data_2GJ6 # _model_server_result.job_id vxhGbQDlcl2Xf1_HJkf5Tg _model_server_result.datetime_utc '2024-11-01 11:19:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gj6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":418}' # _entry.id 2GJ6 # _exptl.entry_id 2GJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.34 _cell.angle_gamma 90 _cell.entry_id 2GJ6 _cell.length_a 223.846 _cell.length_b 49.019 _cell.length_c 94.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GJ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 J N N ? 6 U N N ? 6 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 D SG CYS 22 D CYS 22 1_555 D SG CYS 88 D CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf5 D SG CYS 133 D CYS 139 1_555 D SG CYS 183 D CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf6 E SG CYS 23 E CYS 23 1_555 E SG CYS 91 E CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? disulf ? disulf7 E SG CYS 146 E CYS 147 1_555 E SG CYS 211 E CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 C NZ LYS 5 C LYS 5 1_555 S C13 3IB . C 3IB 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 332 n n S O2 SO4 doub 333 n n S O3 SO4 sing 334 n n S O4 SO4 sing 335 n n # _atom_sites.entry_id 2GJ6 _atom_sites.fract_transf_matrix[1][1] 0.004467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000027 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010619 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 SO4 A 1 416 3 SO4 SO4 . G 6 SO4 A 1 418 5 SO4 SO4 . H 7 GOL A 1 402 2 GOL GOL . I 7 GOL A 1 413 13 GOL GOL . J 6 SO4 B 1 417 4 SO4 SO4 . K 7 GOL B 1 401 1 GOL GOL . L 7 GOL B 1 403 3 GOL GOL . M 7 GOL B 1 406 6 GOL GOL . N 7 GOL B 1 407 7 GOL GOL . O 7 GOL B 1 408 8 GOL GOL . P 7 GOL B 1 409 9 GOL GOL . Q 7 GOL B 1 411 11 GOL GOL . R 7 GOL B 1 412 12 GOL GOL . S 8 3IB C 1 10 5 3IB LYI . T 7 GOL C 1 405 5 GOL GOL . U 6 SO4 E 1 414 1 SO4 SO4 . V 6 SO4 E 1 415 2 SO4 SO4 . W 7 GOL E 1 404 4 GOL GOL . X 7 GOL E 1 410 10 GOL GOL . Y 9 HOH A 1 419 6 HOH HOH . Y 9 HOH A 2 420 8 HOH HOH . Y 9 HOH A 3 421 11 HOH HOH . Y 9 HOH A 4 422 12 HOH HOH . Y 9 HOH A 5 423 13 HOH HOH . Y 9 HOH A 6 424 14 HOH HOH . Y 9 HOH A 7 425 15 HOH HOH . Y 9 HOH A 8 426 17 HOH HOH . Y 9 HOH A 9 427 18 HOH HOH . Y 9 HOH A 10 428 19 HOH HOH . Y 9 HOH A 11 429 23 HOH HOH . Y 9 HOH A 12 430 24 HOH HOH . Y 9 HOH A 13 431 26 HOH HOH . Y 9 HOH A 14 432 27 HOH HOH . Y 9 HOH A 15 433 28 HOH HOH . Y 9 HOH A 16 434 30 HOH HOH . Y 9 HOH A 17 435 31 HOH HOH . Y 9 HOH A 18 436 35 HOH HOH . Y 9 HOH A 19 437 37 HOH HOH . Y 9 HOH A 20 438 44 HOH HOH . Y 9 HOH A 21 439 45 HOH HOH . Y 9 HOH A 22 440 46 HOH HOH . Y 9 HOH A 23 441 48 HOH HOH . Y 9 HOH A 24 442 53 HOH HOH . Y 9 HOH A 25 443 57 HOH HOH . Y 9 HOH A 26 444 58 HOH HOH . Y 9 HOH A 27 445 60 HOH HOH . Y 9 HOH A 28 446 62 HOH HOH . Y 9 HOH A 29 447 63 HOH HOH . Y 9 HOH A 30 448 65 HOH HOH . Y 9 HOH A 31 449 66 HOH HOH . Y 9 HOH A 32 450 67 HOH HOH . Y 9 HOH A 33 451 68 HOH HOH . Y 9 HOH A 34 452 69 HOH HOH . Y 9 HOH A 35 453 70 HOH HOH . Y 9 HOH A 36 454 73 HOH HOH . Y 9 HOH A 37 455 75 HOH HOH . Y 9 HOH A 38 456 87 HOH HOH . Y 9 HOH A 39 457 88 HOH HOH . Z 9 HOH B 1 418 1 HOH HOH . Z 9 HOH B 2 419 2 HOH HOH . Z 9 HOH B 3 420 3 HOH HOH . Z 9 HOH B 4 421 7 HOH HOH . Z 9 HOH B 5 422 25 HOH HOH . Z 9 HOH B 6 423 29 HOH HOH . Z 9 HOH B 7 424 32 HOH HOH . Z 9 HOH B 8 425 33 HOH HOH . Z 9 HOH B 9 426 34 HOH HOH . Z 9 HOH B 10 427 36 HOH HOH . Z 9 HOH B 11 428 40 HOH HOH . Z 9 HOH B 12 429 49 HOH HOH . Z 9 HOH B 13 430 56 HOH HOH . Z 9 HOH B 14 431 61 HOH HOH . Z 9 HOH B 15 432 71 HOH HOH . Z 9 HOH B 16 433 74 HOH HOH . Z 9 HOH B 17 434 77 HOH HOH . Z 9 HOH B 18 435 84 HOH HOH . Z 9 HOH B 19 436 86 HOH HOH . AA 9 HOH C 1 41 41 HOH HOH . BA 9 HOH D 1 207 5 HOH HOH . BA 9 HOH D 2 208 9 HOH HOH . BA 9 HOH D 3 209 10 HOH HOH . BA 9 HOH D 4 210 16 HOH HOH . BA 9 HOH D 5 211 22 HOH HOH . BA 9 HOH D 6 212 38 HOH HOH . BA 9 HOH D 7 213 42 HOH HOH . BA 9 HOH D 8 214 43 HOH HOH . BA 9 HOH D 9 215 64 HOH HOH . BA 9 HOH D 10 216 72 HOH HOH . BA 9 HOH D 11 217 80 HOH HOH . BA 9 HOH D 12 218 81 HOH HOH . BA 9 HOH D 13 219 82 HOH HOH . BA 9 HOH D 14 220 83 HOH HOH . CA 9 HOH E 1 416 4 HOH HOH . CA 9 HOH E 2 417 20 HOH HOH . CA 9 HOH E 3 418 21 HOH HOH . CA 9 HOH E 4 419 39 HOH HOH . CA 9 HOH E 5 420 47 HOH HOH . CA 9 HOH E 6 421 50 HOH HOH . CA 9 HOH E 7 422 51 HOH HOH . CA 9 HOH E 8 423 52 HOH HOH . CA 9 HOH E 9 424 54 HOH HOH . CA 9 HOH E 10 425 55 HOH HOH . CA 9 HOH E 11 426 59 HOH HOH . CA 9 HOH E 12 427 76 HOH HOH . CA 9 HOH E 13 428 78 HOH HOH . CA 9 HOH E 14 429 79 HOH HOH . CA 9 HOH E 15 430 85 HOH HOH . CA 9 HOH E 16 431 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 6 54.783 0.442 11.213 0.5 46.27 ? S SO4 418 A 1 HETATM 2 O O1 SO4 . . . G 6 53.448 0.33 11.799 0.5 44.63 ? O1 SO4 418 A 1 HETATM 3 O O2 SO4 . . . G 6 54.702 1.482 10.184 0.5 44.79 ? O2 SO4 418 A 1 HETATM 4 O O3 SO4 . . . G 6 55.237 -0.819 10.61 0.5 44.41 ? O3 SO4 418 A 1 HETATM 5 O O4 SO4 . . . G 6 55.746 0.791 12.273 0.5 45.25 ? O4 SO4 418 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #