data_2GAX # _model_server_result.job_id JN0CpmRE8Qo8fNxJ3RLqRg _model_server_result.datetime_utc '2025-03-05 03:00:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gax # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4286}' # _entry.id 2GAX # _exptl.entry_id 2GAX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2GAX _cell.length_a 68.965 _cell.length_b 68.998 _cell.length_c 120.811 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GAX _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA,PQS dimeric 2 software_defined_assembly 3 PISA,PQS dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 B,D,F 3 1,2 A,C,E 4 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 68.998 0 3 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 68.965 0 60.4055 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 A MSE 1 1_555 A N PHE 2 A PHE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C LEU 26 A LEU 26 1_555 A N MSE 27 A MSE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C MSE 27 A MSE 27 1_555 A N SER 28 A SER 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C VAL 60 A VAL 60 1_555 A N MSE 61 A MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C MSE 61 A MSE 61 1_555 A N ALA 62 A ALA 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C GLU 88 A GLU 88 1_555 A N MSE 89 A MSE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C MSE 89 A MSE 89 1_555 A N PHE 90 A PHE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 A C GLY 114 A GLY 114 1_555 A N MSE 115 A MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 A C MSE 115 A MSE 115 1_555 A N ALA 116 A ALA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 B C MSE 1 B MSE 1 1_555 B N PHE 2 B PHE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale11 B C LEU 26 B LEU 26 1_555 B N MSE 27 B MSE 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 B C MSE 27 B MSE 27 1_555 B N SER 28 B SER 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 B C VAL 60 B VAL 60 1_555 B N MSE 61 B MSE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale14 B C MSE 61 B MSE 61 1_555 B N ALA 62 B ALA 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C GLU 88 B GLU 88 1_555 B N MSE 89 B MSE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 B C MSE 89 B MSE 89 1_555 B N PHE 90 B PHE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale17 B C GLY 114 B GLY 114 1_555 B N MSE 115 B MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale18 B C MSE 115 B MSE 115 1_555 B N ALA 116 B ALA 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 266 n n P O2 PO4 sing 267 n n P O3 PO4 sing 268 n n P O4 PO4 sing 269 n n # _atom_sites.entry_id 2GAX _atom_sites.fract_transf_matrix[1][1] 0.0145 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 4285 4285 PO4 PO4 . D 2 PO4 B 1 4286 4286 PO4 PO4 . E 3 HOH A 1 4286 2 HOH HOH . E 3 HOH A 2 4287 5 HOH HOH . E 3 HOH A 3 4288 9 HOH HOH . E 3 HOH A 4 4289 11 HOH HOH . E 3 HOH A 5 4290 12 HOH HOH . E 3 HOH A 6 4291 14 HOH HOH . E 3 HOH A 7 4292 16 HOH HOH . E 3 HOH A 8 4293 19 HOH HOH . E 3 HOH A 9 4294 20 HOH HOH . E 3 HOH A 10 4295 21 HOH HOH . E 3 HOH A 11 4296 23 HOH HOH . E 3 HOH A 12 4297 25 HOH HOH . E 3 HOH A 13 4298 26 HOH HOH . E 3 HOH A 14 4299 27 HOH HOH . E 3 HOH A 15 4300 28 HOH HOH . E 3 HOH A 16 4301 29 HOH HOH . E 3 HOH A 17 4302 30 HOH HOH . E 3 HOH A 18 4303 31 HOH HOH . E 3 HOH A 19 4304 35 HOH HOH . E 3 HOH A 20 4305 40 HOH HOH . E 3 HOH A 21 4306 44 HOH HOH . E 3 HOH A 22 4307 49 HOH HOH . E 3 HOH A 23 4308 52 HOH HOH . E 3 HOH A 24 4309 53 HOH HOH . E 3 HOH A 25 4310 55 HOH HOH . E 3 HOH A 26 4311 61 HOH HOH . E 3 HOH A 27 4312 63 HOH HOH . E 3 HOH A 28 4313 68 HOH HOH . E 3 HOH A 29 4314 69 HOH HOH . E 3 HOH A 30 4315 70 HOH HOH . E 3 HOH A 31 4316 71 HOH HOH . E 3 HOH A 32 4317 75 HOH HOH . E 3 HOH A 33 4318 78 HOH HOH . E 3 HOH A 34 4319 79 HOH HOH . E 3 HOH A 35 4320 80 HOH HOH . E 3 HOH A 36 4321 81 HOH HOH . E 3 HOH A 37 4322 82 HOH HOH . E 3 HOH A 38 4323 85 HOH HOH . E 3 HOH A 39 4324 92 HOH HOH . E 3 HOH A 40 4325 93 HOH HOH . E 3 HOH A 41 4326 95 HOH HOH . E 3 HOH A 42 4327 96 HOH HOH . E 3 HOH A 43 4328 97 HOH HOH . E 3 HOH A 44 4329 102 HOH HOH . E 3 HOH A 45 4330 103 HOH HOH . E 3 HOH A 46 4331 106 HOH HOH . E 3 HOH A 47 4332 107 HOH HOH . E 3 HOH A 48 4333 108 HOH HOH . E 3 HOH A 49 4334 111 HOH HOH . E 3 HOH A 50 4335 112 HOH HOH . E 3 HOH A 51 4336 113 HOH HOH . E 3 HOH A 52 4337 117 HOH HOH . E 3 HOH A 53 4338 119 HOH HOH . E 3 HOH A 54 4339 121 HOH HOH . E 3 HOH A 55 4340 122 HOH HOH . E 3 HOH A 56 4341 123 HOH HOH . E 3 HOH A 57 4342 125 HOH HOH . E 3 HOH A 58 4343 126 HOH HOH . E 3 HOH A 59 4344 127 HOH HOH . E 3 HOH A 60 4345 128 HOH HOH . E 3 HOH A 61 4346 130 HOH HOH . E 3 HOH A 62 4347 131 HOH HOH . E 3 HOH A 63 4348 134 HOH HOH . E 3 HOH A 64 4349 136 HOH HOH . E 3 HOH A 65 4350 137 HOH HOH . E 3 HOH A 66 4351 139 HOH HOH . E 3 HOH A 67 4352 140 HOH HOH . E 3 HOH A 68 4353 141 HOH HOH . E 3 HOH A 69 4354 145 HOH HOH . E 3 HOH A 70 4355 146 HOH HOH . E 3 HOH A 71 4356 147 HOH HOH . E 3 HOH A 72 4357 149 HOH HOH . E 3 HOH A 73 4358 152 HOH HOH . E 3 HOH A 74 4359 154 HOH HOH . E 3 HOH A 75 4360 158 HOH HOH . E 3 HOH A 76 4361 160 HOH HOH . E 3 HOH A 77 4362 164 HOH HOH . E 3 HOH A 78 4363 165 HOH HOH . E 3 HOH A 79 4364 167 HOH HOH . E 3 HOH A 80 4365 169 HOH HOH . E 3 HOH A 81 4366 170 HOH HOH . E 3 HOH A 82 4367 171 HOH HOH . E 3 HOH A 83 4368 180 HOH HOH . E 3 HOH A 84 4369 181 HOH HOH . E 3 HOH A 85 4370 187 HOH HOH . E 3 HOH A 86 4371 189 HOH HOH . E 3 HOH A 87 4372 191 HOH HOH . E 3 HOH A 88 4373 193 HOH HOH . E 3 HOH A 89 4374 194 HOH HOH . E 3 HOH A 90 4375 195 HOH HOH . E 3 HOH A 91 4376 201 HOH HOH . E 3 HOH A 92 4377 202 HOH HOH . E 3 HOH A 93 4378 204 HOH HOH . E 3 HOH A 94 4379 207 HOH HOH . E 3 HOH A 95 4380 209 HOH HOH . E 3 HOH A 96 4381 210 HOH HOH . E 3 HOH A 97 4382 213 HOH HOH . E 3 HOH A 98 4383 215 HOH HOH . E 3 HOH A 99 4384 219 HOH HOH . E 3 HOH A 100 4385 220 HOH HOH . E 3 HOH A 101 4386 221 HOH HOH . E 3 HOH A 102 4387 223 HOH HOH . E 3 HOH A 103 4388 226 HOH HOH . E 3 HOH A 104 4389 227 HOH HOH . E 3 HOH A 105 4390 228 HOH HOH . E 3 HOH A 106 4391 229 HOH HOH . E 3 HOH A 107 4392 230 HOH HOH . E 3 HOH A 108 4393 232 HOH HOH . E 3 HOH A 109 4394 234 HOH HOH . E 3 HOH A 110 4395 237 HOH HOH . E 3 HOH A 111 4396 239 HOH HOH . E 3 HOH A 112 4397 240 HOH HOH . F 3 HOH B 1 4287 1 HOH HOH . F 3 HOH B 2 4288 3 HOH HOH . F 3 HOH B 3 4289 6 HOH HOH . F 3 HOH B 4 4290 8 HOH HOH . F 3 HOH B 5 4291 13 HOH HOH . F 3 HOH B 6 4292 15 HOH HOH . F 3 HOH B 7 4293 17 HOH HOH . F 3 HOH B 8 4294 18 HOH HOH . F 3 HOH B 9 4295 22 HOH HOH . F 3 HOH B 10 4296 32 HOH HOH . F 3 HOH B 11 4297 33 HOH HOH . F 3 HOH B 12 4298 34 HOH HOH . F 3 HOH B 13 4299 36 HOH HOH . F 3 HOH B 14 4300 37 HOH HOH . F 3 HOH B 15 4301 38 HOH HOH . F 3 HOH B 16 4302 39 HOH HOH . F 3 HOH B 17 4303 41 HOH HOH . F 3 HOH B 18 4304 42 HOH HOH . F 3 HOH B 19 4305 43 HOH HOH . F 3 HOH B 20 4306 45 HOH HOH . F 3 HOH B 21 4307 46 HOH HOH . F 3 HOH B 22 4308 47 HOH HOH . F 3 HOH B 23 4309 48 HOH HOH . F 3 HOH B 24 4310 50 HOH HOH . F 3 HOH B 25 4311 54 HOH HOH . F 3 HOH B 26 4312 56 HOH HOH . F 3 HOH B 27 4313 57 HOH HOH . F 3 HOH B 28 4314 58 HOH HOH . F 3 HOH B 29 4315 59 HOH HOH . F 3 HOH B 30 4316 60 HOH HOH . F 3 HOH B 31 4317 62 HOH HOH . F 3 HOH B 32 4318 64 HOH HOH . F 3 HOH B 33 4319 65 HOH HOH . F 3 HOH B 34 4320 66 HOH HOH . F 3 HOH B 35 4321 67 HOH HOH . F 3 HOH B 36 4322 72 HOH HOH . F 3 HOH B 37 4323 73 HOH HOH . F 3 HOH B 38 4324 74 HOH HOH . F 3 HOH B 39 4325 76 HOH HOH . F 3 HOH B 40 4326 77 HOH HOH . F 3 HOH B 41 4327 83 HOH HOH . F 3 HOH B 42 4328 84 HOH HOH . F 3 HOH B 43 4329 86 HOH HOH . F 3 HOH B 44 4330 87 HOH HOH . F 3 HOH B 45 4331 88 HOH HOH . F 3 HOH B 46 4332 89 HOH HOH . F 3 HOH B 47 4333 90 HOH HOH . F 3 HOH B 48 4334 91 HOH HOH . F 3 HOH B 49 4335 94 HOH HOH . F 3 HOH B 50 4336 98 HOH HOH . F 3 HOH B 51 4337 99 HOH HOH . F 3 HOH B 52 4338 100 HOH HOH . F 3 HOH B 53 4339 101 HOH HOH . F 3 HOH B 54 4340 104 HOH HOH . F 3 HOH B 55 4341 105 HOH HOH . F 3 HOH B 56 4342 109 HOH HOH . F 3 HOH B 57 4343 110 HOH HOH . F 3 HOH B 58 4344 114 HOH HOH . F 3 HOH B 59 4345 116 HOH HOH . F 3 HOH B 60 4346 118 HOH HOH . F 3 HOH B 61 4347 120 HOH HOH . F 3 HOH B 62 4348 124 HOH HOH . F 3 HOH B 63 4349 129 HOH HOH . F 3 HOH B 64 4350 132 HOH HOH . F 3 HOH B 65 4351 133 HOH HOH . F 3 HOH B 66 4352 135 HOH HOH . F 3 HOH B 67 4353 138 HOH HOH . F 3 HOH B 68 4354 142 HOH HOH . F 3 HOH B 69 4355 143 HOH HOH . F 3 HOH B 70 4356 144 HOH HOH . F 3 HOH B 71 4357 148 HOH HOH . F 3 HOH B 72 4358 150 HOH HOH . F 3 HOH B 73 4359 151 HOH HOH . F 3 HOH B 74 4360 153 HOH HOH . F 3 HOH B 75 4361 155 HOH HOH . F 3 HOH B 76 4362 156 HOH HOH . F 3 HOH B 77 4363 157 HOH HOH . F 3 HOH B 78 4364 159 HOH HOH . F 3 HOH B 79 4365 161 HOH HOH . F 3 HOH B 80 4366 162 HOH HOH . F 3 HOH B 81 4367 163 HOH HOH . F 3 HOH B 82 4368 166 HOH HOH . F 3 HOH B 83 4369 168 HOH HOH . F 3 HOH B 84 4370 173 HOH HOH . F 3 HOH B 85 4371 174 HOH HOH . F 3 HOH B 86 4372 175 HOH HOH . F 3 HOH B 87 4373 176 HOH HOH . F 3 HOH B 88 4374 177 HOH HOH . F 3 HOH B 89 4375 178 HOH HOH . F 3 HOH B 90 4376 186 HOH HOH . F 3 HOH B 91 4377 196 HOH HOH . F 3 HOH B 92 4378 197 HOH HOH . F 3 HOH B 93 4379 198 HOH HOH . F 3 HOH B 94 4380 199 HOH HOH . F 3 HOH B 95 4381 203 HOH HOH . F 3 HOH B 96 4382 205 HOH HOH . F 3 HOH B 97 4383 206 HOH HOH . F 3 HOH B 98 4384 208 HOH HOH . F 3 HOH B 99 4385 211 HOH HOH . F 3 HOH B 100 4386 212 HOH HOH . F 3 HOH B 101 4387 214 HOH HOH . F 3 HOH B 102 4388 216 HOH HOH . F 3 HOH B 103 4389 217 HOH HOH . F 3 HOH B 104 4390 218 HOH HOH . F 3 HOH B 105 4391 222 HOH HOH . F 3 HOH B 106 4392 224 HOH HOH . F 3 HOH B 107 4393 225 HOH HOH . F 3 HOH B 108 4394 231 HOH HOH . F 3 HOH B 109 4395 233 HOH HOH . F 3 HOH B 110 4396 235 HOH HOH . F 3 HOH B 111 4397 236 HOH HOH . F 3 HOH B 112 4398 238 HOH HOH . F 3 HOH B 113 4399 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 23.579 18.889 -5.087 1 58.85 ? P PO4 4286 B 1 HETATM 2 O O1 PO4 . . . D 2 24.307 18.214 -3.947 1 59.23 ? O1 PO4 4286 B 1 HETATM 3 O O2 PO4 . . . D 2 24.279 20.175 -5.454 1 58.87 ? O2 PO4 4286 B 1 HETATM 4 O O3 PO4 . . . D 2 23.573 17.954 -6.275 1 58.82 ? O3 PO4 4286 B 1 HETATM 5 O O4 PO4 . . . D 2 22.163 19.176 -4.691 1 58.65 ? O4 PO4 4286 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #