data_2GP7
#
_model_server_result.job_id            E1_iBeH9AlslGDCuofHUvA 
_model_server_result.datetime_utc      '2024-11-25 12:39:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gp7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":600}' 
#
_entry.id    2GP7 
#
_exptl.entry_id    2GP7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2GP7 
_cell.length_a            60.388 
_cell.length_b            80.369 
_cell.length_c            211.22 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GP7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G 1 1 
C,D,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O VAL 15 A VAL 243 1_555 E CA CA . A CA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc2 A O GLU 17 A GLU 245 1_555 E CA CA . A CA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc3 A OE1 GLU 158 A GLU 386 4_455 E CA CA . A CA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc4 A OE2 GLU 158 A GLU 386 4_455 E CA CA . A CA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2GP7 
_atom_sites.fract_transf_matrix[1][1]    0.01656 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01244 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00473 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CA A 1 600 600 CA CA . 
F 3 HOH A 1 601 1 HOH HOH . 
F 3 HOH A 2 602 3 HOH HOH . 
F 3 HOH A 3 603 4 HOH HOH . 
F 3 HOH A 4 604 6 HOH HOH . 
F 3 HOH A 5 605 9 HOH HOH . 
F 3 HOH A 6 606 10 HOH HOH . 
F 3 HOH A 7 607 12 HOH HOH . 
F 3 HOH A 8 608 15 HOH HOH . 
F 3 HOH A 9 609 17 HOH HOH . 
F 3 HOH A 10 610 20 HOH HOH . 
F 3 HOH A 11 611 21 HOH HOH . 
F 3 HOH A 12 612 29 HOH HOH . 
F 3 HOH A 13 613 36 HOH HOH . 
F 3 HOH A 14 614 44 HOH HOH . 
F 3 HOH A 15 615 56 HOH HOH . 
F 3 HOH A 16 616 65 HOH HOH . 
F 3 HOH A 17 617 80 HOH HOH . 
F 3 HOH A 18 618 86 HOH HOH . 
F 3 HOH A 19 619 93 HOH HOH . 
F 3 HOH A 20 620 99 HOH HOH . 
F 3 HOH A 21 621 106 HOH HOH . 
F 3 HOH A 22 622 120 HOH HOH . 
F 3 HOH A 23 623 133 HOH HOH . 
F 3 HOH A 24 624 135 HOH HOH . 
F 3 HOH A 25 625 150 HOH HOH . 
F 3 HOH A 26 626 178 HOH HOH . 
F 3 HOH A 27 627 194 HOH HOH . 
F 3 HOH A 28 628 201 HOH HOH . 
F 3 HOH A 29 629 221 HOH HOH . 
F 3 HOH A 30 630 315 HOH HOH . 
F 3 HOH A 31 631 352 HOH HOH . 
F 3 HOH A 32 632 354 HOH HOH . 
F 3 HOH A 33 633 357 HOH HOH . 
F 3 HOH A 34 634 365 HOH HOH . 
F 3 HOH A 35 635 366 HOH HOH . 
F 3 HOH A 36 636 369 HOH HOH . 
F 3 HOH A 37 637 376 HOH HOH . 
F 3 HOH A 38 638 388 HOH HOH . 
F 3 HOH A 39 639 390 HOH HOH . 
F 3 HOH A 40 640 393 HOH HOH . 
F 3 HOH A 41 641 396 HOH HOH . 
F 3 HOH A 42 642 400 HOH HOH . 
F 3 HOH A 43 643 412 HOH HOH . 
F 3 HOH A 44 644 424 HOH HOH . 
F 3 HOH A 45 645 428 HOH HOH . 
F 3 HOH A 46 646 435 HOH HOH . 
F 3 HOH A 47 647 436 HOH HOH . 
F 3 HOH A 48 648 448 HOH HOH . 
F 3 HOH A 49 649 450 HOH HOH . 
F 3 HOH A 50 650 451 HOH HOH . 
F 3 HOH A 51 651 466 HOH HOH . 
F 3 HOH A 52 652 477 HOH HOH . 
F 3 HOH A 53 653 485 HOH HOH . 
F 3 HOH A 54 654 496 HOH HOH . 
F 3 HOH A 55 655 499 HOH HOH . 
F 3 HOH A 56 656 506 HOH HOH . 
F 3 HOH A 57 657 507 HOH HOH . 
F 3 HOH A 58 658 509 HOH HOH . 
F 3 HOH A 59 659 527 HOH HOH . 
F 3 HOH A 60 660 533 HOH HOH . 
F 3 HOH A 61 661 541 HOH HOH . 
F 3 HOH A 62 662 542 HOH HOH . 
F 3 HOH A 63 663 544 HOH HOH . 
F 3 HOH A 64 664 545 HOH HOH . 
F 3 HOH A 65 665 548 HOH HOH . 
F 3 HOH A 66 666 552 HOH HOH . 
F 3 HOH A 67 667 563 HOH HOH . 
F 3 HOH A 68 668 566 HOH HOH . 
F 3 HOH A 69 669 567 HOH HOH . 
F 3 HOH A 70 670 568 HOH HOH . 
F 3 HOH A 71 671 569 HOH HOH . 
G 3 HOH B 1 459 5 HOH HOH . 
G 3 HOH B 2 460 7 HOH HOH . 
G 3 HOH B 3 461 13 HOH HOH . 
G 3 HOH B 4 462 16 HOH HOH . 
G 3 HOH B 5 463 18 HOH HOH . 
G 3 HOH B 6 464 24 HOH HOH . 
G 3 HOH B 7 465 25 HOH HOH . 
G 3 HOH B 8 466 34 HOH HOH . 
G 3 HOH B 9 467 46 HOH HOH . 
G 3 HOH B 10 468 47 HOH HOH . 
G 3 HOH B 11 469 50 HOH HOH . 
G 3 HOH B 12 470 61 HOH HOH . 
G 3 HOH B 13 471 69 HOH HOH . 
G 3 HOH B 14 472 70 HOH HOH . 
G 3 HOH B 15 473 74 HOH HOH . 
G 3 HOH B 16 474 90 HOH HOH . 
G 3 HOH B 17 475 92 HOH HOH . 
G 3 HOH B 18 476 94 HOH HOH . 
G 3 HOH B 19 477 97 HOH HOH . 
G 3 HOH B 20 478 100 HOH HOH . 
G 3 HOH B 21 479 101 HOH HOH . 
G 3 HOH B 22 480 102 HOH HOH . 
G 3 HOH B 23 481 117 HOH HOH . 
G 3 HOH B 24 482 140 HOH HOH . 
G 3 HOH B 25 483 142 HOH HOH . 
G 3 HOH B 26 484 149 HOH HOH . 
G 3 HOH B 27 485 159 HOH HOH . 
G 3 HOH B 28 486 168 HOH HOH . 
G 3 HOH B 29 487 173 HOH HOH . 
G 3 HOH B 30 488 177 HOH HOH . 
G 3 HOH B 31 489 210 HOH HOH . 
G 3 HOH B 32 490 253 HOH HOH . 
G 3 HOH B 33 491 290 HOH HOH . 
G 3 HOH B 34 492 294 HOH HOH . 
G 3 HOH B 35 493 325 HOH HOH . 
G 3 HOH B 36 494 338 HOH HOH . 
G 3 HOH B 37 495 342 HOH HOH . 
G 3 HOH B 38 496 349 HOH HOH . 
G 3 HOH B 39 497 350 HOH HOH . 
G 3 HOH B 40 498 353 HOH HOH . 
G 3 HOH B 41 499 355 HOH HOH . 
G 3 HOH B 42 500 359 HOH HOH . 
G 3 HOH B 43 501 363 HOH HOH . 
G 3 HOH B 44 502 364 HOH HOH . 
G 3 HOH B 45 503 367 HOH HOH . 
G 3 HOH B 46 504 371 HOH HOH . 
G 3 HOH B 47 505 372 HOH HOH . 
G 3 HOH B 48 506 375 HOH HOH . 
G 3 HOH B 49 507 378 HOH HOH . 
G 3 HOH B 50 508 383 HOH HOH . 
G 3 HOH B 51 509 397 HOH HOH . 
G 3 HOH B 52 510 402 HOH HOH . 
G 3 HOH B 53 511 404 HOH HOH . 
G 3 HOH B 54 512 405 HOH HOH . 
G 3 HOH B 55 513 414 HOH HOH . 
G 3 HOH B 56 514 416 HOH HOH . 
G 3 HOH B 57 515 422 HOH HOH . 
G 3 HOH B 58 516 432 HOH HOH . 
G 3 HOH B 59 517 434 HOH HOH . 
G 3 HOH B 60 518 449 HOH HOH . 
G 3 HOH B 61 519 456 HOH HOH . 
G 3 HOH B 62 520 458 HOH HOH . 
G 3 HOH B 63 521 469 HOH HOH . 
G 3 HOH B 64 522 475 HOH HOH . 
G 3 HOH B 65 523 481 HOH HOH . 
G 3 HOH B 66 524 482 HOH HOH . 
G 3 HOH B 67 525 484 HOH HOH . 
G 3 HOH B 68 526 493 HOH HOH . 
G 3 HOH B 69 527 495 HOH HOH . 
G 3 HOH B 70 528 498 HOH HOH . 
G 3 HOH B 71 529 502 HOH HOH . 
G 3 HOH B 72 530 504 HOH HOH . 
G 3 HOH B 73 531 508 HOH HOH . 
G 3 HOH B 74 532 514 HOH HOH . 
G 3 HOH B 75 533 518 HOH HOH . 
G 3 HOH B 76 534 521 HOH HOH . 
G 3 HOH B 77 535 528 HOH HOH . 
G 3 HOH B 78 536 537 HOH HOH . 
G 3 HOH B 79 537 538 HOH HOH . 
G 3 HOH B 80 538 553 HOH HOH . 
G 3 HOH B 81 539 559 HOH HOH . 
G 3 HOH B 82 540 560 HOH HOH . 
G 3 HOH B 83 541 561 HOH HOH . 
G 3 HOH B 84 542 562 HOH HOH . 
G 3 HOH B 85 543 564 HOH HOH . 
H 3 HOH C 1 459 8 HOH HOH . 
H 3 HOH C 2 460 11 HOH HOH . 
H 3 HOH C 3 461 30 HOH HOH . 
H 3 HOH C 4 462 43 HOH HOH . 
H 3 HOH C 5 463 48 HOH HOH . 
H 3 HOH C 6 464 51 HOH HOH . 
H 3 HOH C 7 465 68 HOH HOH . 
H 3 HOH C 8 466 75 HOH HOH . 
H 3 HOH C 9 467 89 HOH HOH . 
H 3 HOH C 10 468 131 HOH HOH . 
H 3 HOH C 11 469 144 HOH HOH . 
H 3 HOH C 12 470 155 HOH HOH . 
H 3 HOH C 13 471 164 HOH HOH . 
H 3 HOH C 14 472 172 HOH HOH . 
H 3 HOH C 15 473 197 HOH HOH . 
H 3 HOH C 16 474 270 HOH HOH . 
H 3 HOH C 17 475 336 HOH HOH . 
H 3 HOH C 18 476 348 HOH HOH . 
H 3 HOH C 19 477 351 HOH HOH . 
H 3 HOH C 20 478 356 HOH HOH . 
H 3 HOH C 21 479 362 HOH HOH . 
H 3 HOH C 22 480 370 HOH HOH . 
H 3 HOH C 23 481 373 HOH HOH . 
H 3 HOH C 24 482 381 HOH HOH . 
H 3 HOH C 25 483 386 HOH HOH . 
H 3 HOH C 26 484 389 HOH HOH . 
H 3 HOH C 27 485 392 HOH HOH . 
H 3 HOH C 28 486 401 HOH HOH . 
H 3 HOH C 29 487 413 HOH HOH . 
H 3 HOH C 30 488 415 HOH HOH . 
H 3 HOH C 31 489 417 HOH HOH . 
H 3 HOH C 32 490 418 HOH HOH . 
H 3 HOH C 33 491 430 HOH HOH . 
H 3 HOH C 34 492 438 HOH HOH . 
H 3 HOH C 35 493 441 HOH HOH . 
H 3 HOH C 36 494 442 HOH HOH . 
H 3 HOH C 37 495 445 HOH HOH . 
H 3 HOH C 38 496 446 HOH HOH . 
H 3 HOH C 39 497 452 HOH HOH . 
H 3 HOH C 40 498 455 HOH HOH . 
H 3 HOH C 41 499 467 HOH HOH . 
H 3 HOH C 42 500 470 HOH HOH . 
H 3 HOH C 43 501 478 HOH HOH . 
H 3 HOH C 44 502 479 HOH HOH . 
H 3 HOH C 45 503 488 HOH HOH . 
H 3 HOH C 46 504 511 HOH HOH . 
H 3 HOH C 47 505 516 HOH HOH . 
H 3 HOH C 48 506 531 HOH HOH . 
H 3 HOH C 49 507 534 HOH HOH . 
H 3 HOH C 50 508 539 HOH HOH . 
H 3 HOH C 51 509 551 HOH HOH . 
H 3 HOH C 52 510 554 HOH HOH . 
H 3 HOH C 53 511 558 HOH HOH . 
I 3 HOH D 1 459 19 HOH HOH . 
I 3 HOH D 2 460 42 HOH HOH . 
I 3 HOH D 3 461 62 HOH HOH . 
I 3 HOH D 4 462 63 HOH HOH . 
I 3 HOH D 5 463 77 HOH HOH . 
I 3 HOH D 6 464 79 HOH HOH . 
I 3 HOH D 7 465 83 HOH HOH . 
I 3 HOH D 8 466 85 HOH HOH . 
I 3 HOH D 9 467 91 HOH HOH . 
I 3 HOH D 10 468 111 HOH HOH . 
I 3 HOH D 11 469 113 HOH HOH . 
I 3 HOH D 12 470 127 HOH HOH . 
I 3 HOH D 13 471 134 HOH HOH . 
I 3 HOH D 14 472 139 HOH HOH . 
I 3 HOH D 15 473 141 HOH HOH . 
I 3 HOH D 16 474 152 HOH HOH . 
I 3 HOH D 17 475 170 HOH HOH . 
I 3 HOH D 18 476 181 HOH HOH . 
I 3 HOH D 19 477 267 HOH HOH . 
I 3 HOH D 20 478 278 HOH HOH . 
I 3 HOH D 21 479 360 HOH HOH . 
I 3 HOH D 22 480 361 HOH HOH . 
I 3 HOH D 23 481 368 HOH HOH . 
I 3 HOH D 24 482 377 HOH HOH . 
I 3 HOH D 25 483 398 HOH HOH . 
I 3 HOH D 26 484 420 HOH HOH . 
I 3 HOH D 27 485 421 HOH HOH . 
I 3 HOH D 28 486 425 HOH HOH . 
I 3 HOH D 29 487 431 HOH HOH . 
I 3 HOH D 30 488 443 HOH HOH . 
I 3 HOH D 31 489 460 HOH HOH . 
I 3 HOH D 32 490 465 HOH HOH . 
I 3 HOH D 33 491 474 HOH HOH . 
I 3 HOH D 34 492 486 HOH HOH . 
I 3 HOH D 35 493 500 HOH HOH . 
I 3 HOH D 36 494 501 HOH HOH . 
I 3 HOH D 37 495 517 HOH HOH . 
I 3 HOH D 38 496 522 HOH HOH . 
I 3 HOH D 39 497 523 HOH HOH . 
I 3 HOH D 40 498 535 HOH HOH . 
I 3 HOH D 41 499 550 HOH HOH . 
I 3 HOH D 42 500 555 HOH HOH . 
I 3 HOH D 43 501 557 HOH HOH . 
I 3 HOH D 44 502 565 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               14.517 
_atom_site.Cartn_y               18.442 
_atom_site.Cartn_z               -6.983 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        55.5 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           600 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#