data_2GG8 # _model_server_result.job_id JfS2R8lzJ1x-bvBq7ZJrSg _model_server_result.datetime_utc '2025-01-02 18:08:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gg8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 2GG8 # _exptl.entry_id 2GG8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.47 _cell.angle_gamma 90 _cell.entry_id 2GG8 _cell.length_a 38.701 _cell.length_b 62.017 _cell.length_c 53.255 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GG8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASN 73 A ASN 74 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc2 A O VAL 75 A VAL 76 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc3 A OD1 ASP 96 A ASP 97 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc4 A OD2 ASP 96 A ASP 97 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc5 A OD1 ASP 107 A ASP 108 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc6 A OD2 ASP 107 A ASP 108 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc7 A NE2 HIS 170 A HIS 171 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc8 A OE2 GLU 203 A GLU 204 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc9 A O SER 230 A SER 231 1_555 D NA NA . A NA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc10 A OE1 GLU 234 A GLU 235 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc11 A OE2 GLU 234 A GLU 235 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc12 B CO CO . A CO 301 1_555 E O22 U15 . A U15 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc13 B CO CO . A CO 301 1_555 E O19 U15 . A U15 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc14 C CO CO . A CO 302 1_555 E N15 U15 . A U15 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc15 C CO CO . A CO 302 1_555 E O19 U15 . A U15 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc16 D NA NA . A NA 503 1_555 F O HOH . A HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2GG8 _atom_sites.fract_transf_matrix[1][1] 0.025839 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008132 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016125 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019686 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 301 301 CO CO . C 2 CO A 1 302 302 CO CO . D 3 NA A 1 503 503 NA NA . E 4 U15 A 1 501 501 U15 U15 . F 5 HOH A 1 504 1 HOH HOH . F 5 HOH A 2 505 2 HOH HOH . F 5 HOH A 3 506 3 HOH HOH . F 5 HOH A 4 507 4 HOH HOH . F 5 HOH A 5 508 5 HOH HOH . F 5 HOH A 6 509 11 HOH HOH . F 5 HOH A 7 510 12 HOH HOH . F 5 HOH A 8 511 17 HOH HOH . F 5 HOH A 9 512 18 HOH HOH . F 5 HOH A 10 513 21 HOH HOH . F 5 HOH A 11 514 23 HOH HOH . F 5 HOH A 12 515 26 HOH HOH . F 5 HOH A 13 516 27 HOH HOH . F 5 HOH A 14 517 29 HOH HOH . F 5 HOH A 15 518 31 HOH HOH . F 5 HOH A 16 519 34 HOH HOH . F 5 HOH A 17 520 35 HOH HOH . F 5 HOH A 18 521 36 HOH HOH . F 5 HOH A 19 522 54 HOH HOH . F 5 HOH A 20 523 57 HOH HOH . F 5 HOH A 21 524 79 HOH HOH . F 5 HOH A 22 525 86 HOH HOH . F 5 HOH A 23 526 91 HOH HOH . F 5 HOH A 24 527 97 HOH HOH . F 5 HOH A 25 528 99 HOH HOH . F 5 HOH A 26 529 100 HOH HOH . F 5 HOH A 27 530 106 HOH HOH . F 5 HOH A 28 531 110 HOH HOH . F 5 HOH A 29 532 124 HOH HOH . F 5 HOH A 30 533 125 HOH HOH . F 5 HOH A 31 534 137 HOH HOH . F 5 HOH A 32 535 190 HOH HOH . F 5 HOH A 33 536 192 HOH HOH . F 5 HOH A 34 537 193 HOH HOH . F 5 HOH A 35 538 195 HOH HOH . F 5 HOH A 36 539 218 HOH HOH . F 5 HOH A 37 540 224 HOH HOH . F 5 HOH A 38 541 225 HOH HOH . F 5 HOH A 39 542 228 HOH HOH . F 5 HOH A 40 543 232 HOH HOH . F 5 HOH A 41 544 233 HOH HOH . F 5 HOH A 42 545 236 HOH HOH . F 5 HOH A 43 546 254 HOH HOH . F 5 HOH A 44 547 255 HOH HOH . F 5 HOH A 45 548 267 HOH HOH . F 5 HOH A 46 549 273 HOH HOH . F 5 HOH A 47 550 277 HOH HOH . F 5 HOH A 48 551 291 HOH HOH . F 5 HOH A 49 552 361 HOH HOH . F 5 HOH A 50 553 371 HOH HOH . F 5 HOH A 51 554 372 HOH HOH . F 5 HOH A 52 555 373 HOH HOH . F 5 HOH A 53 556 374 HOH HOH . F 5 HOH A 54 557 375 HOH HOH . F 5 HOH A 55 558 376 HOH HOH . F 5 HOH A 56 559 377 HOH HOH . F 5 HOH A 57 560 378 HOH HOH . F 5 HOH A 58 561 379 HOH HOH . F 5 HOH A 59 562 380 HOH HOH . F 5 HOH A 60 563 381 HOH HOH . F 5 HOH A 61 564 382 HOH HOH . F 5 HOH A 62 565 383 HOH HOH . F 5 HOH A 63 566 384 HOH HOH . F 5 HOH A 64 567 385 HOH HOH . F 5 HOH A 65 568 386 HOH HOH . F 5 HOH A 66 569 387 HOH HOH . F 5 HOH A 67 570 388 HOH HOH . F 5 HOH A 68 571 389 HOH HOH . F 5 HOH A 69 572 390 HOH HOH . F 5 HOH A 70 573 391 HOH HOH . F 5 HOH A 71 574 392 HOH HOH . F 5 HOH A 72 575 393 HOH HOH . F 5 HOH A 73 576 394 HOH HOH . F 5 HOH A 74 577 395 HOH HOH . F 5 HOH A 75 578 396 HOH HOH . F 5 HOH A 76 579 397 HOH HOH . F 5 HOH A 77 580 398 HOH HOH . F 5 HOH A 78 581 399 HOH HOH . F 5 HOH A 79 582 400 HOH HOH . F 5 HOH A 80 583 401 HOH HOH . F 5 HOH A 81 584 402 HOH HOH . F 5 HOH A 82 585 403 HOH HOH . F 5 HOH A 83 586 404 HOH HOH . F 5 HOH A 84 587 405 HOH HOH . F 5 HOH A 85 588 406 HOH HOH . F 5 HOH A 86 589 407 HOH HOH . F 5 HOH A 87 590 408 HOH HOH . F 5 HOH A 88 591 409 HOH HOH . F 5 HOH A 89 592 410 HOH HOH . F 5 HOH A 90 593 411 HOH HOH . F 5 HOH A 91 594 412 HOH HOH . F 5 HOH A 92 595 413 HOH HOH . F 5 HOH A 93 596 414 HOH HOH . F 5 HOH A 94 597 415 HOH HOH . F 5 HOH A 95 598 416 HOH HOH . F 5 HOH A 96 599 417 HOH HOH . F 5 HOH A 97 600 418 HOH HOH . F 5 HOH A 98 601 419 HOH HOH . F 5 HOH A 99 602 420 HOH HOH . F 5 HOH A 100 603 421 HOH HOH . F 5 HOH A 101 604 422 HOH HOH . F 5 HOH A 102 605 423 HOH HOH . F 5 HOH A 103 606 424 HOH HOH . F 5 HOH A 104 607 425 HOH HOH . F 5 HOH A 105 608 426 HOH HOH . F 5 HOH A 106 609 427 HOH HOH . F 5 HOH A 107 610 428 HOH HOH . F 5 HOH A 108 611 429 HOH HOH . F 5 HOH A 109 612 430 HOH HOH . F 5 HOH A 110 613 431 HOH HOH . F 5 HOH A 111 614 432 HOH HOH . F 5 HOH A 112 615 433 HOH HOH . F 5 HOH A 113 616 434 HOH HOH . F 5 HOH A 114 617 435 HOH HOH . F 5 HOH A 115 618 437 HOH HOH . F 5 HOH A 116 619 438 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.366 _atom_site.Cartn_y 0.69 _atom_site.Cartn_z 7.696 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #