data_2GHK
#
_model_server_result.job_id            uM2ahzhSbzSn017XMLIfQQ 
_model_server_result.datetime_utc      '2025-01-11 22:03:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ghk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":9252}' 
#
_entry.id    2GHK 
#
_exptl.entry_id    2GHK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              26.017 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CYANIDE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GHK 
_cell.length_a            80.874 
_cell.length_b            80.874 
_cell.length_c            75.252 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GHK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 174 X HIS 163 1_555 D FE HEM . X HEM 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc2 A OG1 THR 175 X THR 164 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.166 ? 
metalc ? metalc3 A O THR 175 X THR 164 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? 
metalc ? metalc4 A OG1 THR 191 X THR 180 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.987 ? 
metalc ? metalc5 A O ASN 193 X ASN 182 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? 
metalc ? metalc6 A ND2 ASN 193 X ASN 182 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? 
metalc ? metalc7 A O ILE 196 X ILE 185 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? 
metalc ? metalc8 A OD1 ASP 198 X ASP 187 1_555 B K K . X K 9270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? 
metalc ? metalc9 D FE HEM . X HEM 251 1_555 C C CYN . X CYN 9252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
#
_chem_comp.formula           'C N -1' 
_chem_comp.formula_weight    26.017 
_chem_comp.id                CYN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CYANIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_chem_comp_bond.atom_id_1             C 
_chem_comp_bond.atom_id_2             N 
_chem_comp_bond.comp_id               CYN 
_chem_comp_bond.value_order           trip 
_chem_comp_bond.pdbx_ordinal          70 
_chem_comp_bond.pdbx_stereo_config    n 
_chem_comp_bond.pdbx_aromatic_flag    n 
#
_atom_sites.entry_id                     2GHK 
_atom_sites.fract_transf_matrix[1][1]    0.012365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013289 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 K X 1 9270 9270 K K . 
C 3 CYN X 1 9252 9252 CYN CN . 
D 4 HEM X 1 251 251 HEM HEM . 
E 5 HOH X 1 9271 9001 HOH HOH . 
E 5 HOH X 2 9272 9002 HOH HOH . 
E 5 HOH X 3 9273 9003 HOH HOH . 
E 5 HOH X 4 9274 9005 HOH HOH . 
E 5 HOH X 5 9275 9006 HOH HOH . 
E 5 HOH X 6 9276 9007 HOH HOH . 
E 5 HOH X 7 9277 9008 HOH HOH . 
E 5 HOH X 8 9278 9009 HOH HOH . 
E 5 HOH X 9 9279 9010 HOH HOH . 
E 5 HOH X 10 9280 9011 HOH HOH . 
E 5 HOH X 11 9281 9012 HOH HOH . 
E 5 HOH X 12 9282 9013 HOH HOH . 
E 5 HOH X 13 9283 9014 HOH HOH . 
E 5 HOH X 14 9284 9015 HOH HOH . 
E 5 HOH X 15 9285 9019 HOH HOH . 
E 5 HOH X 16 9286 9020 HOH HOH . 
E 5 HOH X 17 9287 9021 HOH HOH . 
E 5 HOH X 18 9288 9022 HOH HOH . 
E 5 HOH X 19 9289 9023 HOH HOH . 
E 5 HOH X 20 9290 9024 HOH HOH . 
E 5 HOH X 21 9291 9027 HOH HOH . 
E 5 HOH X 22 9292 9028 HOH HOH . 
E 5 HOH X 23 9293 9029 HOH HOH . 
E 5 HOH X 24 9294 9030 HOH HOH . 
E 5 HOH X 25 9295 9032 HOH HOH . 
E 5 HOH X 26 9296 1 HOH HOH . 
E 5 HOH X 27 9297 2 HOH HOH . 
E 5 HOH X 28 9298 3 HOH HOH . 
E 5 HOH X 29 9299 4 HOH HOH . 
E 5 HOH X 30 9300 5 HOH HOH . 
E 5 HOH X 31 9301 6 HOH HOH . 
E 5 HOH X 32 9302 7 HOH HOH . 
E 5 HOH X 33 9303 8 HOH HOH . 
E 5 HOH X 34 9304 9 HOH HOH . 
E 5 HOH X 35 9305 10 HOH HOH . 
E 5 HOH X 36 9306 11 HOH HOH . 
E 5 HOH X 37 9307 12 HOH HOH . 
E 5 HOH X 38 9308 13 HOH HOH . 
E 5 HOH X 39 9309 14 HOH HOH . 
E 5 HOH X 40 9310 15 HOH HOH . 
E 5 HOH X 41 9311 16 HOH HOH . 
E 5 HOH X 42 9312 17 HOH HOH . 
E 5 HOH X 43 9313 18 HOH HOH . 
E 5 HOH X 44 9314 19 HOH HOH . 
E 5 HOH X 45 9315 20 HOH HOH . 
E 5 HOH X 46 9316 21 HOH HOH . 
E 5 HOH X 47 9317 22 HOH HOH . 
E 5 HOH X 48 9318 23 HOH HOH . 
E 5 HOH X 49 9319 24 HOH HOH . 
E 5 HOH X 50 9320 25 HOH HOH . 
E 5 HOH X 51 9321 26 HOH HOH . 
E 5 HOH X 52 9322 27 HOH HOH . 
E 5 HOH X 53 9323 28 HOH HOH . 
E 5 HOH X 54 9324 29 HOH HOH . 
E 5 HOH X 55 9325 30 HOH HOH . 
E 5 HOH X 56 9326 31 HOH HOH . 
E 5 HOH X 57 9327 32 HOH HOH . 
E 5 HOH X 58 9328 33 HOH HOH . 
E 5 HOH X 59 9329 34 HOH HOH . 
E 5 HOH X 60 9330 35 HOH HOH . 
E 5 HOH X 61 9331 36 HOH HOH . 
E 5 HOH X 62 9332 37 HOH HOH . 
E 5 HOH X 63 9333 38 HOH HOH . 
E 5 HOH X 64 9334 39 HOH HOH . 
E 5 HOH X 65 9335 40 HOH HOH . 
E 5 HOH X 66 9336 41 HOH HOH . 
E 5 HOH X 67 9337 42 HOH HOH . 
E 5 HOH X 68 9338 43 HOH HOH . 
E 5 HOH X 69 9339 44 HOH HOH . 
E 5 HOH X 70 9340 45 HOH HOH . 
E 5 HOH X 71 9341 46 HOH HOH . 
E 5 HOH X 72 9342 47 HOH HOH . 
E 5 HOH X 73 9343 48 HOH HOH . 
E 5 HOH X 74 9344 49 HOH HOH . 
E 5 HOH X 75 9345 50 HOH HOH . 
E 5 HOH X 76 9346 51 HOH HOH . 
E 5 HOH X 77 9347 52 HOH HOH . 
E 5 HOH X 78 9348 53 HOH HOH . 
E 5 HOH X 79 9349 54 HOH HOH . 
E 5 HOH X 80 9350 55 HOH HOH . 
E 5 HOH X 81 9351 56 HOH HOH . 
E 5 HOH X 82 9352 57 HOH HOH . 
E 5 HOH X 83 9353 58 HOH HOH . 
E 5 HOH X 84 9354 59 HOH HOH . 
E 5 HOH X 85 9355 60 HOH HOH . 
E 5 HOH X 86 9356 61 HOH HOH . 
E 5 HOH X 87 9357 62 HOH HOH . 
E 5 HOH X 88 9358 63 HOH HOH . 
E 5 HOH X 89 9359 64 HOH HOH . 
E 5 HOH X 90 9360 65 HOH HOH . 
E 5 HOH X 91 9361 66 HOH HOH . 
E 5 HOH X 92 9362 67 HOH HOH . 
E 5 HOH X 93 9363 68 HOH HOH . 
E 5 HOH X 94 9364 69 HOH HOH . 
E 5 HOH X 95 9365 70 HOH HOH . 
E 5 HOH X 96 9366 71 HOH HOH . 
E 5 HOH X 97 9367 72 HOH HOH . 
E 5 HOH X 98 9368 73 HOH HOH . 
E 5 HOH X 99 9369 74 HOH HOH . 
E 5 HOH X 100 9370 75 HOH HOH . 
E 5 HOH X 101 9371 76 HOH HOH . 
E 5 HOH X 102 9372 77 HOH HOH . 
E 5 HOH X 103 9373 78 HOH HOH . 
E 5 HOH X 104 9374 79 HOH HOH . 
E 5 HOH X 105 9375 80 HOH HOH . 
E 5 HOH X 106 9376 81 HOH HOH . 
E 5 HOH X 107 9377 82 HOH HOH . 
E 5 HOH X 108 9378 83 HOH HOH . 
E 5 HOH X 109 9379 84 HOH HOH . 
E 5 HOH X 110 9380 85 HOH HOH . 
E 5 HOH X 111 9381 86 HOH HOH . 
E 5 HOH X 112 9382 87 HOH HOH . 
E 5 HOH X 113 9383 88 HOH HOH . 
E 5 HOH X 114 9384 89 HOH HOH . 
E 5 HOH X 115 9385 90 HOH HOH . 
E 5 HOH X 116 9386 91 HOH HOH . 
E 5 HOH X 117 9387 92 HOH HOH . 
E 5 HOH X 118 9388 93 HOH HOH . 
E 5 HOH X 119 9389 94 HOH HOH . 
E 5 HOH X 120 9390 95 HOH HOH . 
E 5 HOH X 121 9391 96 HOH HOH . 
E 5 HOH X 122 9392 97 HOH HOH . 
E 5 HOH X 123 9393 98 HOH HOH . 
E 5 HOH X 124 9394 99 HOH HOH . 
E 5 HOH X 125 9395 100 HOH HOH . 
E 5 HOH X 126 9396 101 HOH HOH . 
E 5 HOH X 127 9397 102 HOH HOH . 
E 5 HOH X 128 9398 103 HOH HOH . 
E 5 HOH X 129 9399 104 HOH HOH . 
E 5 HOH X 130 9400 105 HOH HOH . 
E 5 HOH X 131 9401 106 HOH HOH . 
E 5 HOH X 132 9402 107 HOH HOH . 
E 5 HOH X 133 9403 108 HOH HOH . 
E 5 HOH X 134 9404 109 HOH HOH . 
E 5 HOH X 135 9405 110 HOH HOH . 
E 5 HOH X 136 9406 111 HOH HOH . 
E 5 HOH X 137 9407 112 HOH HOH . 
E 5 HOH X 138 9408 113 HOH HOH . 
E 5 HOH X 139 9409 114 HOH HOH . 
E 5 HOH X 140 9410 115 HOH HOH . 
E 5 HOH X 141 9411 116 HOH HOH . 
E 5 HOH X 142 9412 117 HOH HOH . 
E 5 HOH X 143 9413 118 HOH HOH . 
E 5 HOH X 144 9414 119 HOH HOH . 
E 5 HOH X 145 9415 120 HOH HOH . 
E 5 HOH X 146 9416 121 HOH HOH . 
E 5 HOH X 147 9417 122 HOH HOH . 
E 5 HOH X 148 9418 123 HOH HOH . 
E 5 HOH X 149 9419 124 HOH HOH . 
E 5 HOH X 150 9420 125 HOH HOH . 
E 5 HOH X 151 9421 126 HOH HOH . 
E 5 HOH X 152 9422 127 HOH HOH . 
E 5 HOH X 153 9423 128 HOH HOH . 
E 5 HOH X 154 9424 129 HOH HOH . 
E 5 HOH X 155 9425 130 HOH HOH . 
E 5 HOH X 156 9426 131 HOH HOH . 
E 5 HOH X 157 9427 132 HOH HOH . 
E 5 HOH X 158 9428 133 HOH HOH . 
E 5 HOH X 159 9429 134 HOH HOH . 
E 5 HOH X 160 9430 135 HOH HOH . 
E 5 HOH X 161 9431 136 HOH HOH . 
E 5 HOH X 162 9432 137 HOH HOH . 
E 5 HOH X 163 9433 138 HOH HOH . 
E 5 HOH X 164 9434 139 HOH HOH . 
E 5 HOH X 165 9435 140 HOH HOH . 
E 5 HOH X 166 9436 141 HOH HOH . 
E 5 HOH X 167 9437 142 HOH HOH . 
E 5 HOH X 168 9438 143 HOH HOH . 
E 5 HOH X 169 9439 144 HOH HOH . 
E 5 HOH X 170 9440 145 HOH HOH . 
E 5 HOH X 171 9441 146 HOH HOH . 
E 5 HOH X 172 9442 147 HOH HOH . 
E 5 HOH X 173 9443 148 HOH HOH . 
E 5 HOH X 174 9444 149 HOH HOH . 
E 5 HOH X 175 9445 150 HOH HOH . 
E 5 HOH X 176 9446 151 HOH HOH . 
E 5 HOH X 177 9447 152 HOH HOH . 
E 5 HOH X 178 9448 153 HOH HOH . 
E 5 HOH X 179 9449 154 HOH HOH . 
E 5 HOH X 180 9450 155 HOH HOH . 
E 5 HOH X 181 9451 156 HOH HOH . 
E 5 HOH X 182 9452 157 HOH HOH . 
E 5 HOH X 183 9453 158 HOH HOH . 
E 5 HOH X 184 9454 159 HOH HOH . 
E 5 HOH X 185 9455 160 HOH HOH . 
E 5 HOH X 186 9456 161 HOH HOH . 
E 5 HOH X 187 9457 162 HOH HOH . 
E 5 HOH X 188 9458 163 HOH HOH . 
E 5 HOH X 189 9459 164 HOH HOH . 
E 5 HOH X 190 9460 165 HOH HOH . 
E 5 HOH X 191 9461 166 HOH HOH . 
E 5 HOH X 192 9462 167 HOH HOH . 
E 5 HOH X 193 9463 168 HOH HOH . 
E 5 HOH X 194 9464 169 HOH HOH . 
E 5 HOH X 195 9465 170 HOH HOH . 
E 5 HOH X 196 9466 171 HOH HOH . 
E 5 HOH X 197 9467 172 HOH HOH . 
E 5 HOH X 198 9468 173 HOH HOH . 
E 5 HOH X 199 9469 174 HOH HOH . 
E 5 HOH X 200 9470 175 HOH HOH . 
E 5 HOH X 201 9471 176 HOH HOH . 
E 5 HOH X 202 9472 177 HOH HOH . 
E 5 HOH X 203 9473 178 HOH HOH . 
E 5 HOH X 204 9474 179 HOH HOH . 
E 5 HOH X 205 9475 180 HOH HOH . 
E 5 HOH X 206 9476 181 HOH HOH . 
E 5 HOH X 207 9477 182 HOH HOH . 
E 5 HOH X 208 9478 183 HOH HOH . 
E 5 HOH X 209 9479 184 HOH HOH . 
E 5 HOH X 210 9480 185 HOH HOH . 
E 5 HOH X 211 9481 186 HOH HOH . 
E 5 HOH X 212 9482 187 HOH HOH . 
E 5 HOH X 213 9483 188 HOH HOH . 
E 5 HOH X 214 9484 189 HOH HOH . 
E 5 HOH X 215 9485 190 HOH HOH . 
E 5 HOH X 216 9486 191 HOH HOH . 
E 5 HOH X 217 9487 192 HOH HOH . 
E 5 HOH X 218 9488 193 HOH HOH . 
E 5 HOH X 219 9489 194 HOH HOH . 
E 5 HOH X 220 9490 195 HOH HOH . 
E 5 HOH X 221 9491 196 HOH HOH . 
E 5 HOH X 222 9492 197 HOH HOH . 
E 5 HOH X 223 9493 198 HOH HOH . 
E 5 HOH X 224 9494 199 HOH HOH . 
E 5 HOH X 225 9495 200 HOH HOH . 
E 5 HOH X 226 9496 201 HOH HOH . 
E 5 HOH X 227 9497 202 HOH HOH . 
E 5 HOH X 228 9498 203 HOH HOH . 
E 5 HOH X 229 9499 204 HOH HOH . 
E 5 HOH X 230 9500 205 HOH HOH . 
E 5 HOH X 231 9501 206 HOH HOH . 
E 5 HOH X 232 9502 207 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C CYN . . . C 3 15.962 54.897 17.661 0.99 19.5 ? C CYN 9252 X 1 
HETATM 2 N N CYN . . . C 3 16.519 55.727 17.08 0.99 21.73 ? N CYN 9252 X 1 
#
_model_server_stats.io_time_ms              56 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           2 
#