data_2GA1
#
_model_server_result.job_id            wdO36RpvOuniJnxi0rcuUg 
_model_server_result.datetime_utc      '2024-11-05 00:30:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ga1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":106}' 
#
_entry.id    2GA1 
#
_exptl.entry_id    2GA1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GA1 
_cell.length_a            46.98 
_cell.length_b            65.12 
_cell.length_c            86.86 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GA1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C MSE 2 A MSE 1 1_555 A N ASN 3 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 A C GLN 28 A GLN 27 1_555 A N MSE 29 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale4 A C MSE 29 A MSE 28 1_555 A N LEU 30 A LEU 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale5 B C MSE 2 B MSE 1 1_555 B N ASN 3 B ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale6 B C GLN 28 B GLN 27 1_555 B N MSE 29 B MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale7 B C MSE 29 B MSE 28 1_555 B N LEU 30 B LEU 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2GA1 
_atom_sites.fract_transf_matrix[1][1]    0.02129 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01536 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01151 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL B 1 106 1 GOL GOL . 
D 3 HOH A 1 106 3 HOH HOH . 
D 3 HOH A 2 107 4 HOH HOH . 
D 3 HOH A 3 108 5 HOH HOH . 
D 3 HOH A 4 109 6 HOH HOH . 
D 3 HOH A 5 110 7 HOH HOH . 
D 3 HOH A 6 111 10 HOH HOH . 
D 3 HOH A 7 112 12 HOH HOH . 
D 3 HOH A 8 113 13 HOH HOH . 
D 3 HOH A 9 114 16 HOH HOH . 
D 3 HOH A 10 115 17 HOH HOH . 
D 3 HOH A 11 116 19 HOH HOH . 
D 3 HOH A 12 117 20 HOH HOH . 
D 3 HOH A 13 118 22 HOH HOH . 
D 3 HOH A 14 119 23 HOH HOH . 
D 3 HOH A 15 120 24 HOH HOH . 
D 3 HOH A 16 121 27 HOH HOH . 
D 3 HOH A 17 122 29 HOH HOH . 
D 3 HOH A 18 123 30 HOH HOH . 
D 3 HOH A 19 124 31 HOH HOH . 
D 3 HOH A 20 125 33 HOH HOH . 
D 3 HOH A 21 126 34 HOH HOH . 
D 3 HOH A 22 127 37 HOH HOH . 
D 3 HOH A 23 128 39 HOH HOH . 
D 3 HOH A 24 129 41 HOH HOH . 
D 3 HOH A 25 130 43 HOH HOH . 
D 3 HOH A 26 131 45 HOH HOH . 
D 3 HOH A 27 132 46 HOH HOH . 
D 3 HOH A 28 133 47 HOH HOH . 
D 3 HOH A 29 134 48 HOH HOH . 
D 3 HOH A 30 135 49 HOH HOH . 
D 3 HOH A 31 136 50 HOH HOH . 
D 3 HOH A 32 137 51 HOH HOH . 
D 3 HOH A 33 138 52 HOH HOH . 
D 3 HOH A 34 139 54 HOH HOH . 
D 3 HOH A 35 140 55 HOH HOH . 
D 3 HOH A 36 141 57 HOH HOH . 
D 3 HOH A 37 142 58 HOH HOH . 
D 3 HOH A 38 143 60 HOH HOH . 
D 3 HOH A 39 144 61 HOH HOH . 
D 3 HOH A 40 145 62 HOH HOH . 
D 3 HOH A 41 146 63 HOH HOH . 
D 3 HOH A 42 147 65 HOH HOH . 
D 3 HOH A 43 148 68 HOH HOH . 
D 3 HOH A 44 149 69 HOH HOH . 
D 3 HOH A 45 150 70 HOH HOH . 
D 3 HOH A 46 151 71 HOH HOH . 
D 3 HOH A 47 152 73 HOH HOH . 
D 3 HOH A 48 153 75 HOH HOH . 
D 3 HOH A 49 154 76 HOH HOH . 
D 3 HOH A 50 155 79 HOH HOH . 
D 3 HOH A 51 156 81 HOH HOH . 
D 3 HOH A 52 157 82 HOH HOH . 
D 3 HOH A 53 158 83 HOH HOH . 
D 3 HOH A 54 159 84 HOH HOH . 
D 3 HOH A 55 160 86 HOH HOH . 
D 3 HOH A 56 161 87 HOH HOH . 
D 3 HOH A 57 162 88 HOH HOH . 
D 3 HOH A 58 163 90 HOH HOH . 
D 3 HOH A 59 164 92 HOH HOH . 
D 3 HOH A 60 165 94 HOH HOH . 
D 3 HOH A 61 166 102 HOH HOH . 
D 3 HOH A 62 167 103 HOH HOH . 
D 3 HOH A 63 168 104 HOH HOH . 
D 3 HOH A 64 169 107 HOH HOH . 
D 3 HOH A 65 170 109 HOH HOH . 
D 3 HOH A 66 171 110 HOH HOH . 
D 3 HOH A 67 172 112 HOH HOH . 
D 3 HOH A 68 173 113 HOH HOH . 
D 3 HOH A 69 174 114 HOH HOH . 
D 3 HOH A 70 175 116 HOH HOH . 
D 3 HOH A 71 176 117 HOH HOH . 
D 3 HOH A 72 177 119 HOH HOH . 
D 3 HOH A 73 178 122 HOH HOH . 
D 3 HOH A 74 179 123 HOH HOH . 
D 3 HOH A 75 180 127 HOH HOH . 
D 3 HOH A 76 181 128 HOH HOH . 
D 3 HOH A 77 182 129 HOH HOH . 
D 3 HOH A 78 183 131 HOH HOH . 
D 3 HOH A 79 184 132 HOH HOH . 
D 3 HOH A 80 185 133 HOH HOH . 
D 3 HOH A 81 186 134 HOH HOH . 
D 3 HOH A 82 187 135 HOH HOH . 
D 3 HOH A 83 188 138 HOH HOH . 
D 3 HOH A 84 189 139 HOH HOH . 
D 3 HOH A 85 190 140 HOH HOH . 
D 3 HOH A 86 191 141 HOH HOH . 
D 3 HOH A 87 192 147 HOH HOH . 
D 3 HOH A 88 193 148 HOH HOH . 
D 3 HOH A 89 194 149 HOH HOH . 
D 3 HOH A 90 195 150 HOH HOH . 
D 3 HOH A 91 196 154 HOH HOH . 
D 3 HOH A 92 197 155 HOH HOH . 
D 3 HOH A 93 198 156 HOH HOH . 
D 3 HOH A 94 199 160 HOH HOH . 
D 3 HOH A 95 200 162 HOH HOH . 
D 3 HOH A 96 201 164 HOH HOH . 
D 3 HOH A 97 202 168 HOH HOH . 
D 3 HOH A 98 203 170 HOH HOH . 
D 3 HOH A 99 204 171 HOH HOH . 
D 3 HOH A 100 205 173 HOH HOH . 
D 3 HOH A 101 206 176 HOH HOH . 
D 3 HOH A 102 207 179 HOH HOH . 
D 3 HOH A 103 208 181 HOH HOH . 
D 3 HOH A 104 209 183 HOH HOH . 
D 3 HOH A 105 210 185 HOH HOH . 
D 3 HOH A 106 211 186 HOH HOH . 
D 3 HOH A 107 212 187 HOH HOH . 
D 3 HOH A 108 213 188 HOH HOH . 
D 3 HOH A 109 214 192 HOH HOH . 
D 3 HOH A 110 215 193 HOH HOH . 
D 3 HOH A 111 216 197 HOH HOH . 
D 3 HOH A 112 217 199 HOH HOH . 
D 3 HOH A 113 218 200 HOH HOH . 
D 3 HOH A 114 219 201 HOH HOH . 
E 3 HOH B 1 107 2 HOH HOH . 
E 3 HOH B 2 108 8 HOH HOH . 
E 3 HOH B 3 109 9 HOH HOH . 
E 3 HOH B 4 110 11 HOH HOH . 
E 3 HOH B 5 111 14 HOH HOH . 
E 3 HOH B 6 112 15 HOH HOH . 
E 3 HOH B 7 113 18 HOH HOH . 
E 3 HOH B 8 114 21 HOH HOH . 
E 3 HOH B 9 115 25 HOH HOH . 
E 3 HOH B 10 116 26 HOH HOH . 
E 3 HOH B 11 117 28 HOH HOH . 
E 3 HOH B 12 118 32 HOH HOH . 
E 3 HOH B 13 119 35 HOH HOH . 
E 3 HOH B 14 120 36 HOH HOH . 
E 3 HOH B 15 121 38 HOH HOH . 
E 3 HOH B 16 122 40 HOH HOH . 
E 3 HOH B 17 123 42 HOH HOH . 
E 3 HOH B 18 124 44 HOH HOH . 
E 3 HOH B 19 125 53 HOH HOH . 
E 3 HOH B 20 126 56 HOH HOH . 
E 3 HOH B 21 127 59 HOH HOH . 
E 3 HOH B 22 128 64 HOH HOH . 
E 3 HOH B 23 129 66 HOH HOH . 
E 3 HOH B 24 130 67 HOH HOH . 
E 3 HOH B 25 131 72 HOH HOH . 
E 3 HOH B 26 132 74 HOH HOH . 
E 3 HOH B 27 133 77 HOH HOH . 
E 3 HOH B 28 134 78 HOH HOH . 
E 3 HOH B 29 135 80 HOH HOH . 
E 3 HOH B 30 136 85 HOH HOH . 
E 3 HOH B 31 137 89 HOH HOH . 
E 3 HOH B 32 138 91 HOH HOH . 
E 3 HOH B 33 139 93 HOH HOH . 
E 3 HOH B 34 140 95 HOH HOH . 
E 3 HOH B 35 141 96 HOH HOH . 
E 3 HOH B 36 142 97 HOH HOH . 
E 3 HOH B 37 143 98 HOH HOH . 
E 3 HOH B 38 144 99 HOH HOH . 
E 3 HOH B 39 145 100 HOH HOH . 
E 3 HOH B 40 146 101 HOH HOH . 
E 3 HOH B 41 147 105 HOH HOH . 
E 3 HOH B 42 148 106 HOH HOH . 
E 3 HOH B 43 149 108 HOH HOH . 
E 3 HOH B 44 150 111 HOH HOH . 
E 3 HOH B 45 151 115 HOH HOH . 
E 3 HOH B 46 152 118 HOH HOH . 
E 3 HOH B 47 153 120 HOH HOH . 
E 3 HOH B 48 154 121 HOH HOH . 
E 3 HOH B 49 155 124 HOH HOH . 
E 3 HOH B 50 156 125 HOH HOH . 
E 3 HOH B 51 157 126 HOH HOH . 
E 3 HOH B 52 158 130 HOH HOH . 
E 3 HOH B 53 159 136 HOH HOH . 
E 3 HOH B 54 160 137 HOH HOH . 
E 3 HOH B 55 161 142 HOH HOH . 
E 3 HOH B 56 162 143 HOH HOH . 
E 3 HOH B 57 163 144 HOH HOH . 
E 3 HOH B 58 164 145 HOH HOH . 
E 3 HOH B 59 165 146 HOH HOH . 
E 3 HOH B 60 166 151 HOH HOH . 
E 3 HOH B 61 167 152 HOH HOH . 
E 3 HOH B 62 168 153 HOH HOH . 
E 3 HOH B 63 169 157 HOH HOH . 
E 3 HOH B 64 170 158 HOH HOH . 
E 3 HOH B 65 171 159 HOH HOH . 
E 3 HOH B 66 172 161 HOH HOH . 
E 3 HOH B 67 173 163 HOH HOH . 
E 3 HOH B 68 174 165 HOH HOH . 
E 3 HOH B 69 175 166 HOH HOH . 
E 3 HOH B 70 176 167 HOH HOH . 
E 3 HOH B 71 177 169 HOH HOH . 
E 3 HOH B 72 178 172 HOH HOH . 
E 3 HOH B 73 179 174 HOH HOH . 
E 3 HOH B 74 180 175 HOH HOH . 
E 3 HOH B 75 181 177 HOH HOH . 
E 3 HOH B 76 182 178 HOH HOH . 
E 3 HOH B 77 183 180 HOH HOH . 
E 3 HOH B 78 184 182 HOH HOH . 
E 3 HOH B 79 185 184 HOH HOH . 
E 3 HOH B 80 186 189 HOH HOH . 
E 3 HOH B 81 187 190 HOH HOH . 
E 3 HOH B 82 188 191 HOH HOH . 
E 3 HOH B 83 189 194 HOH HOH . 
E 3 HOH B 84 190 195 HOH HOH . 
E 3 HOH B 85 191 196 HOH HOH . 
E 3 HOH B 86 192 198 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 17.417 30.384 57.994 1 41.27 ? C1 GOL 106 B 1 
HETATM 2 O O1 GOL . . . C 2 16.037 30.686 57.954 1 37.63 ? O1 GOL 106 B 1 
HETATM 3 C C2 GOL . . . C 2 18.046 30.549 56.602 1 40.25 ? C2 GOL 106 B 1 
HETATM 4 O O2 GOL . . . C 2 17.049 30.681 55.613 1 27.07 ? O2 GOL 106 B 1 
HETATM 5 C C3 GOL . . . C 2 19.122 29.507 56.324 1 32.51 ? C3 GOL 106 B 1 
HETATM 6 O O3 GOL . . . C 2 19.529 29.278 54.971 1 19.55 ? O3 GOL 106 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          26 
_model_server_stats.element_count           6 
#