data_2GMJ
#
_model_server_result.job_id            vvfLwyiM6uq1ezUSw3foaQ 
_model_server_result.datetime_utc      '2024-11-05 22:56:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gmj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":621}' 
#
_entry.id    2GMJ 
#
_exptl.entry_id    2GMJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              74.122 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TERTIARY-BUTYL ALCOHOL' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GMJ 
_cell.length_a            154.839 
_cell.length_b            154.839 
_cell.length_c            130.199 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GMJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        90 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 4 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,M 1 1 
B,I,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 K N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 528 A CYS 528 1_555 C FE2 SF4 . A SF4 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc2 A SG CYS 553 A CYS 553 1_555 C FE3 SF4 . A SF4 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc3 A SG CYS 556 A CYS 556 1_555 C FE4 SF4 . A SF4 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
metalc ? metalc4 B SG CYS 528 B CYS 528 1_555 I FE2 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc5 B SG CYS 553 B CYS 553 1_555 I FE3 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? 
metalc ? metalc6 B SG CYS 556 B CYS 556 1_555 I FE4 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc7 B SG CYS 559 B CYS 559 1_555 I FE1 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'C4 H10 O' 
_chem_comp.formula_weight    74.122 
_chem_comp.id                TBU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TERTIARY-BUTYL ALCOHOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     2-METHYL-2-PROPANOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O C TBU sing 393 n n 
O HO TBU sing 394 n n 
C C1 TBU sing 395 n n 
C C2 TBU sing 396 n n 
C C3 TBU sing 397 n n 
C1 H11 TBU sing 398 n n 
C1 H12 TBU sing 399 n n 
C1 H13 TBU sing 400 n n 
C2 H21 TBU sing 401 n n 
C2 H22 TBU sing 402 n n 
C2 H23 TBU sing 403 n n 
C3 H31 TBU sing 404 n n 
C3 H32 TBU sing 405 n n 
C3 H33 TBU sing 406 n n 
#
_atom_sites.entry_id                     2GMJ 
_atom_sites.fract_transf_matrix[1][1]    0.006458 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006458 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007681 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SF4 A 1 610 610 SF4 FS4 . 
D 3 FAD A 1 611 611 FAD FAD . 
E 4 TBU A 1 621 621 TBU TBU . 
F 4 TBU A 1 622 622 TBU TBU . 
G 4 TBU A 1 623 623 TBU TBU . 
H 4 TBU A 1 624 624 TBU TBU . 
I 2 SF4 B 1 612 610 SF4 FS4 . 
J 3 FAD B 1 613 611 FAD FAD . 
K 4 TBU B 1 625 625 TBU TBU . 
L 4 TBU B 1 626 626 TBU TBU . 
M 5 HOH A 1 701 701 HOH WAT . 
M 5 HOH A 2 702 702 HOH WAT . 
M 5 HOH A 3 703 703 HOH WAT . 
M 5 HOH A 4 704 704 HOH WAT . 
M 5 HOH A 5 705 705 HOH WAT . 
M 5 HOH A 6 706 706 HOH WAT . 
M 5 HOH A 7 707 707 HOH WAT . 
M 5 HOH A 8 708 708 HOH WAT . 
M 5 HOH A 9 709 709 HOH WAT . 
M 5 HOH A 10 710 710 HOH WAT . 
M 5 HOH A 11 711 711 HOH WAT . 
M 5 HOH A 12 712 712 HOH WAT . 
M 5 HOH A 13 713 713 HOH WAT . 
M 5 HOH A 14 714 714 HOH WAT . 
M 5 HOH A 15 715 715 HOH WAT . 
M 5 HOH A 16 716 716 HOH WAT . 
M 5 HOH A 17 717 717 HOH WAT . 
M 5 HOH A 18 718 718 HOH WAT . 
M 5 HOH A 19 719 719 HOH WAT . 
M 5 HOH A 20 720 720 HOH WAT . 
M 5 HOH A 21 721 721 HOH WAT . 
M 5 HOH A 22 722 722 HOH WAT . 
M 5 HOH A 23 723 723 HOH WAT . 
M 5 HOH A 24 724 724 HOH WAT . 
M 5 HOH A 25 725 725 HOH WAT . 
M 5 HOH A 26 726 726 HOH WAT . 
M 5 HOH A 27 727 727 HOH WAT . 
M 5 HOH A 28 728 728 HOH WAT . 
M 5 HOH A 29 733 733 HOH WAT . 
M 5 HOH A 30 734 734 HOH WAT . 
M 5 HOH A 31 735 735 HOH WAT . 
M 5 HOH A 32 736 736 HOH WAT . 
M 5 HOH A 33 737 737 HOH WAT . 
M 5 HOH A 34 738 738 HOH WAT . 
M 5 HOH A 35 739 739 HOH WAT . 
M 5 HOH A 36 740 740 HOH WAT . 
M 5 HOH A 37 741 741 HOH WAT . 
M 5 HOH A 38 742 742 HOH WAT . 
M 5 HOH A 39 743 743 HOH WAT . 
M 5 HOH A 40 744 744 HOH WAT . 
M 5 HOH A 41 745 745 HOH WAT . 
M 5 HOH A 42 746 746 HOH WAT . 
M 5 HOH A 43 747 747 HOH WAT . 
M 5 HOH A 44 748 748 HOH WAT . 
M 5 HOH A 45 749 749 HOH WAT . 
M 5 HOH A 46 750 750 HOH WAT . 
M 5 HOH A 47 751 751 HOH WAT . 
M 5 HOH A 48 752 752 HOH WAT . 
M 5 HOH A 49 753 753 HOH WAT . 
M 5 HOH A 50 754 754 HOH WAT . 
M 5 HOH A 51 755 755 HOH WAT . 
M 5 HOH A 52 756 756 HOH WAT . 
M 5 HOH A 53 757 757 HOH WAT . 
M 5 HOH A 54 758 758 HOH WAT . 
M 5 HOH A 55 759 759 HOH WAT . 
M 5 HOH A 56 760 760 HOH WAT . 
M 5 HOH A 57 774 774 HOH WAT . 
M 5 HOH A 58 788 788 HOH WAT . 
M 5 HOH A 59 789 789 HOH WAT . 
M 5 HOH A 60 790 790 HOH WAT . 
M 5 HOH A 61 791 791 HOH WAT . 
M 5 HOH A 62 792 792 HOH WAT . 
M 5 HOH A 63 793 793 HOH WAT . 
M 5 HOH A 64 794 794 HOH WAT . 
M 5 HOH A 65 795 795 HOH WAT . 
M 5 HOH A 66 796 796 HOH WAT . 
M 5 HOH A 67 797 797 HOH WAT . 
M 5 HOH A 68 798 798 HOH WAT . 
M 5 HOH A 69 799 799 HOH WAT . 
M 5 HOH A 70 800 800 HOH WAT . 
M 5 HOH A 71 801 801 HOH WAT . 
M 5 HOH A 72 803 803 HOH WAT . 
M 5 HOH A 73 804 804 HOH WAT . 
M 5 HOH A 74 805 805 HOH WAT . 
M 5 HOH A 75 806 806 HOH WAT . 
M 5 HOH A 76 807 807 HOH WAT . 
M 5 HOH A 77 809 809 HOH WAT . 
N 5 HOH B 1 729 729 HOH WAT . 
N 5 HOH B 2 730 730 HOH WAT . 
N 5 HOH B 3 731 731 HOH WAT . 
N 5 HOH B 4 732 732 HOH WAT . 
N 5 HOH B 5 761 761 HOH WAT . 
N 5 HOH B 6 762 762 HOH WAT . 
N 5 HOH B 7 763 763 HOH WAT . 
N 5 HOH B 8 764 764 HOH WAT . 
N 5 HOH B 9 765 765 HOH WAT . 
N 5 HOH B 10 766 766 HOH WAT . 
N 5 HOH B 11 767 767 HOH WAT . 
N 5 HOH B 12 768 768 HOH WAT . 
N 5 HOH B 13 769 769 HOH WAT . 
N 5 HOH B 14 770 770 HOH WAT . 
N 5 HOH B 15 771 771 HOH WAT . 
N 5 HOH B 16 772 772 HOH WAT . 
N 5 HOH B 17 773 773 HOH WAT . 
N 5 HOH B 18 775 775 HOH WAT . 
N 5 HOH B 19 776 776 HOH WAT . 
N 5 HOH B 20 777 777 HOH WAT . 
N 5 HOH B 21 778 778 HOH WAT . 
N 5 HOH B 22 779 779 HOH WAT . 
N 5 HOH B 23 780 780 HOH WAT . 
N 5 HOH B 24 781 781 HOH WAT . 
N 5 HOH B 25 782 782 HOH WAT . 
N 5 HOH B 26 783 783 HOH WAT . 
N 5 HOH B 27 784 784 HOH WAT . 
N 5 HOH B 28 785 785 HOH WAT . 
N 5 HOH B 29 786 786 HOH WAT . 
N 5 HOH B 30 787 787 HOH WAT . 
N 5 HOH B 31 802 802 HOH WAT . 
N 5 HOH B 32 808 808 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O TBU . . . E 4 59.253 21.685 73.504 1 28.33 ? O TBU 621 A 1 
HETATM 2 C C TBU . . . E 4 57.892 21.812 73.894 1 27.13 ? C TBU 621 A 1 
HETATM 3 C C1 TBU . . . E 4 57.174 22.74 72.92 1 25.4 ? C1 TBU 621 A 1 
HETATM 4 C C2 TBU . . . E 4 57.809 22.383 75.301 1 26.82 ? C2 TBU 621 A 1 
HETATM 5 C C3 TBU . . . E 4 57.233 20.442 73.837 1 25.74 ? C3 TBU 621 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           367 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#