data_2GMR # _model_server_result.job_id FAKLKLJkTufNYAhy99rb9w _model_server_result.datetime_utc '2024-11-07 00:29:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2gmr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":308}' # _entry.id 2GMR # _exptl.entry_id 2GMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2GMR _cell.length_a 76.85 _cell.length_b 134.72 _cell.length_c 141.64 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2GMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 153 L HIS 153 1_555 F MG BCL . L BCL 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc2 A NE2 HIS 173 L HIS 173 1_555 E MG BCL . L BCL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A NE2 HIS 190 L HIS 190 1_555 J FE FE2 . M FE2 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 A NE2 HIS 230 L HIS 230 1_555 J FE FE2 . M FE2 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc5 D MG BCL . L BCL 301 1_555 B NE2 HIS 182 M HIS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc6 B NE2 HIS 202 M HIS 202 1_555 K MG BCL . M BCL 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc7 B NE2 HIS 219 M HIS 219 1_555 J FE FE2 . M FE2 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc8 B OE1 GLU 234 M GLU 234 1_555 J FE FE2 . M FE2 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc9 B OE2 GLU 234 M GLU 234 1_555 J FE FE2 . M FE2 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc10 B NE2 HIS 266 M HIS 266 1_555 J FE FE2 . M FE2 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2GMR _atom_sites.fract_transf_matrix[1][1] 0.013012 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007423 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BCL L 1 301 301 BCL BCL . E 4 BCL L 1 302 302 BCL BCL . F 4 BCL L 1 304 304 BCL BCL . G 5 BPH L 1 305 206 BPH BPH . H 6 U10 L 1 306 209 U10 U10 . I 7 LDA L 1 307 213 LDA LDA . J 8 FE2 M 1 308 207 FE2 FE2 . K 4 BCL M 1 309 303 BCL BCL . L 5 BPH M 1 310 205 BPH BPH . M 6 U10 M 1 311 208 U10 U10 . N 9 SPN M 1 312 210 SPN SPN . O 7 LDA M 1 313 211 LDA LDA . P 7 LDA M 1 314 212 LDA LDA . Q 7 LDA H 1 261 214 LDA LDA . R 10 HOH L 1 308 1 HOH HOH . R 10 HOH L 2 309 2 HOH HOH . R 10 HOH L 3 310 7 HOH HOH . R 10 HOH L 4 311 8 HOH HOH . R 10 HOH L 5 312 9 HOH HOH . R 10 HOH L 6 313 21 HOH HOH . R 10 HOH L 7 314 23 HOH HOH . R 10 HOH L 8 315 24 HOH HOH . R 10 HOH L 9 316 33 HOH HOH . R 10 HOH L 10 317 52 HOH HOH . R 10 HOH L 11 318 53 HOH HOH . R 10 HOH L 12 319 66 HOH HOH . R 10 HOH L 13 320 69 HOH HOH . R 10 HOH L 14 321 70 HOH HOH . R 10 HOH L 15 322 71 HOH HOH . R 10 HOH L 16 323 77 HOH HOH . R 10 HOH L 17 324 83 HOH HOH . R 10 HOH L 18 325 84 HOH HOH . R 10 HOH L 19 326 92 HOH HOH . R 10 HOH L 20 327 93 HOH HOH . R 10 HOH L 21 328 96 HOH HOH . R 10 HOH L 22 329 98 HOH HOH . R 10 HOH L 23 330 99 HOH HOH . R 10 HOH L 24 331 102 HOH HOH . R 10 HOH L 25 332 104 HOH HOH . R 10 HOH L 26 333 106 HOH HOH . R 10 HOH L 27 334 107 HOH HOH . R 10 HOH L 28 335 108 HOH HOH . R 10 HOH L 29 336 118 HOH HOH . R 10 HOH L 30 337 119 HOH HOH . R 10 HOH L 31 338 120 HOH HOH . R 10 HOH L 32 339 122 HOH HOH . R 10 HOH L 33 340 127 HOH HOH . R 10 HOH L 34 341 131 HOH HOH . R 10 HOH L 35 342 137 HOH HOH . R 10 HOH L 36 343 153 HOH HOH . R 10 HOH L 37 344 154 HOH HOH . R 10 HOH L 38 345 161 HOH HOH . R 10 HOH L 39 346 163 HOH HOH . R 10 HOH L 40 347 168 HOH HOH . R 10 HOH L 41 348 174 HOH HOH . R 10 HOH L 42 349 175 HOH HOH . R 10 HOH L 43 350 177 HOH HOH . R 10 HOH L 44 351 179 HOH HOH . R 10 HOH L 45 352 180 HOH HOH . S 10 HOH M 1 315 3 HOH HOH . S 10 HOH M 2 316 4 HOH HOH . S 10 HOH M 3 317 5 HOH HOH . S 10 HOH M 4 318 6 HOH HOH . S 10 HOH M 5 319 10 HOH HOH . S 10 HOH M 6 320 11 HOH HOH . S 10 HOH M 7 321 12 HOH HOH . S 10 HOH M 8 322 13 HOH HOH . S 10 HOH M 9 323 14 HOH HOH . S 10 HOH M 10 324 15 HOH HOH . S 10 HOH M 11 325 16 HOH HOH . S 10 HOH M 12 326 17 HOH HOH . S 10 HOH M 13 327 20 HOH HOH . S 10 HOH M 14 328 22 HOH HOH . S 10 HOH M 15 329 26 HOH HOH . S 10 HOH M 16 330 27 HOH HOH . S 10 HOH M 17 331 28 HOH HOH . S 10 HOH M 18 332 30 HOH HOH . S 10 HOH M 19 333 31 HOH HOH . S 10 HOH M 20 334 32 HOH HOH . S 10 HOH M 21 335 36 HOH HOH . S 10 HOH M 22 336 48 HOH HOH . S 10 HOH M 23 337 50 HOH HOH . S 10 HOH M 24 338 51 HOH HOH . S 10 HOH M 25 339 54 HOH HOH . S 10 HOH M 26 340 65 HOH HOH . S 10 HOH M 27 341 67 HOH HOH . S 10 HOH M 28 342 68 HOH HOH . S 10 HOH M 29 343 72 HOH HOH . S 10 HOH M 30 344 73 HOH HOH . S 10 HOH M 31 345 78 HOH HOH . S 10 HOH M 32 346 79 HOH HOH . S 10 HOH M 33 347 80 HOH HOH . S 10 HOH M 34 348 81 HOH HOH . S 10 HOH M 35 349 82 HOH HOH . S 10 HOH M 36 350 85 HOH HOH . S 10 HOH M 37 351 86 HOH HOH . S 10 HOH M 38 352 87 HOH HOH . S 10 HOH M 39 353 88 HOH HOH . S 10 HOH M 40 354 90 HOH HOH . S 10 HOH M 41 355 91 HOH HOH . S 10 HOH M 42 356 100 HOH HOH . S 10 HOH M 43 357 101 HOH HOH . S 10 HOH M 44 358 109 HOH HOH . S 10 HOH M 45 359 110 HOH HOH . S 10 HOH M 46 360 112 HOH HOH . S 10 HOH M 47 361 114 HOH HOH . S 10 HOH M 48 362 129 HOH HOH . S 10 HOH M 49 363 130 HOH HOH . S 10 HOH M 50 364 132 HOH HOH . S 10 HOH M 51 365 134 HOH HOH . S 10 HOH M 52 366 138 HOH HOH . S 10 HOH M 53 367 142 HOH HOH . S 10 HOH M 54 368 144 HOH HOH . S 10 HOH M 55 369 145 HOH HOH . S 10 HOH M 56 370 146 HOH HOH . S 10 HOH M 57 371 150 HOH HOH . S 10 HOH M 58 372 157 HOH HOH . S 10 HOH M 59 373 158 HOH HOH . S 10 HOH M 60 374 159 HOH HOH . S 10 HOH M 61 375 160 HOH HOH . S 10 HOH M 62 376 164 HOH HOH . S 10 HOH M 63 377 165 HOH HOH . S 10 HOH M 64 378 167 HOH HOH . S 10 HOH M 65 379 178 HOH HOH . T 10 HOH H 1 262 18 HOH HOH . T 10 HOH H 2 263 19 HOH HOH . T 10 HOH H 3 264 25 HOH HOH . T 10 HOH H 4 265 29 HOH HOH . T 10 HOH H 5 266 34 HOH HOH . T 10 HOH H 6 267 35 HOH HOH . T 10 HOH H 7 268 37 HOH HOH . T 10 HOH H 8 269 38 HOH HOH . T 10 HOH H 9 270 39 HOH HOH . T 10 HOH H 10 271 40 HOH HOH . T 10 HOH H 11 272 41 HOH HOH . T 10 HOH H 12 273 42 HOH HOH . T 10 HOH H 13 274 43 HOH HOH . T 10 HOH H 14 275 44 HOH HOH . T 10 HOH H 15 276 45 HOH HOH . T 10 HOH H 16 277 46 HOH HOH . T 10 HOH H 17 278 47 HOH HOH . T 10 HOH H 18 279 49 HOH HOH . T 10 HOH H 19 280 55 HOH HOH . T 10 HOH H 20 281 56 HOH HOH . T 10 HOH H 21 282 57 HOH HOH . T 10 HOH H 22 283 58 HOH HOH . T 10 HOH H 23 284 59 HOH HOH . T 10 HOH H 24 285 60 HOH HOH . T 10 HOH H 25 286 61 HOH HOH . T 10 HOH H 26 287 62 HOH HOH . T 10 HOH H 27 288 63 HOH HOH . T 10 HOH H 28 289 64 HOH HOH . T 10 HOH H 29 290 74 HOH HOH . T 10 HOH H 30 291 75 HOH HOH . T 10 HOH H 31 292 76 HOH HOH . T 10 HOH H 32 293 89 HOH HOH . T 10 HOH H 33 294 94 HOH HOH . T 10 HOH H 34 295 95 HOH HOH . T 10 HOH H 35 296 97 HOH HOH . T 10 HOH H 36 297 103 HOH HOH . T 10 HOH H 37 298 105 HOH HOH . T 10 HOH H 38 299 111 HOH HOH . T 10 HOH H 39 300 113 HOH HOH . T 10 HOH H 40 301 115 HOH HOH . T 10 HOH H 41 302 116 HOH HOH . T 10 HOH H 42 303 117 HOH HOH . T 10 HOH H 43 304 121 HOH HOH . T 10 HOH H 44 305 123 HOH HOH . T 10 HOH H 45 306 124 HOH HOH . T 10 HOH H 46 307 125 HOH HOH . T 10 HOH H 47 308 126 HOH HOH . T 10 HOH H 48 309 128 HOH HOH . T 10 HOH H 49 310 133 HOH HOH . T 10 HOH H 50 311 135 HOH HOH . T 10 HOH H 51 312 136 HOH HOH . T 10 HOH H 52 313 139 HOH HOH . T 10 HOH H 53 314 140 HOH HOH . T 10 HOH H 54 315 141 HOH HOH . T 10 HOH H 55 316 143 HOH HOH . T 10 HOH H 56 317 147 HOH HOH . T 10 HOH H 57 318 148 HOH HOH . T 10 HOH H 58 319 149 HOH HOH . T 10 HOH H 59 320 151 HOH HOH . T 10 HOH H 60 321 152 HOH HOH . T 10 HOH H 61 322 155 HOH HOH . T 10 HOH H 62 323 156 HOH HOH . T 10 HOH H 63 324 162 HOH HOH . T 10 HOH H 64 325 166 HOH HOH . T 10 HOH H 65 326 169 HOH HOH . T 10 HOH H 66 327 170 HOH HOH . T 10 HOH H 67 328 171 HOH HOH . T 10 HOH H 68 329 172 HOH HOH . T 10 HOH H 69 330 173 HOH HOH . T 10 HOH H 70 331 176 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 8 _atom_site.Cartn_x 28.648 _atom_site.Cartn_y 1.922 _atom_site.Cartn_z 30.277 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.65 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 308 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #