data_2GMJ # _model_server_result.job_id TtBC9NJBtqsq6Fnr8VMCCg _model_server_result.datetime_utc '2024-11-05 22:56:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gmj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":622}' # _entry.id 2GMJ # _exptl.entry_id 2GMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 74.122 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TERTIARY-BUTYL ALCOHOL' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2GMJ _cell.length_a 154.839 _cell.length_b 154.839 _cell.length_c 130.199 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,M 1 1 B,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 528 A CYS 528 1_555 C FE2 SF4 . A SF4 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc2 A SG CYS 553 A CYS 553 1_555 C FE3 SF4 . A SF4 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc3 A SG CYS 556 A CYS 556 1_555 C FE4 SF4 . A SF4 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc4 B SG CYS 528 B CYS 528 1_555 I FE2 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc5 B SG CYS 553 B CYS 553 1_555 I FE3 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc6 B SG CYS 556 B CYS 556 1_555 I FE4 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc7 B SG CYS 559 B CYS 559 1_555 I FE1 SF4 . B SF4 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? # _chem_comp.formula 'C4 H10 O' _chem_comp.formula_weight 74.122 _chem_comp.id TBU _chem_comp.mon_nstd_flag . _chem_comp.name 'TERTIARY-BUTYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-METHYL-2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C TBU sing 393 n n O HO TBU sing 394 n n C C1 TBU sing 395 n n C C2 TBU sing 396 n n C C3 TBU sing 397 n n C1 H11 TBU sing 398 n n C1 H12 TBU sing 399 n n C1 H13 TBU sing 400 n n C2 H21 TBU sing 401 n n C2 H22 TBU sing 402 n n C2 H23 TBU sing 403 n n C3 H31 TBU sing 404 n n C3 H32 TBU sing 405 n n C3 H33 TBU sing 406 n n # _atom_sites.entry_id 2GMJ _atom_sites.fract_transf_matrix[1][1] 0.006458 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 610 610 SF4 FS4 . D 3 FAD A 1 611 611 FAD FAD . E 4 TBU A 1 621 621 TBU TBU . F 4 TBU A 1 622 622 TBU TBU . G 4 TBU A 1 623 623 TBU TBU . H 4 TBU A 1 624 624 TBU TBU . I 2 SF4 B 1 612 610 SF4 FS4 . J 3 FAD B 1 613 611 FAD FAD . K 4 TBU B 1 625 625 TBU TBU . L 4 TBU B 1 626 626 TBU TBU . M 5 HOH A 1 701 701 HOH WAT . M 5 HOH A 2 702 702 HOH WAT . M 5 HOH A 3 703 703 HOH WAT . M 5 HOH A 4 704 704 HOH WAT . M 5 HOH A 5 705 705 HOH WAT . M 5 HOH A 6 706 706 HOH WAT . M 5 HOH A 7 707 707 HOH WAT . M 5 HOH A 8 708 708 HOH WAT . M 5 HOH A 9 709 709 HOH WAT . M 5 HOH A 10 710 710 HOH WAT . M 5 HOH A 11 711 711 HOH WAT . M 5 HOH A 12 712 712 HOH WAT . M 5 HOH A 13 713 713 HOH WAT . M 5 HOH A 14 714 714 HOH WAT . M 5 HOH A 15 715 715 HOH WAT . M 5 HOH A 16 716 716 HOH WAT . M 5 HOH A 17 717 717 HOH WAT . M 5 HOH A 18 718 718 HOH WAT . M 5 HOH A 19 719 719 HOH WAT . M 5 HOH A 20 720 720 HOH WAT . M 5 HOH A 21 721 721 HOH WAT . M 5 HOH A 22 722 722 HOH WAT . M 5 HOH A 23 723 723 HOH WAT . M 5 HOH A 24 724 724 HOH WAT . M 5 HOH A 25 725 725 HOH WAT . M 5 HOH A 26 726 726 HOH WAT . M 5 HOH A 27 727 727 HOH WAT . M 5 HOH A 28 728 728 HOH WAT . M 5 HOH A 29 733 733 HOH WAT . M 5 HOH A 30 734 734 HOH WAT . M 5 HOH A 31 735 735 HOH WAT . M 5 HOH A 32 736 736 HOH WAT . M 5 HOH A 33 737 737 HOH WAT . M 5 HOH A 34 738 738 HOH WAT . M 5 HOH A 35 739 739 HOH WAT . M 5 HOH A 36 740 740 HOH WAT . M 5 HOH A 37 741 741 HOH WAT . M 5 HOH A 38 742 742 HOH WAT . M 5 HOH A 39 743 743 HOH WAT . M 5 HOH A 40 744 744 HOH WAT . M 5 HOH A 41 745 745 HOH WAT . M 5 HOH A 42 746 746 HOH WAT . M 5 HOH A 43 747 747 HOH WAT . M 5 HOH A 44 748 748 HOH WAT . M 5 HOH A 45 749 749 HOH WAT . M 5 HOH A 46 750 750 HOH WAT . M 5 HOH A 47 751 751 HOH WAT . M 5 HOH A 48 752 752 HOH WAT . M 5 HOH A 49 753 753 HOH WAT . M 5 HOH A 50 754 754 HOH WAT . M 5 HOH A 51 755 755 HOH WAT . M 5 HOH A 52 756 756 HOH WAT . M 5 HOH A 53 757 757 HOH WAT . M 5 HOH A 54 758 758 HOH WAT . M 5 HOH A 55 759 759 HOH WAT . M 5 HOH A 56 760 760 HOH WAT . M 5 HOH A 57 774 774 HOH WAT . M 5 HOH A 58 788 788 HOH WAT . M 5 HOH A 59 789 789 HOH WAT . M 5 HOH A 60 790 790 HOH WAT . M 5 HOH A 61 791 791 HOH WAT . M 5 HOH A 62 792 792 HOH WAT . M 5 HOH A 63 793 793 HOH WAT . M 5 HOH A 64 794 794 HOH WAT . M 5 HOH A 65 795 795 HOH WAT . M 5 HOH A 66 796 796 HOH WAT . M 5 HOH A 67 797 797 HOH WAT . M 5 HOH A 68 798 798 HOH WAT . M 5 HOH A 69 799 799 HOH WAT . M 5 HOH A 70 800 800 HOH WAT . M 5 HOH A 71 801 801 HOH WAT . M 5 HOH A 72 803 803 HOH WAT . M 5 HOH A 73 804 804 HOH WAT . M 5 HOH A 74 805 805 HOH WAT . M 5 HOH A 75 806 806 HOH WAT . M 5 HOH A 76 807 807 HOH WAT . M 5 HOH A 77 809 809 HOH WAT . N 5 HOH B 1 729 729 HOH WAT . N 5 HOH B 2 730 730 HOH WAT . N 5 HOH B 3 731 731 HOH WAT . N 5 HOH B 4 732 732 HOH WAT . N 5 HOH B 5 761 761 HOH WAT . N 5 HOH B 6 762 762 HOH WAT . N 5 HOH B 7 763 763 HOH WAT . N 5 HOH B 8 764 764 HOH WAT . N 5 HOH B 9 765 765 HOH WAT . N 5 HOH B 10 766 766 HOH WAT . N 5 HOH B 11 767 767 HOH WAT . N 5 HOH B 12 768 768 HOH WAT . N 5 HOH B 13 769 769 HOH WAT . N 5 HOH B 14 770 770 HOH WAT . N 5 HOH B 15 771 771 HOH WAT . N 5 HOH B 16 772 772 HOH WAT . N 5 HOH B 17 773 773 HOH WAT . N 5 HOH B 18 775 775 HOH WAT . N 5 HOH B 19 776 776 HOH WAT . N 5 HOH B 20 777 777 HOH WAT . N 5 HOH B 21 778 778 HOH WAT . N 5 HOH B 22 779 779 HOH WAT . N 5 HOH B 23 780 780 HOH WAT . N 5 HOH B 24 781 781 HOH WAT . N 5 HOH B 25 782 782 HOH WAT . N 5 HOH B 26 783 783 HOH WAT . N 5 HOH B 27 784 784 HOH WAT . N 5 HOH B 28 785 785 HOH WAT . N 5 HOH B 29 786 786 HOH WAT . N 5 HOH B 30 787 787 HOH WAT . N 5 HOH B 31 802 802 HOH WAT . N 5 HOH B 32 808 808 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O TBU . . . F 4 61.876 17.757 74.558 1 28.82 ? O TBU 622 A 1 HETATM 2 C C TBU . . . F 4 62.101 17.855 75.968 1 27.77 ? C TBU 622 A 1 HETATM 3 C C1 TBU . . . F 4 62.692 19.227 76.306 1 26.24 ? C1 TBU 622 A 1 HETATM 4 C C2 TBU . . . F 4 63.046 16.759 76.398 1 28.34 ? C2 TBU 622 A 1 HETATM 5 C C3 TBU . . . F 4 60.796 17.703 76.71 1 28.39 ? C3 TBU 622 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 5 #