data_2GJ2
#
_model_server_result.job_id            XSmi7UJm4gzueyccarl8Pg 
_model_server_result.datetime_utc      '2025-01-07 07:35:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gj2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":205}' 
#
_entry.id    2GJ2 
#
_exptl.entry_id    2GJ2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GJ2 
_cell.length_a            74.133 
_cell.length_b            78.205 
_cell.length_c            78.979 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GJ2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA tetrameric 4 software_defined_assembly 3 
PISA dimeric 2 software_defined_assembly 4 
PISA dimeric 2 software_defined_assembly 5 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,K,L,M,P 1 1 
B,C,G,H,I,J,N,O 2 1 
C,I,J,O 3 2 
D,K,L,P 3 3 
A,B,E,F,G,H,M,N 3 1 
C,I,J,O 4 1 
A,E,F,M 4 4 
D,K,L,P 5 1 
B,G,H,N 5 5 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_645 -x+1,y-1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 74.133 -39.1025 39.4895 
3 'crystal symmetry operation' 4_455 x-1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 -37.0665 39.1025 0 
4 'crystal symmetry operation' 3_655 -x+1,y+1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 74.133 39.1025 39.4895 
5 'crystal symmetry operation' 4_555 x+1/2,-y+1/2,-z 1 0 0 0 -1 0 0 0 -1 37.0665 39.1025 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 12 A ASP 9 1_555 E CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc2 A OD2 ASP 12 A ASP 9 1_555 E CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc3 A OE1 GLU 34 A GLU 31 1_555 F CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? 
metalc ? metalc4 A OE2 GLU 34 A GLU 31 1_555 K CD CD . D CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? 
metalc ? metalc5 E CD CD . A CD 201 1_555 M O HOH . A HOH 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
metalc ? metalc6 E CD CD . A CD 201 1_555 D OE2 GLU 34 D GLU 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc7 F CD CD . A CD 203 1_555 D OE1 GLU 34 D GLU 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.894 ? 
metalc ? metalc8 F CD CD . A CD 203 1_555 P O HOH . D HOH 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc9 M O HOH . A HOH 230 1_555 K CD CD . D CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
metalc ? metalc10 B OD2 ASP 12 B ASP 9 1_555 H CD CD . B CD 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc11 B OE1 GLU 34 B GLU 31 1_555 G CD CD . B CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc12 B OE2 GLU 34 B GLU 31 1_555 I CD CD . C CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc13 G CD CD . B CD 202 1_555 C OE1 GLU 34 C GLU 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc14 H CD CD . B CD 205 1_555 C OE2 GLU 34 C GLU 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc15 C OD2 ASP 12 C ASP 9 1_555 I CD CD . C CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc16 C OE1 GLU 63 C GLU 60 1_555 J CD CD . C CD 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.568 ? 
metalc ? metalc17 D OD2 ASP 12 D ASP 9 1_555 K CD CD . D CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc18 D SG CYS 49 D CYS 46 1_555 K CD CD . D CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? 
metalc ? metalc19 D OE1 GLU 75 D GLU 72 1_555 L CD CD . D CD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2GJ2 
_atom_sites.fract_transf_matrix[1][1]    0.013489 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012787 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012662 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CD A 1 201 1 CD CD2 . 
F 2 CD A 1 203 3 CD CD2 . 
G 2 CD B 1 202 2 CD CD2 . 
H 2 CD B 1 205 5 CD CD2 . 
I 2 CD C 1 206 6 CD CD2 . 
J 2 CD C 1 208 8 CD CD2 . 
K 2 CD D 1 204 4 CD CD2 . 
L 2 CD D 1 207 7 CD CD2 . 
M 3 HOH A 1 204 2 HOH TIP . 
M 3 HOH A 2 205 4 HOH TIP . 
M 3 HOH A 3 206 13 HOH TIP . 
M 3 HOH A 4 207 14 HOH TIP . 
M 3 HOH A 5 208 18 HOH TIP . 
M 3 HOH A 6 209 19 HOH TIP . 
M 3 HOH A 7 210 20 HOH TIP . 
M 3 HOH A 8 211 24 HOH TIP . 
M 3 HOH A 9 212 27 HOH TIP . 
M 3 HOH A 10 213 35 HOH TIP . 
M 3 HOH A 11 214 39 HOH TIP . 
M 3 HOH A 12 215 51 HOH TIP . 
M 3 HOH A 13 216 52 HOH TIP . 
M 3 HOH A 14 217 54 HOH TIP . 
M 3 HOH A 15 218 56 HOH TIP . 
M 3 HOH A 16 219 58 HOH TIP . 
M 3 HOH A 17 220 72 HOH TIP . 
M 3 HOH A 18 221 73 HOH TIP . 
M 3 HOH A 19 222 76 HOH TIP . 
M 3 HOH A 20 223 83 HOH TIP . 
M 3 HOH A 21 224 84 HOH TIP . 
M 3 HOH A 22 225 93 HOH TIP . 
M 3 HOH A 23 226 95 HOH TIP . 
M 3 HOH A 24 227 97 HOH TIP . 
M 3 HOH A 25 228 98 HOH TIP . 
M 3 HOH A 26 229 101 HOH TIP . 
M 3 HOH A 27 230 102 HOH TIP . 
M 3 HOH A 28 231 105 HOH TIP . 
M 3 HOH A 29 232 108 HOH TIP . 
M 3 HOH A 30 233 114 HOH TIP . 
M 3 HOH A 31 234 120 HOH TIP . 
M 3 HOH A 32 235 123 HOH TIP . 
N 3 HOH B 1 206 12 HOH TIP . 
N 3 HOH B 2 207 23 HOH TIP . 
N 3 HOH B 3 208 29 HOH TIP . 
N 3 HOH B 4 209 30 HOH TIP . 
N 3 HOH B 5 210 33 HOH TIP . 
N 3 HOH B 6 211 34 HOH TIP . 
N 3 HOH B 7 212 37 HOH TIP . 
N 3 HOH B 8 213 38 HOH TIP . 
N 3 HOH B 9 214 42 HOH TIP . 
N 3 HOH B 10 215 57 HOH TIP . 
N 3 HOH B 11 216 60 HOH TIP . 
N 3 HOH B 12 217 61 HOH TIP . 
N 3 HOH B 13 218 62 HOH TIP . 
N 3 HOH B 14 219 65 HOH TIP . 
N 3 HOH B 15 220 70 HOH TIP . 
N 3 HOH B 16 221 75 HOH TIP . 
N 3 HOH B 17 222 88 HOH TIP . 
N 3 HOH B 18 223 90 HOH TIP . 
N 3 HOH B 19 224 92 HOH TIP . 
N 3 HOH B 20 225 100 HOH TIP . 
N 3 HOH B 21 226 109 HOH TIP . 
N 3 HOH B 22 227 110 HOH TIP . 
N 3 HOH B 23 228 113 HOH TIP . 
N 3 HOH B 24 229 121 HOH TIP . 
N 3 HOH B 25 230 122 HOH TIP . 
N 3 HOH B 26 231 124 HOH TIP . 
O 3 HOH C 1 209 1 HOH TIP . 
O 3 HOH C 2 210 5 HOH TIP . 
O 3 HOH C 3 211 6 HOH TIP . 
O 3 HOH C 4 212 9 HOH TIP . 
O 3 HOH C 5 213 15 HOH TIP . 
O 3 HOH C 6 214 17 HOH TIP . 
O 3 HOH C 7 215 22 HOH TIP . 
O 3 HOH C 8 216 25 HOH TIP . 
O 3 HOH C 9 217 32 HOH TIP . 
O 3 HOH C 10 218 36 HOH TIP . 
O 3 HOH C 11 219 43 HOH TIP . 
O 3 HOH C 12 220 44 HOH TIP . 
O 3 HOH C 13 221 45 HOH TIP . 
O 3 HOH C 14 222 59 HOH TIP . 
O 3 HOH C 15 223 64 HOH TIP . 
O 3 HOH C 16 224 66 HOH TIP . 
O 3 HOH C 17 225 68 HOH TIP . 
O 3 HOH C 18 226 69 HOH TIP . 
O 3 HOH C 19 227 71 HOH TIP . 
O 3 HOH C 20 228 77 HOH TIP . 
O 3 HOH C 21 229 78 HOH TIP . 
O 3 HOH C 22 230 80 HOH TIP . 
O 3 HOH C 23 231 82 HOH TIP . 
O 3 HOH C 24 232 85 HOH TIP . 
O 3 HOH C 25 233 86 HOH TIP . 
O 3 HOH C 26 234 89 HOH TIP . 
O 3 HOH C 27 235 99 HOH TIP . 
O 3 HOH C 28 236 104 HOH TIP . 
O 3 HOH C 29 237 106 HOH TIP . 
O 3 HOH C 30 238 112 HOH TIP . 
O 3 HOH C 31 239 117 HOH TIP . 
O 3 HOH C 32 240 119 HOH TIP . 
P 3 HOH D 1 208 3 HOH TIP . 
P 3 HOH D 2 209 7 HOH TIP . 
P 3 HOH D 3 210 8 HOH TIP . 
P 3 HOH D 4 211 10 HOH TIP . 
P 3 HOH D 5 212 11 HOH TIP . 
P 3 HOH D 6 213 16 HOH TIP . 
P 3 HOH D 7 214 21 HOH TIP . 
P 3 HOH D 8 215 26 HOH TIP . 
P 3 HOH D 9 216 28 HOH TIP . 
P 3 HOH D 10 217 31 HOH TIP . 
P 3 HOH D 11 218 40 HOH TIP . 
P 3 HOH D 12 219 41 HOH TIP . 
P 3 HOH D 13 220 46 HOH TIP . 
P 3 HOH D 14 221 47 HOH TIP . 
P 3 HOH D 15 222 48 HOH TIP . 
P 3 HOH D 16 223 49 HOH TIP . 
P 3 HOH D 17 224 50 HOH TIP . 
P 3 HOH D 18 225 53 HOH TIP . 
P 3 HOH D 19 226 55 HOH TIP . 
P 3 HOH D 20 227 63 HOH TIP . 
P 3 HOH D 21 228 67 HOH TIP . 
P 3 HOH D 22 229 74 HOH TIP . 
P 3 HOH D 23 230 79 HOH TIP . 
P 3 HOH D 24 231 81 HOH TIP . 
P 3 HOH D 25 232 87 HOH TIP . 
P 3 HOH D 26 233 91 HOH TIP . 
P 3 HOH D 27 234 94 HOH TIP . 
P 3 HOH D 28 235 96 HOH TIP . 
P 3 HOH D 29 236 103 HOH TIP . 
P 3 HOH D 30 237 107 HOH TIP . 
P 3 HOH D 31 238 111 HOH TIP . 
P 3 HOH D 32 239 115 HOH TIP . 
P 3 HOH D 33 240 116 HOH TIP . 
P 3 HOH D 34 241 118 HOH TIP . 
P 3 HOH D 35 242 125 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               30.905 
_atom_site.Cartn_y               26.188 
_atom_site.Cartn_z               24.1 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        40.62 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           205 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#