data_2G9Q # _model_server_result.job_id '_rBrhFrvJf04-hvBzWexMQ' _model_server_result.datetime_utc '2024-10-19 05:29:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2g9q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":995}' # _entry.id 2G9Q # _exptl.entry_id 2G9Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2G9Q _cell.length_a 128.712 _cell.length_b 128.712 _cell.length_c 117.442 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2G9Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 117.442 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 679 A MET 679 1_555 A N LLP 680 A LLP 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C LLP 680 A LLP 680 1_555 A N PHE 681 A PHE 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 327 n n P O2 PO4 sing 328 n n P O3 PO4 sing 329 n n P O4 PO4 sing 330 n n # _atom_sites.entry_id 2G9Q _atom_sites.fract_transf_matrix[1][1] 0.007769 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007769 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 997 997 PO4 PO4 . C 2 PO4 A 1 996 996 PO4 PO4 . D 2 PO4 A 1 995 995 PO4 PO4 . E 3 1AB A 1 998 998 1AB DAB . F 4 HOH A 1 999 1 HOH WAT . F 4 HOH A 2 1000 2 HOH WAT . F 4 HOH A 3 1001 3 HOH WAT . F 4 HOH A 4 1002 4 HOH WAT . F 4 HOH A 5 1003 5 HOH WAT . F 4 HOH A 6 1004 6 HOH WAT . F 4 HOH A 7 1005 7 HOH WAT . F 4 HOH A 8 1006 8 HOH WAT . F 4 HOH A 9 1007 9 HOH WAT . F 4 HOH A 10 1008 10 HOH WAT . F 4 HOH A 11 1009 11 HOH WAT . F 4 HOH A 12 1010 12 HOH WAT . F 4 HOH A 13 1011 13 HOH WAT . F 4 HOH A 14 1012 14 HOH WAT . F 4 HOH A 15 1013 15 HOH WAT . F 4 HOH A 16 1014 16 HOH WAT . F 4 HOH A 17 1015 17 HOH WAT . F 4 HOH A 18 1016 18 HOH WAT . F 4 HOH A 19 1017 19 HOH WAT . F 4 HOH A 20 1018 20 HOH WAT . F 4 HOH A 21 1019 21 HOH WAT . F 4 HOH A 22 1020 22 HOH WAT . F 4 HOH A 23 1021 23 HOH WAT . F 4 HOH A 24 1022 24 HOH WAT . F 4 HOH A 25 1023 25 HOH WAT . F 4 HOH A 26 1024 26 HOH WAT . F 4 HOH A 27 1025 27 HOH WAT . F 4 HOH A 28 1026 28 HOH WAT . F 4 HOH A 29 1027 29 HOH WAT . F 4 HOH A 30 1028 30 HOH WAT . F 4 HOH A 31 1029 31 HOH WAT . F 4 HOH A 32 1030 32 HOH WAT . F 4 HOH A 33 1031 33 HOH WAT . F 4 HOH A 34 1032 34 HOH WAT . F 4 HOH A 35 1033 35 HOH WAT . F 4 HOH A 36 1034 36 HOH WAT . F 4 HOH A 37 1035 37 HOH WAT . F 4 HOH A 38 1036 38 HOH WAT . F 4 HOH A 39 1037 39 HOH WAT . F 4 HOH A 40 1038 40 HOH WAT . F 4 HOH A 41 1039 41 HOH WAT . F 4 HOH A 42 1040 42 HOH WAT . F 4 HOH A 43 1041 43 HOH WAT . F 4 HOH A 44 1042 44 HOH WAT . F 4 HOH A 45 1043 45 HOH WAT . F 4 HOH A 46 1044 46 HOH WAT . F 4 HOH A 47 1045 47 HOH WAT . F 4 HOH A 48 1046 48 HOH WAT . F 4 HOH A 49 1047 49 HOH WAT . F 4 HOH A 50 1048 50 HOH WAT . F 4 HOH A 51 1049 51 HOH WAT . F 4 HOH A 52 1050 52 HOH WAT . F 4 HOH A 53 1051 53 HOH WAT . F 4 HOH A 54 1052 54 HOH WAT . F 4 HOH A 55 1053 55 HOH WAT . F 4 HOH A 56 1054 56 HOH WAT . F 4 HOH A 57 1055 57 HOH WAT . F 4 HOH A 58 1056 58 HOH WAT . F 4 HOH A 59 1057 59 HOH WAT . F 4 HOH A 60 1058 60 HOH WAT . F 4 HOH A 61 1059 61 HOH WAT . F 4 HOH A 62 1060 62 HOH WAT . F 4 HOH A 63 1061 63 HOH WAT . F 4 HOH A 64 1062 64 HOH WAT . F 4 HOH A 65 1063 65 HOH WAT . F 4 HOH A 66 1064 66 HOH WAT . F 4 HOH A 67 1065 67 HOH WAT . F 4 HOH A 68 1066 68 HOH WAT . F 4 HOH A 69 1067 69 HOH WAT . F 4 HOH A 70 1068 70 HOH WAT . F 4 HOH A 71 1069 71 HOH WAT . F 4 HOH A 72 1070 72 HOH WAT . F 4 HOH A 73 1071 73 HOH WAT . F 4 HOH A 74 1072 74 HOH WAT . F 4 HOH A 75 1073 75 HOH WAT . F 4 HOH A 76 1074 76 HOH WAT . F 4 HOH A 77 1075 77 HOH WAT . F 4 HOH A 78 1076 78 HOH WAT . F 4 HOH A 79 1077 79 HOH WAT . F 4 HOH A 80 1078 80 HOH WAT . F 4 HOH A 81 1079 81 HOH WAT . F 4 HOH A 82 1080 82 HOH WAT . F 4 HOH A 83 1081 83 HOH WAT . F 4 HOH A 84 1082 84 HOH WAT . F 4 HOH A 85 1083 85 HOH WAT . F 4 HOH A 86 1084 86 HOH WAT . F 4 HOH A 87 1085 87 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 32.524 25.806 31.57 1 49.26 ? P PO4 995 A 1 HETATM 2 O O1 PO4 . . . D 2 32.654 24.724 30.526 1 50.03 ? O1 PO4 995 A 1 HETATM 3 O O2 PO4 . . . D 2 31.884 25.22 32.81 1 48.79 ? O2 PO4 995 A 1 HETATM 4 O O3 PO4 . . . D 2 33.904 26.303 31.899 1 49.36 ? O3 PO4 995 A 1 HETATM 5 O O4 PO4 . . . D 2 31.673 26.933 31.031 1 49.55 ? O4 PO4 995 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #