data_2GCY # _model_server_result.job_id lGW71OzxTo2HMv6MTAbBnQ _model_server_result.datetime_utc '2024-11-05 21:03:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gcy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 2GCY # _exptl.entry_id 2GCY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2GCY _cell.length_a 90.26 _cell.length_b 90.26 _cell.length_c 217.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GCY _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+5/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -45.13 78.167453 181.083333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf2 A SG CYS 138 A CYS 138 1_555 A SG CYS 198 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf4 B SG CYS 145 B CYS 145 1_555 B SG CYS 201 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 2GCY _atom_sites.fract_transf_matrix[1][1] 0.011079 _atom_sites.fract_transf_matrix[1][2] 0.006397 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 301 1 SO4 SO4 . D 3 SO4 A 1 302 2 SO4 SO4 . E 3 SO4 A 1 303 3 SO4 SO4 . F 3 SO4 B 1 304 4 SO4 SO4 . G 4 HOH A 1 304 4 HOH TIP . G 4 HOH A 2 305 5 HOH TIP . G 4 HOH A 3 306 6 HOH TIP . G 4 HOH A 4 307 7 HOH TIP . G 4 HOH A 5 308 8 HOH TIP . G 4 HOH A 6 309 10 HOH TIP . G 4 HOH A 7 310 11 HOH TIP . G 4 HOH A 8 311 12 HOH TIP . G 4 HOH A 9 312 14 HOH TIP . G 4 HOH A 10 313 15 HOH TIP . G 4 HOH A 11 314 16 HOH TIP . G 4 HOH A 12 315 18 HOH TIP . G 4 HOH A 13 316 22 HOH TIP . G 4 HOH A 14 317 23 HOH TIP . G 4 HOH A 15 318 25 HOH TIP . G 4 HOH A 16 319 27 HOH TIP . G 4 HOH A 17 320 28 HOH TIP . G 4 HOH A 18 321 33 HOH TIP . G 4 HOH A 19 322 34 HOH TIP . G 4 HOH A 20 323 35 HOH TIP . G 4 HOH A 21 324 40 HOH TIP . G 4 HOH A 22 325 41 HOH TIP . G 4 HOH A 23 326 43 HOH TIP . G 4 HOH A 24 327 44 HOH TIP . G 4 HOH A 25 328 46 HOH TIP . G 4 HOH A 26 329 52 HOH TIP . G 4 HOH A 27 330 56 HOH TIP . G 4 HOH A 28 331 57 HOH TIP . G 4 HOH A 29 332 58 HOH TIP . G 4 HOH A 30 333 60 HOH TIP . G 4 HOH A 31 334 63 HOH TIP . G 4 HOH A 32 335 68 HOH TIP . G 4 HOH A 33 336 69 HOH TIP . G 4 HOH A 34 337 71 HOH TIP . G 4 HOH A 35 338 73 HOH TIP . G 4 HOH A 36 339 74 HOH TIP . G 4 HOH A 37 340 80 HOH TIP . G 4 HOH A 38 341 82 HOH TIP . G 4 HOH A 39 342 83 HOH TIP . G 4 HOH A 40 343 85 HOH TIP . G 4 HOH A 41 344 91 HOH TIP . G 4 HOH A 42 345 92 HOH TIP . G 4 HOH A 43 346 93 HOH TIP . G 4 HOH A 44 347 95 HOH TIP . G 4 HOH A 45 348 96 HOH TIP . G 4 HOH A 46 349 99 HOH TIP . G 4 HOH A 47 350 102 HOH TIP . G 4 HOH A 48 351 106 HOH TIP . G 4 HOH A 49 352 108 HOH TIP . G 4 HOH A 50 353 109 HOH TIP . G 4 HOH A 51 354 110 HOH TIP . G 4 HOH A 52 355 111 HOH TIP . G 4 HOH A 53 356 112 HOH TIP . G 4 HOH A 54 357 114 HOH TIP . G 4 HOH A 55 358 115 HOH TIP . G 4 HOH A 56 359 116 HOH TIP . H 4 HOH B 1 305 1 HOH TIP . H 4 HOH B 2 306 9 HOH TIP . H 4 HOH B 3 307 13 HOH TIP . H 4 HOH B 4 308 17 HOH TIP . H 4 HOH B 5 309 19 HOH TIP . H 4 HOH B 6 310 20 HOH TIP . H 4 HOH B 7 311 21 HOH TIP . H 4 HOH B 8 312 24 HOH TIP . H 4 HOH B 9 313 26 HOH TIP . H 4 HOH B 10 314 29 HOH TIP . H 4 HOH B 11 315 30 HOH TIP . H 4 HOH B 12 316 31 HOH TIP . H 4 HOH B 13 317 32 HOH TIP . H 4 HOH B 14 318 36 HOH TIP . H 4 HOH B 15 319 37 HOH TIP . H 4 HOH B 16 320 38 HOH TIP . H 4 HOH B 17 321 39 HOH TIP . H 4 HOH B 18 322 42 HOH TIP . H 4 HOH B 19 323 45 HOH TIP . H 4 HOH B 20 324 47 HOH TIP . H 4 HOH B 21 325 48 HOH TIP . H 4 HOH B 22 326 49 HOH TIP . H 4 HOH B 23 327 50 HOH TIP . H 4 HOH B 24 328 51 HOH TIP . H 4 HOH B 25 329 53 HOH TIP . H 4 HOH B 26 330 59 HOH TIP . H 4 HOH B 27 331 61 HOH TIP . H 4 HOH B 28 332 62 HOH TIP . H 4 HOH B 29 333 64 HOH TIP . H 4 HOH B 30 334 65 HOH TIP . H 4 HOH B 31 335 66 HOH TIP . H 4 HOH B 32 336 67 HOH TIP . H 4 HOH B 33 337 70 HOH TIP . H 4 HOH B 34 338 72 HOH TIP . H 4 HOH B 35 339 75 HOH TIP . H 4 HOH B 36 340 76 HOH TIP . H 4 HOH B 37 341 77 HOH TIP . H 4 HOH B 38 342 78 HOH TIP . H 4 HOH B 39 343 79 HOH TIP . H 4 HOH B 40 344 81 HOH TIP . H 4 HOH B 41 345 84 HOH TIP . H 4 HOH B 42 346 86 HOH TIP . H 4 HOH B 43 347 87 HOH TIP . H 4 HOH B 44 348 88 HOH TIP . H 4 HOH B 45 349 89 HOH TIP . H 4 HOH B 46 350 90 HOH TIP . H 4 HOH B 47 351 94 HOH TIP . H 4 HOH B 48 352 97 HOH TIP . H 4 HOH B 49 353 98 HOH TIP . H 4 HOH B 50 354 100 HOH TIP . H 4 HOH B 51 355 101 HOH TIP . H 4 HOH B 52 356 103 HOH TIP . H 4 HOH B 53 357 104 HOH TIP . H 4 HOH B 54 358 113 HOH TIP . H 4 HOH B 55 359 117 HOH TIP . H 4 HOH B 56 360 202 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 25.955 69.686 93.116 1 86.25 ? S SO4 302 A 1 HETATM 2 O O1 SO4 . . . D 3 26.285 69.679 91.675 1 86.26 ? O1 SO4 302 A 1 HETATM 3 O O2 SO4 . . . D 3 26.324 68.381 93.698 1 86.66 ? O2 SO4 302 A 1 HETATM 4 O O3 SO4 . . . D 3 24.507 69.9 93.297 1 86.46 ? O3 SO4 302 A 1 HETATM 5 O O4 SO4 . . . D 3 26.702 70.761 93.796 1 84.57 ? O4 SO4 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #