data_2GHT # _model_server_result.job_id 5nkSd67tjLmgGSaon4KGbA _model_server_result.datetime_utc '2024-10-12 19:27:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ght # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":257}' # _entry.id 2GHT # _exptl.entry_id 2GHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.08 _cell.angle_gamma 90 _cell.entry_id 2GHT _cell.length_a 125.916 _cell.length_b 78.787 _cell.length_c 62.948 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C THR 5 C THR 173 1_555 C N SEP 6 C SEP 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 C C SEP 6 C SEP 174 1_555 C N PRO 7 C PRO 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 D C THR 5 D THR 173 1_555 D N SEP 6 D SEP 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 D C SEP 6 D SEP 174 1_555 D N PRO 7 D PRO 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? metalc ? metalc1 A OD1 ASN 21 A ASN 96 1_555 E MG MG . A MG 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc2 A O ASP 23 A ASP 98 1_555 E MG MG . A MG 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 A OD1 ASN 132 A ASN 207 1_555 E MG MG . A MG 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc4 E MG MG . A MG 257 1_555 G O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc5 E MG MG . A MG 257 1_555 G O HOH . A HOH 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc6 E MG MG . A MG 257 1_555 C O3P SEP 6 C SEP 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc7 B OD1 ASN 21 B ASN 96 1_555 F MG MG . B MG 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc8 B O ASP 23 B ASP 98 1_555 F MG MG . B MG 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc9 B ND2 ASN 132 B ASN 207 1_555 F MG MG . B MG 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc10 F MG MG . B MG 257 1_555 H O HOH . B HOH 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc11 F MG MG . B MG 257 1_555 D O1P SEP 6 D SEP 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2GHT _atom_sites.fract_transf_matrix[1][1] 0.007942 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003222 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017143 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG A 1 257 251 MG MG . F 3 MG B 1 257 252 MG MG . G 4 HOH A 1 258 245 HOH HOH . G 4 HOH A 2 259 6 HOH HOH . G 4 HOH A 3 260 7 HOH HOH . G 4 HOH A 4 261 8 HOH HOH . G 4 HOH A 5 262 11 HOH HOH . G 4 HOH A 6 263 14 HOH HOH . G 4 HOH A 7 264 20 HOH HOH . G 4 HOH A 8 265 22 HOH HOH . G 4 HOH A 9 266 25 HOH HOH . G 4 HOH A 10 267 31 HOH HOH . G 4 HOH A 11 268 34 HOH HOH . G 4 HOH A 12 269 43 HOH HOH . G 4 HOH A 13 270 46 HOH HOH . G 4 HOH A 14 271 47 HOH HOH . G 4 HOH A 15 272 48 HOH HOH . G 4 HOH A 16 273 54 HOH HOH . G 4 HOH A 17 274 57 HOH HOH . G 4 HOH A 18 275 58 HOH HOH . G 4 HOH A 19 276 63 HOH HOH . G 4 HOH A 20 277 69 HOH HOH . G 4 HOH A 21 278 72 HOH HOH . G 4 HOH A 22 279 73 HOH HOH . G 4 HOH A 23 280 74 HOH HOH . G 4 HOH A 24 281 78 HOH HOH . G 4 HOH A 25 282 82 HOH HOH . G 4 HOH A 26 283 83 HOH HOH . G 4 HOH A 27 284 86 HOH HOH . G 4 HOH A 28 285 87 HOH HOH . G 4 HOH A 29 286 91 HOH HOH . G 4 HOH A 30 287 93 HOH HOH . G 4 HOH A 31 288 97 HOH HOH . G 4 HOH A 32 289 98 HOH HOH . G 4 HOH A 33 290 104 HOH HOH . G 4 HOH A 34 291 105 HOH HOH . G 4 HOH A 35 292 107 HOH HOH . G 4 HOH A 36 293 109 HOH HOH . G 4 HOH A 37 294 114 HOH HOH . G 4 HOH A 38 295 117 HOH HOH . G 4 HOH A 39 296 119 HOH HOH . G 4 HOH A 40 297 124 HOH HOH . G 4 HOH A 41 298 126 HOH HOH . G 4 HOH A 42 299 130 HOH HOH . G 4 HOH A 43 300 131 HOH HOH . G 4 HOH A 44 301 132 HOH HOH . G 4 HOH A 45 302 133 HOH HOH . G 4 HOH A 46 303 134 HOH HOH . G 4 HOH A 47 304 135 HOH HOH . G 4 HOH A 48 305 138 HOH HOH . G 4 HOH A 49 306 139 HOH HOH . G 4 HOH A 50 307 142 HOH HOH . G 4 HOH A 51 308 145 HOH HOH . G 4 HOH A 52 309 148 HOH HOH . G 4 HOH A 53 310 152 HOH HOH . G 4 HOH A 54 311 154 HOH HOH . G 4 HOH A 55 312 155 HOH HOH . G 4 HOH A 56 313 156 HOH HOH . G 4 HOH A 57 314 158 HOH HOH . G 4 HOH A 58 315 159 HOH HOH . G 4 HOH A 59 316 162 HOH HOH . G 4 HOH A 60 317 163 HOH HOH . G 4 HOH A 61 318 165 HOH HOH . G 4 HOH A 62 319 3 HOH HOH . G 4 HOH A 63 320 168 HOH HOH . G 4 HOH A 64 321 171 HOH HOH . G 4 HOH A 65 322 173 HOH HOH . G 4 HOH A 66 323 175 HOH HOH . G 4 HOH A 67 324 179 HOH HOH . G 4 HOH A 68 325 182 HOH HOH . G 4 HOH A 69 326 183 HOH HOH . G 4 HOH A 70 327 184 HOH HOH . G 4 HOH A 71 328 185 HOH HOH . G 4 HOH A 72 329 189 HOH HOH . G 4 HOH A 73 330 196 HOH HOH . G 4 HOH A 74 331 200 HOH HOH . G 4 HOH A 75 332 201 HOH HOH . G 4 HOH A 76 333 205 HOH HOH . G 4 HOH A 77 334 206 HOH HOH . G 4 HOH A 78 335 210 HOH HOH . G 4 HOH A 79 336 211 HOH HOH . G 4 HOH A 80 337 212 HOH HOH . G 4 HOH A 81 338 221 HOH HOH . G 4 HOH A 82 339 222 HOH HOH . G 4 HOH A 83 340 223 HOH HOH . G 4 HOH A 84 341 227 HOH HOH . G 4 HOH A 85 342 228 HOH HOH . G 4 HOH A 86 343 229 HOH HOH . G 4 HOH A 87 344 231 HOH HOH . G 4 HOH A 88 345 233 HOH HOH . G 4 HOH A 89 346 234 HOH HOH . G 4 HOH A 90 347 236 HOH HOH . G 4 HOH A 91 348 237 HOH HOH . G 4 HOH A 92 349 238 HOH HOH . G 4 HOH A 93 350 240 HOH HOH . G 4 HOH A 94 351 4 HOH HOH . H 4 HOH B 1 258 166 HOH HOH . H 4 HOH B 2 259 5 HOH HOH . H 4 HOH B 3 260 246 HOH HOH . H 4 HOH B 4 261 2 HOH HOH . H 4 HOH B 5 262 9 HOH HOH . H 4 HOH B 6 263 10 HOH HOH . H 4 HOH B 7 264 12 HOH HOH . H 4 HOH B 8 265 13 HOH HOH . H 4 HOH B 9 266 15 HOH HOH . H 4 HOH B 10 267 16 HOH HOH . H 4 HOH B 11 268 17 HOH HOH . H 4 HOH B 12 269 18 HOH HOH . H 4 HOH B 13 270 19 HOH HOH . H 4 HOH B 14 271 21 HOH HOH . H 4 HOH B 15 272 23 HOH HOH . H 4 HOH B 16 273 24 HOH HOH . H 4 HOH B 17 274 26 HOH HOH . H 4 HOH B 18 275 27 HOH HOH . H 4 HOH B 19 276 28 HOH HOH . H 4 HOH B 20 277 29 HOH HOH . H 4 HOH B 21 278 30 HOH HOH . H 4 HOH B 22 279 32 HOH HOH . H 4 HOH B 23 280 33 HOH HOH . H 4 HOH B 24 281 35 HOH HOH . H 4 HOH B 25 282 36 HOH HOH . H 4 HOH B 26 283 37 HOH HOH . H 4 HOH B 27 284 38 HOH HOH . H 4 HOH B 28 285 40 HOH HOH . H 4 HOH B 29 286 41 HOH HOH . H 4 HOH B 30 287 42 HOH HOH . H 4 HOH B 31 288 44 HOH HOH . H 4 HOH B 32 289 45 HOH HOH . H 4 HOH B 33 290 49 HOH HOH . H 4 HOH B 34 291 50 HOH HOH . H 4 HOH B 35 292 51 HOH HOH . H 4 HOH B 36 293 52 HOH HOH . H 4 HOH B 37 294 53 HOH HOH . H 4 HOH B 38 295 55 HOH HOH . H 4 HOH B 39 296 56 HOH HOH . H 4 HOH B 40 297 59 HOH HOH . H 4 HOH B 41 298 60 HOH HOH . H 4 HOH B 42 299 61 HOH HOH . H 4 HOH B 43 300 62 HOH HOH . H 4 HOH B 44 301 64 HOH HOH . H 4 HOH B 45 302 65 HOH HOH . H 4 HOH B 46 303 66 HOH HOH . H 4 HOH B 47 304 67 HOH HOH . H 4 HOH B 48 305 68 HOH HOH . H 4 HOH B 49 306 70 HOH HOH . H 4 HOH B 50 307 71 HOH HOH . H 4 HOH B 51 308 75 HOH HOH . H 4 HOH B 52 309 76 HOH HOH . H 4 HOH B 53 310 77 HOH HOH . H 4 HOH B 54 311 79 HOH HOH . H 4 HOH B 55 312 80 HOH HOH . H 4 HOH B 56 313 81 HOH HOH . H 4 HOH B 57 314 84 HOH HOH . H 4 HOH B 58 315 85 HOH HOH . H 4 HOH B 59 316 88 HOH HOH . H 4 HOH B 60 317 89 HOH HOH . H 4 HOH B 61 318 90 HOH HOH . H 4 HOH B 62 319 92 HOH HOH . H 4 HOH B 63 320 94 HOH HOH . H 4 HOH B 64 321 96 HOH HOH . H 4 HOH B 65 322 100 HOH HOH . H 4 HOH B 66 323 101 HOH HOH . H 4 HOH B 67 324 102 HOH HOH . H 4 HOH B 68 325 103 HOH HOH . H 4 HOH B 69 326 106 HOH HOH . H 4 HOH B 70 327 108 HOH HOH . H 4 HOH B 71 328 110 HOH HOH . H 4 HOH B 72 329 111 HOH HOH . H 4 HOH B 73 330 112 HOH HOH . H 4 HOH B 74 331 113 HOH HOH . H 4 HOH B 75 332 115 HOH HOH . H 4 HOH B 76 333 116 HOH HOH . H 4 HOH B 77 334 118 HOH HOH . H 4 HOH B 78 335 121 HOH HOH . H 4 HOH B 79 336 122 HOH HOH . H 4 HOH B 80 337 125 HOH HOH . H 4 HOH B 81 338 127 HOH HOH . H 4 HOH B 82 339 128 HOH HOH . H 4 HOH B 83 340 129 HOH HOH . H 4 HOH B 84 341 136 HOH HOH . H 4 HOH B 85 342 137 HOH HOH . H 4 HOH B 86 343 140 HOH HOH . H 4 HOH B 87 344 143 HOH HOH . H 4 HOH B 88 345 144 HOH HOH . H 4 HOH B 89 346 146 HOH HOH . H 4 HOH B 90 347 147 HOH HOH . H 4 HOH B 91 348 149 HOH HOH . H 4 HOH B 92 349 150 HOH HOH . H 4 HOH B 93 350 151 HOH HOH . H 4 HOH B 94 351 153 HOH HOH . H 4 HOH B 95 352 157 HOH HOH . H 4 HOH B 96 353 160 HOH HOH . H 4 HOH B 97 354 161 HOH HOH . H 4 HOH B 98 355 164 HOH HOH . H 4 HOH B 99 356 167 HOH HOH . H 4 HOH B 100 357 169 HOH HOH . H 4 HOH B 101 358 170 HOH HOH . H 4 HOH B 102 359 172 HOH HOH . H 4 HOH B 103 360 174 HOH HOH . H 4 HOH B 104 361 176 HOH HOH . H 4 HOH B 105 362 177 HOH HOH . H 4 HOH B 106 363 178 HOH HOH . H 4 HOH B 107 364 180 HOH HOH . H 4 HOH B 108 365 186 HOH HOH . H 4 HOH B 109 366 187 HOH HOH . H 4 HOH B 110 367 188 HOH HOH . H 4 HOH B 111 368 190 HOH HOH . H 4 HOH B 112 369 191 HOH HOH . H 4 HOH B 113 370 192 HOH HOH . H 4 HOH B 114 371 193 HOH HOH . H 4 HOH B 115 372 195 HOH HOH . H 4 HOH B 116 373 197 HOH HOH . H 4 HOH B 117 374 198 HOH HOH . H 4 HOH B 118 375 199 HOH HOH . H 4 HOH B 119 376 202 HOH HOH . H 4 HOH B 120 377 203 HOH HOH . H 4 HOH B 121 378 204 HOH HOH . H 4 HOH B 122 379 207 HOH HOH . H 4 HOH B 123 380 208 HOH HOH . H 4 HOH B 124 381 209 HOH HOH . H 4 HOH B 125 382 213 HOH HOH . H 4 HOH B 126 383 214 HOH HOH . H 4 HOH B 127 384 215 HOH HOH . H 4 HOH B 128 385 216 HOH HOH . H 4 HOH B 129 386 217 HOH HOH . H 4 HOH B 130 387 218 HOH HOH . H 4 HOH B 131 388 219 HOH HOH . H 4 HOH B 132 389 220 HOH HOH . H 4 HOH B 133 390 224 HOH HOH . H 4 HOH B 134 391 226 HOH HOH . H 4 HOH B 135 392 230 HOH HOH . H 4 HOH B 136 393 235 HOH HOH . H 4 HOH B 137 394 239 HOH HOH . H 4 HOH B 138 395 241 HOH HOH . H 4 HOH B 139 396 242 HOH HOH . H 4 HOH B 140 397 243 HOH HOH . H 4 HOH B 141 398 244 HOH HOH . I 4 HOH C 1 95 95 HOH HOH . I 4 HOH C 2 123 123 HOH HOH . I 4 HOH C 3 194 194 HOH HOH . I 4 HOH C 4 232 232 HOH HOH . J 4 HOH D 1 39 39 HOH HOH . J 4 HOH D 2 99 99 HOH HOH . J 4 HOH D 3 120 120 HOH HOH . J 4 HOH D 4 141 141 HOH HOH . J 4 HOH D 5 181 181 HOH HOH . J 4 HOH D 6 225 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 65.091 _atom_site.Cartn_y 11.396 _atom_site.Cartn_z -22.499 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 257 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #