data_2GLR # _model_server_result.job_id 6CF8pR9CBwz7hghGYi25ag _model_server_result.datetime_utc '2024-10-19 15:42:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2glr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":210}' # _entry.id 2GLR # _exptl.entry_id 2GLR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.491 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-HEXYLGLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2GLR _cell.length_a 101.95 _cell.length_b 77.64 _cell.length_c 57.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GLR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C16 H30 N3 O6 S 1' _chem_comp.formula_weight 392.491 _chem_comp.id GTX _chem_comp.mon_nstd_flag . _chem_comp.name S-HEXYLGLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GTX sing 129 n n N1 HN11 GTX sing 130 n n N1 HN12 GTX sing 131 n n N1 HN13 GTX sing 132 n n CA1 C1 GTX sing 133 n n CA1 CB1 GTX sing 134 n n CA1 HA1 GTX sing 135 n n C1 O11 GTX doub 136 n n C1 O12 GTX sing 137 n n O12 HO2 GTX sing 138 n n CB1 CG1 GTX sing 139 n n CB1 HB11 GTX sing 140 n n CB1 HB12 GTX sing 141 n n CG1 CD1 GTX sing 142 n n CG1 HG11 GTX sing 143 n n CG1 HG12 GTX sing 144 n n CD1 OE1 GTX doub 145 n n CD1 N2 GTX sing 146 n n N2 CA2 GTX sing 147 n n N2 HN2 GTX sing 148 n n CA2 C2 GTX sing 149 n n CA2 CB2 GTX sing 150 n n CA2 HA2 GTX sing 151 n n C2 O2 GTX doub 152 n n C2 N3 GTX sing 153 n n CB2 SG2 GTX sing 154 n n CB2 HB21 GTX sing 155 n n CB2 HB22 GTX sing 156 n n SG2 C1S GTX sing 157 n n C1S C2S GTX sing 158 n n C1S HS11 GTX sing 159 n n C1S HS12 GTX sing 160 n n C2S C3S GTX sing 161 n n C2S HS21 GTX sing 162 n n C2S HS22 GTX sing 163 n n C3S C4S GTX sing 164 n n C3S HS31 GTX sing 165 n n C3S HS32 GTX sing 166 n n C4S C5S GTX sing 167 n n C4S HS41 GTX sing 168 n n C4S HS42 GTX sing 169 n n C5S C6S GTX sing 170 n n C5S HS51 GTX sing 171 n n C5S HS52 GTX sing 172 n n C6S HS61 GTX sing 173 n n C6S HS62 GTX sing 174 n n C6S HS63 GTX sing 175 n n N3 CA3 GTX sing 176 n n N3 HN3 GTX sing 177 n n CA3 C3 GTX sing 178 n n CA3 HA31 GTX sing 179 n n CA3 HA32 GTX sing 180 n n C3 O31 GTX doub 181 n n C3 O32 GTX sing 182 n n O32 HO3 GTX sing 183 n n # _atom_sites.entry_id 2GLR _atom_sites.fract_transf_matrix[1][1] 0.009809 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01288 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017422 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GTX A 1 210 1 GTX GTX . D 2 GTX B 1 210 1 GTX GTX . E 3 HOH A 1 211 1 HOH HOH . E 3 HOH A 2 212 2 HOH HOH . E 3 HOH A 3 213 3 HOH HOH . E 3 HOH A 4 214 4 HOH HOH . E 3 HOH A 5 215 5 HOH HOH . E 3 HOH A 6 216 6 HOH HOH . E 3 HOH A 7 217 7 HOH HOH . E 3 HOH A 8 218 8 HOH HOH . E 3 HOH A 9 219 9 HOH HOH . E 3 HOH A 10 220 11 HOH HOH . E 3 HOH A 11 221 12 HOH HOH . E 3 HOH A 12 222 15 HOH HOH . E 3 HOH A 13 223 16 HOH HOH . E 3 HOH A 14 224 17 HOH HOH . E 3 HOH A 15 225 18 HOH HOH . E 3 HOH A 16 226 19 HOH HOH . E 3 HOH A 17 227 20 HOH HOH . E 3 HOH A 18 228 24 HOH HOH . E 3 HOH A 19 229 30 HOH HOH . E 3 HOH A 20 230 31 HOH HOH . E 3 HOH A 21 231 32 HOH HOH . E 3 HOH A 22 232 33 HOH HOH . E 3 HOH A 23 233 34 HOH HOH . E 3 HOH A 24 234 36 HOH HOH . E 3 HOH A 25 235 38 HOH HOH . E 3 HOH A 26 236 39 HOH HOH . E 3 HOH A 27 237 41 HOH HOH . E 3 HOH A 28 238 42 HOH HOH . E 3 HOH A 29 239 43 HOH HOH . E 3 HOH A 30 240 45 HOH HOH . E 3 HOH A 31 241 46 HOH HOH . E 3 HOH A 32 242 47 HOH HOH . E 3 HOH A 33 243 59 HOH HOH . E 3 HOH A 34 244 60 HOH HOH . E 3 HOH A 35 245 61 HOH HOH . E 3 HOH A 36 246 62 HOH HOH . E 3 HOH A 37 247 63 HOH HOH . E 3 HOH A 38 248 64 HOH HOH . E 3 HOH A 39 249 65 HOH HOH . E 3 HOH A 40 250 66 HOH HOH . E 3 HOH A 41 251 67 HOH HOH . E 3 HOH A 42 252 68 HOH HOH . E 3 HOH A 43 253 69 HOH HOH . E 3 HOH A 44 254 72 HOH HOH . E 3 HOH A 45 255 73 HOH HOH . E 3 HOH A 46 256 82 HOH HOH . E 3 HOH A 47 257 90 HOH HOH . E 3 HOH A 48 258 91 HOH HOH . E 3 HOH A 49 259 92 HOH HOH . E 3 HOH A 50 260 93 HOH HOH . E 3 HOH A 51 261 94 HOH HOH . E 3 HOH A 52 262 97 HOH HOH . E 3 HOH A 53 263 98 HOH HOH . E 3 HOH A 54 264 99 HOH HOH . E 3 HOH A 55 265 100 HOH HOH . E 3 HOH A 56 266 101 HOH HOH . E 3 HOH A 57 267 103 HOH HOH . E 3 HOH A 58 268 104 HOH HOH . E 3 HOH A 59 269 115 HOH HOH . E 3 HOH A 60 270 117 HOH HOH . E 3 HOH A 61 271 127 HOH HOH . E 3 HOH A 62 272 128 HOH HOH . E 3 HOH A 63 273 129 HOH HOH . E 3 HOH A 64 274 130 HOH HOH . E 3 HOH A 65 275 131 HOH HOH . E 3 HOH A 66 276 132 HOH HOH . E 3 HOH A 67 277 133 HOH HOH . E 3 HOH A 68 278 134 HOH HOH . E 3 HOH A 69 279 135 HOH HOH . E 3 HOH A 70 280 137 HOH HOH . E 3 HOH A 71 281 138 HOH HOH . E 3 HOH A 72 282 139 HOH HOH . E 3 HOH A 73 283 140 HOH HOH . E 3 HOH A 74 284 141 HOH HOH . E 3 HOH A 75 285 142 HOH HOH . E 3 HOH A 76 286 143 HOH HOH . E 3 HOH A 77 287 146 HOH HOH . E 3 HOH A 78 288 147 HOH HOH . E 3 HOH A 79 289 152 HOH HOH . E 3 HOH A 80 290 153 HOH HOH . E 3 HOH A 81 291 154 HOH HOH . E 3 HOH A 82 292 156 HOH HOH . E 3 HOH A 83 293 159 HOH HOH . E 3 HOH A 84 294 160 HOH HOH . E 3 HOH A 85 295 161 HOH HOH . E 3 HOH A 86 296 163 HOH HOH . E 3 HOH A 87 297 164 HOH HOH . E 3 HOH A 88 298 165 HOH HOH . E 3 HOH A 89 299 167 HOH HOH . E 3 HOH A 90 300 169 HOH HOH . E 3 HOH A 91 301 170 HOH HOH . E 3 HOH A 92 302 171 HOH HOH . E 3 HOH A 93 303 172 HOH HOH . E 3 HOH A 94 304 184 HOH HOH . F 3 HOH B 1 211 10 HOH HOH . F 3 HOH B 2 212 13 HOH HOH . F 3 HOH B 3 213 14 HOH HOH . F 3 HOH B 4 214 21 HOH HOH . F 3 HOH B 5 215 22 HOH HOH . F 3 HOH B 6 216 23 HOH HOH . F 3 HOH B 7 217 25 HOH HOH . F 3 HOH B 8 218 26 HOH HOH . F 3 HOH B 9 219 27 HOH HOH . F 3 HOH B 10 220 28 HOH HOH . F 3 HOH B 11 221 29 HOH HOH . F 3 HOH B 12 222 35 HOH HOH . F 3 HOH B 13 223 37 HOH HOH . F 3 HOH B 14 224 40 HOH HOH . F 3 HOH B 15 225 44 HOH HOH . F 3 HOH B 16 226 48 HOH HOH . F 3 HOH B 17 227 49 HOH HOH . F 3 HOH B 18 228 50 HOH HOH . F 3 HOH B 19 229 51 HOH HOH . F 3 HOH B 20 230 52 HOH HOH . F 3 HOH B 21 231 53 HOH HOH . F 3 HOH B 22 232 54 HOH HOH . F 3 HOH B 23 233 55 HOH HOH . F 3 HOH B 24 234 56 HOH HOH . F 3 HOH B 25 235 57 HOH HOH . F 3 HOH B 26 236 58 HOH HOH . F 3 HOH B 27 237 70 HOH HOH . F 3 HOH B 28 238 71 HOH HOH . F 3 HOH B 29 239 74 HOH HOH . F 3 HOH B 30 240 75 HOH HOH . F 3 HOH B 31 241 76 HOH HOH . F 3 HOH B 32 242 77 HOH HOH . F 3 HOH B 33 243 78 HOH HOH . F 3 HOH B 34 244 79 HOH HOH . F 3 HOH B 35 245 80 HOH HOH . F 3 HOH B 36 246 81 HOH HOH . F 3 HOH B 37 247 83 HOH HOH . F 3 HOH B 38 248 84 HOH HOH . F 3 HOH B 39 249 85 HOH HOH . F 3 HOH B 40 250 86 HOH HOH . F 3 HOH B 41 251 87 HOH HOH . F 3 HOH B 42 252 88 HOH HOH . F 3 HOH B 43 253 89 HOH HOH . F 3 HOH B 44 254 95 HOH HOH . F 3 HOH B 45 255 96 HOH HOH . F 3 HOH B 46 256 102 HOH HOH . F 3 HOH B 47 257 105 HOH HOH . F 3 HOH B 48 258 106 HOH HOH . F 3 HOH B 49 259 107 HOH HOH . F 3 HOH B 50 260 108 HOH HOH . F 3 HOH B 51 261 109 HOH HOH . F 3 HOH B 52 262 110 HOH HOH . F 3 HOH B 53 263 111 HOH HOH . F 3 HOH B 54 264 112 HOH HOH . F 3 HOH B 55 265 113 HOH HOH . F 3 HOH B 56 266 114 HOH HOH . F 3 HOH B 57 267 116 HOH HOH . F 3 HOH B 58 268 118 HOH HOH . F 3 HOH B 59 269 119 HOH HOH . F 3 HOH B 60 270 120 HOH HOH . F 3 HOH B 61 271 121 HOH HOH . F 3 HOH B 62 272 122 HOH HOH . F 3 HOH B 63 273 123 HOH HOH . F 3 HOH B 64 274 124 HOH HOH . F 3 HOH B 65 275 125 HOH HOH . F 3 HOH B 66 276 126 HOH HOH . F 3 HOH B 67 277 136 HOH HOH . F 3 HOH B 68 278 144 HOH HOH . F 3 HOH B 69 279 145 HOH HOH . F 3 HOH B 70 280 148 HOH HOH . F 3 HOH B 71 281 149 HOH HOH . F 3 HOH B 72 282 150 HOH HOH . F 3 HOH B 73 283 151 HOH HOH . F 3 HOH B 74 284 155 HOH HOH . F 3 HOH B 75 285 157 HOH HOH . F 3 HOH B 76 286 158 HOH HOH . F 3 HOH B 77 287 162 HOH HOH . F 3 HOH B 78 288 166 HOH HOH . F 3 HOH B 79 289 168 HOH HOH . F 3 HOH B 80 290 173 HOH HOH . F 3 HOH B 81 291 174 HOH HOH . F 3 HOH B 82 292 175 HOH HOH . F 3 HOH B 83 293 176 HOH HOH . F 3 HOH B 84 294 177 HOH HOH . F 3 HOH B 85 295 178 HOH HOH . F 3 HOH B 86 296 179 HOH HOH . F 3 HOH B 87 297 180 HOH HOH . F 3 HOH B 88 298 181 HOH HOH . F 3 HOH B 89 299 182 HOH HOH . F 3 HOH B 90 300 183 HOH HOH . F 3 HOH B 91 301 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTX . . . D 2 59.636 23.626 6.439 1 12.77 ? N1 GTX 210 B 1 HETATM 2 C CA1 GTX . . . D 2 59.88 25.032 6.525 1 11.26 ? CA1 GTX 210 B 1 HETATM 3 C C1 GTX . . . D 2 61.397 25.076 6.521 1 10.55 ? C1 GTX 210 B 1 HETATM 4 O O11 GTX . . . D 2 62.047 24.128 6.981 1 8.76 ? O11 GTX 210 B 1 HETATM 5 O O12 GTX . . . D 2 61.913 26.009 5.929 1 9.06 ? O12 GTX 210 B 1 HETATM 6 C CB1 GTX . . . D 2 59.321 25.618 7.813 1 11.41 ? CB1 GTX 210 B 1 HETATM 7 C CG1 GTX . . . D 2 59.418 27.151 7.777 1 12.13 ? CG1 GTX 210 B 1 HETATM 8 C CD1 GTX . . . D 2 58.584 27.849 8.827 1 13.78 ? CD1 GTX 210 B 1 HETATM 9 O OE1 GTX . . . D 2 57.963 27.199 9.675 1 19.59 ? OE1 GTX 210 B 1 HETATM 10 N N2 GTX . . . D 2 58.533 29.18 8.718 1 16.92 ? N2 GTX 210 B 1 HETATM 11 C CA2 GTX . . . D 2 57.778 30.047 9.614 1 15.88 ? CA2 GTX 210 B 1 HETATM 12 C C2 GTX . . . D 2 57.119 31.11 8.75 1 14.42 ? C2 GTX 210 B 1 HETATM 13 O O2 GTX . . . D 2 57.664 31.497 7.709 1 17.42 ? O2 GTX 210 B 1 HETATM 14 C CB2 GTX . . . D 2 58.635 30.852 10.565 1 19.92 ? CB2 GTX 210 B 1 HETATM 15 S SG2 GTX . . . D 2 60.189 30.155 11.155 1 33.92 ? SG2 GTX 210 B 1 HETATM 16 C C1S GTX . . . D 2 59.915 30.429 12.917 1 30.26 ? C1S GTX 210 B 1 HETATM 17 C C2S GTX . . . D 2 60.159 31.866 13.389 1 30.48 ? C2S GTX 210 B 1 HETATM 18 C C3S GTX . . . D 2 58.831 32.564 13.49 1 26.48 ? C3S GTX 210 B 1 HETATM 19 C C4S GTX . . . D 2 58.816 33.735 14.437 1 30.87 ? C4S GTX 210 B 1 HETATM 20 C C5S GTX . . . D 2 57.828 34.781 13.944 1 32.11 ? C5S GTX 210 B 1 HETATM 21 C C6S GTX . . . D 2 56.523 34.2 13.358 1 31.73 ? C6S GTX 210 B 1 HETATM 22 N N3 GTX . . . D 2 56.008 31.633 9.233 1 12.97 ? N3 GTX 210 B 1 HETATM 23 C CA3 GTX . . . D 2 55.352 32.734 8.583 1 11.93 ? CA3 GTX 210 B 1 HETATM 24 C C3 GTX . . . D 2 53.977 32.296 8.155 1 15.46 ? C3 GTX 210 B 1 HETATM 25 O O31 GTX . . . D 2 53.184 33.159 7.826 1 17.56 ? O31 GTX 210 B 1 HETATM 26 O O32 GTX . . . D 2 53.67 31.103 8.163 1 17.66 ? O32 GTX 210 B 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #