data_2GI7
#
_model_server_result.job_id            TgYSZ5zlYqOkL0YYZG00KQ 
_model_server_result.datetime_utc      '2024-11-25 16:06:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gi7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":202}' 
#
_entry.id    2GI7 
#
_exptl.entry_id    2GI7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GI7 
_cell.length_a            114.057 
_cell.length_b            45.286 
_cell.length_c            75.131 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GI7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 29 A CYS 28 1_555 A SG CYS 69 A CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 A SG CYS 115 A CYS 114 1_555 A SG CYS 161 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf3 B SG CYS 29 B CYS 28 1_555 B SG CYS 69 B CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 115 B CYS 114 1_555 B SG CYS 161 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2GI7 
_atom_sites.fract_transf_matrix[1][1]    0.008768 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022082 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01331 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 203 203 SO4 SO4 . 
D 2 SO4 A 1 204 204 SO4 SO4 . 
E 3 GOL A 1 202 202 GOL GOL . 
F 4 CL B 1 205 205 CL CL . 
G 3 GOL B 1 201 201 GOL GOL . 
H 5 HOH A 1 205 1 HOH HOH . 
H 5 HOH A 2 206 2 HOH HOH . 
H 5 HOH A 3 207 5 HOH HOH . 
H 5 HOH A 4 208 6 HOH HOH . 
H 5 HOH A 5 209 14 HOH HOH . 
H 5 HOH A 6 210 16 HOH HOH . 
H 5 HOH A 7 211 17 HOH HOH . 
H 5 HOH A 8 212 18 HOH HOH . 
H 5 HOH A 9 213 19 HOH HOH . 
H 5 HOH A 10 214 20 HOH HOH . 
H 5 HOH A 11 215 21 HOH HOH . 
H 5 HOH A 12 216 22 HOH HOH . 
H 5 HOH A 13 217 24 HOH HOH . 
H 5 HOH A 14 218 25 HOH HOH . 
H 5 HOH A 15 219 27 HOH HOH . 
H 5 HOH A 16 220 29 HOH HOH . 
H 5 HOH A 17 221 31 HOH HOH . 
H 5 HOH A 18 222 33 HOH HOH . 
H 5 HOH A 19 223 34 HOH HOH . 
H 5 HOH A 20 224 36 HOH HOH . 
H 5 HOH A 21 225 38 HOH HOH . 
H 5 HOH A 22 226 39 HOH HOH . 
H 5 HOH A 23 227 40 HOH HOH . 
H 5 HOH A 24 228 41 HOH HOH . 
H 5 HOH A 25 229 42 HOH HOH . 
H 5 HOH A 26 230 47 HOH HOH . 
H 5 HOH A 27 231 48 HOH HOH . 
H 5 HOH A 28 232 51 HOH HOH . 
H 5 HOH A 29 233 52 HOH HOH . 
H 5 HOH A 30 234 54 HOH HOH . 
H 5 HOH A 31 235 56 HOH HOH . 
H 5 HOH A 32 236 58 HOH HOH . 
H 5 HOH A 33 237 59 HOH HOH . 
H 5 HOH A 34 238 64 HOH HOH . 
H 5 HOH A 35 239 66 HOH HOH . 
H 5 HOH A 36 240 68 HOH HOH . 
H 5 HOH A 37 241 70 HOH HOH . 
H 5 HOH A 38 242 72 HOH HOH . 
H 5 HOH A 39 243 73 HOH HOH . 
H 5 HOH A 40 244 74 HOH HOH . 
H 5 HOH A 41 245 77 HOH HOH . 
H 5 HOH A 42 246 79 HOH HOH . 
H 5 HOH A 43 247 80 HOH HOH . 
H 5 HOH A 44 248 82 HOH HOH . 
H 5 HOH A 45 249 83 HOH HOH . 
H 5 HOH A 46 250 84 HOH HOH . 
H 5 HOH A 47 251 85 HOH HOH . 
H 5 HOH A 48 252 87 HOH HOH . 
H 5 HOH A 49 253 88 HOH HOH . 
H 5 HOH A 50 254 91 HOH HOH . 
H 5 HOH A 51 255 92 HOH HOH . 
H 5 HOH A 52 256 97 HOH HOH . 
H 5 HOH A 53 257 98 HOH HOH . 
H 5 HOH A 54 258 99 HOH HOH . 
H 5 HOH A 55 259 101 HOH HOH . 
H 5 HOH A 56 260 102 HOH HOH . 
H 5 HOH A 57 261 104 HOH HOH . 
H 5 HOH A 58 262 105 HOH HOH . 
H 5 HOH A 59 263 107 HOH HOH . 
H 5 HOH A 60 264 108 HOH HOH . 
H 5 HOH A 61 265 109 HOH HOH . 
H 5 HOH A 62 266 111 HOH HOH . 
H 5 HOH A 63 267 112 HOH HOH . 
H 5 HOH A 64 268 113 HOH HOH . 
H 5 HOH A 65 269 114 HOH HOH . 
H 5 HOH A 66 270 116 HOH HOH . 
H 5 HOH A 67 271 118 HOH HOH . 
H 5 HOH A 68 272 122 HOH HOH . 
H 5 HOH A 69 273 124 HOH HOH . 
H 5 HOH A 70 274 126 HOH HOH . 
H 5 HOH A 71 275 128 HOH HOH . 
H 5 HOH A 72 276 129 HOH HOH . 
H 5 HOH A 73 277 134 HOH HOH . 
H 5 HOH A 74 278 135 HOH HOH . 
H 5 HOH A 75 279 136 HOH HOH . 
H 5 HOH A 76 280 137 HOH HOH . 
H 5 HOH A 77 281 138 HOH HOH . 
H 5 HOH A 78 282 140 HOH HOH . 
H 5 HOH A 79 283 141 HOH HOH . 
H 5 HOH A 80 284 142 HOH HOH . 
H 5 HOH A 81 285 147 HOH HOH . 
H 5 HOH A 82 286 149 HOH HOH . 
H 5 HOH A 83 287 151 HOH HOH . 
H 5 HOH A 84 288 152 HOH HOH . 
H 5 HOH A 85 289 154 HOH HOH . 
H 5 HOH A 86 290 155 HOH HOH . 
H 5 HOH A 87 291 156 HOH HOH . 
H 5 HOH A 88 292 157 HOH HOH . 
H 5 HOH A 89 293 161 HOH HOH . 
H 5 HOH A 90 294 162 HOH HOH . 
H 5 HOH A 91 295 163 HOH HOH . 
H 5 HOH A 92 296 164 HOH HOH . 
H 5 HOH A 93 297 165 HOH HOH . 
H 5 HOH A 94 298 166 HOH HOH . 
H 5 HOH A 95 299 167 HOH HOH . 
H 5 HOH A 96 300 168 HOH HOH . 
H 5 HOH A 97 301 169 HOH HOH . 
H 5 HOH A 98 302 170 HOH HOH . 
H 5 HOH A 99 303 174 HOH HOH . 
I 5 HOH B 1 206 3 HOH HOH . 
I 5 HOH B 2 207 4 HOH HOH . 
I 5 HOH B 3 208 7 HOH HOH . 
I 5 HOH B 4 209 8 HOH HOH . 
I 5 HOH B 5 210 9 HOH HOH . 
I 5 HOH B 6 211 10 HOH HOH . 
I 5 HOH B 7 212 11 HOH HOH . 
I 5 HOH B 8 213 12 HOH HOH . 
I 5 HOH B 9 214 13 HOH HOH . 
I 5 HOH B 10 215 15 HOH HOH . 
I 5 HOH B 11 216 23 HOH HOH . 
I 5 HOH B 12 217 26 HOH HOH . 
I 5 HOH B 13 218 28 HOH HOH . 
I 5 HOH B 14 219 30 HOH HOH . 
I 5 HOH B 15 220 32 HOH HOH . 
I 5 HOH B 16 221 35 HOH HOH . 
I 5 HOH B 17 222 37 HOH HOH . 
I 5 HOH B 18 223 43 HOH HOH . 
I 5 HOH B 19 224 44 HOH HOH . 
I 5 HOH B 20 225 45 HOH HOH . 
I 5 HOH B 21 226 46 HOH HOH . 
I 5 HOH B 22 227 49 HOH HOH . 
I 5 HOH B 23 228 50 HOH HOH . 
I 5 HOH B 24 229 53 HOH HOH . 
I 5 HOH B 25 230 55 HOH HOH . 
I 5 HOH B 26 231 57 HOH HOH . 
I 5 HOH B 27 232 60 HOH HOH . 
I 5 HOH B 28 233 61 HOH HOH . 
I 5 HOH B 29 234 62 HOH HOH . 
I 5 HOH B 30 235 63 HOH HOH . 
I 5 HOH B 31 236 65 HOH HOH . 
I 5 HOH B 32 237 67 HOH HOH . 
I 5 HOH B 33 238 69 HOH HOH . 
I 5 HOH B 34 239 71 HOH HOH . 
I 5 HOH B 35 240 75 HOH HOH . 
I 5 HOH B 36 241 76 HOH HOH . 
I 5 HOH B 37 242 78 HOH HOH . 
I 5 HOH B 38 243 81 HOH HOH . 
I 5 HOH B 39 244 86 HOH HOH . 
I 5 HOH B 40 245 89 HOH HOH . 
I 5 HOH B 41 246 90 HOH HOH . 
I 5 HOH B 42 247 93 HOH HOH . 
I 5 HOH B 43 248 94 HOH HOH . 
I 5 HOH B 44 249 95 HOH HOH . 
I 5 HOH B 45 250 96 HOH HOH . 
I 5 HOH B 46 251 100 HOH HOH . 
I 5 HOH B 47 252 103 HOH HOH . 
I 5 HOH B 48 253 106 HOH HOH . 
I 5 HOH B 49 254 110 HOH HOH . 
I 5 HOH B 50 255 115 HOH HOH . 
I 5 HOH B 51 256 117 HOH HOH . 
I 5 HOH B 52 257 119 HOH HOH . 
I 5 HOH B 53 258 120 HOH HOH . 
I 5 HOH B 54 259 121 HOH HOH . 
I 5 HOH B 55 260 123 HOH HOH . 
I 5 HOH B 56 261 125 HOH HOH . 
I 5 HOH B 57 262 127 HOH HOH . 
I 5 HOH B 58 263 130 HOH HOH . 
I 5 HOH B 59 264 131 HOH HOH . 
I 5 HOH B 60 265 132 HOH HOH . 
I 5 HOH B 61 266 133 HOH HOH . 
I 5 HOH B 62 267 139 HOH HOH . 
I 5 HOH B 63 268 143 HOH HOH . 
I 5 HOH B 64 269 144 HOH HOH . 
I 5 HOH B 65 270 145 HOH HOH . 
I 5 HOH B 66 271 146 HOH HOH . 
I 5 HOH B 67 272 148 HOH HOH . 
I 5 HOH B 68 273 150 HOH HOH . 
I 5 HOH B 69 274 153 HOH HOH . 
I 5 HOH B 70 275 158 HOH HOH . 
I 5 HOH B 71 276 159 HOH HOH . 
I 5 HOH B 72 277 160 HOH HOH . 
I 5 HOH B 73 278 171 HOH HOH . 
I 5 HOH B 74 279 172 HOH HOH . 
I 5 HOH B 75 280 173 HOH HOH . 
I 5 HOH B 76 281 175 HOH HOH . 
I 5 HOH B 77 282 176 HOH HOH . 
I 5 HOH B 78 283 177 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 22.671 17.818 31.896 1 75.74 ? C1 GOL 202 A 1 
HETATM 2 O O1 GOL . . . E 3 22.596 19.139 32.42 1 74.69 ? O1 GOL 202 A 1 
HETATM 3 C C2 GOL . . . E 3 21.676 16.857 32.567 1 74.89 ? C2 GOL 202 A 1 
HETATM 4 O O2 GOL . . . E 3 22.195 15.532 32.582 1 74.29 ? O2 GOL 202 A 1 
HETATM 5 C C3 GOL . . . E 3 20.351 16.912 31.832 1 75.05 ? C3 GOL 202 A 1 
HETATM 6 O O3 GOL . . . E 3 19.369 16.082 32.439 1 74.07 ? O3 GOL 202 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#