? N1 AHL 500 A 1 HETATM 2 C CA AHL . . . D 3 11.272 33.299 63.14 1 41.76 ? CA AHL 500 A 1 HETATM 3 C CB AHL . . . D 3 10.744 33.432 61.728 1 39.74 ? CB AHL 500 A 1 HETATM 4 C CG AHL . . . D 3 9.384 34.114 61.745 1 38.92 ? CG AHL 500 A 1 HETATM 5 C CD AHL . . . D 3 8.783 34.295 60.371 1 38.28 ? CD AHL 500 A 1 HETATM 6 N NE AHL . . . D 3 8.398 33.016 59.74 1 38.64 ? NE AHL 500 A 1 HETATM 7 C CZ AHL . . . D 3 8.45 32.72 58.437 1 38.24 ? CZ AHL 500 A 1 HETATM 8 N NH1 AHL . . . D 3 9.245 33.382 57.61 1 37.61 ? NH1 AHL 500 A 1 HETATM 9 N NH2 AHL . . . D 3 7.682 31.746 57.965 1 38.73 ? NH2 AHL 500 A 1 HETATM 10 C C AHL . . . D 3 10.501 32.178 63.862 1 41.54 ? C AHL 500 A 1 HETATM 11 O O1 AHL . . . D 3 10.397 31.054 63.321 1 42.3 ? O1 AHL 500 A 1 HETATM 12 N N2 AHL . . . D 3 10.019 32.404 64.905 1 42.2 ? N2 AHL 500 A 1 HETATM 13 O O2 AHL . . . D 3 9.321 31.52 65.619 1 42.2 ? O2 AHL 500 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #