data_2GSW
#
_model_server_result.job_id            9CSERPYtp4jH39Vxg7zOjg 
_model_server_result.datetime_utc      '2024-11-16 08:41:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2gsw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":202}' 
#
_entry.id    2GSW 
#
_exptl.entry_id    2GSW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.34 
_cell.angle_gamma         90 
_cell.entry_id            2GSW 
_cell.length_a            52.444 
_cell.length_b            99.296 
_cell.length_c            69.436 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2GSW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G,I,K 1 1 
B,D,F,H,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C MSE 3 A MSE 3 1_555 A N LEU 4 A LEU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C GLY 77 A GLY 77 1_555 A N MSE 78 A MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 A C MSE 78 A MSE 78 1_555 A N SER 79 A SER 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale4 A C ASN 117 A ASN 117 1_555 A N MSE 118 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale5 A C MSE 118 A MSE 118 1_555 A N ARG 119 A ARG 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale6 A C VAL 121 A VAL 121 1_555 A N MSE 122 A MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale7 A C MSE 122 A MSE 122 1_555 A N ARG 123 A ARG 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale8 A C SER 164 A SER 164 1_555 A N MSE 165 A MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 A C MSE 165 A MSE 165 1_555 A N PHE 166 A PHE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 B C MSE 3 B MSE 3 1_555 B N LEU 4 B LEU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale11 B C GLY 77 B GLY 77 1_555 B N MSE 78 B MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale12 B C MSE 78 B MSE 78 1_555 B N SER 79 B SER 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale13 B C ASN 117 B ASN 117 1_555 B N MSE 118 B MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale14 B C MSE 118 B MSE 118 1_555 B N ARG 119 B ARG 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? 
covale ? covale15 B C VAL 121 B VAL 121 1_555 B N MSE 122 B MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale16 B C MSE 122 B MSE 122 1_555 B N ARG 123 B ARG 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale17 B C SER 164 B SER 164 1_555 B N MSE 165 B MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale18 B C MSE 165 B MSE 165 1_555 B N PHE 166 B PHE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale19 C C MSE 3 C MSE 3 1_555 C N LEU 4 C LEU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 C C GLY 77 C GLY 77 1_555 C N MSE 78 C MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale21 C C MSE 78 C MSE 78 1_555 C N SER 79 C SER 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale22 C C ASN 117 C ASN 117 1_555 C N MSE 118 C MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale23 C C MSE 118 C MSE 118 1_555 C N ARG 119 C ARG 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? 
covale ? covale24 C C VAL 121 C VAL 121 1_555 C N MSE 122 C MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale25 C C MSE 122 C MSE 122 1_555 C N ARG 123 C ARG 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale26 C C SER 164 C SER 164 1_555 C N MSE 165 C MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale27 C C MSE 165 C MSE 165 1_555 C N PHE 166 C PHE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale28 D C MSE 3 D MSE 3 1_555 D N LEU 4 D LEU 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale29 D C GLY 77 D GLY 77 1_555 D N MSE 78 D MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale30 D C MSE 78 D MSE 78 1_555 D N SER 79 D SER 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale31 D C ASN 117 D ASN 117 1_555 D N MSE 118 D MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale32 D C MSE 118 D MSE 118 1_555 D N ARG 119 D ARG 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale33 D C VAL 121 D VAL 121 1_555 D N MSE 122 D MSE 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale34 D C MSE 122 D MSE 122 1_555 D N ARG 123 D ARG 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale35 D C SER 164 D SER 164 1_555 D N MSE 165 D MSE 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale36 D C MSE 165 D MSE 165 1_555 D N PHE 166 D PHE 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 70 n n 
N1 C10 FMN doub 71 n n 
C2 O2 FMN doub 72 n n 
C2 N3 FMN sing 73 n n 
N3 C4 FMN sing 74 n n 
N3 HN3 FMN sing 75 n n 
C4 O4 FMN doub 76 n n 
C4 C4A FMN sing 77 n n 
C4A N5 FMN doub 78 n n 
C4A C10 FMN sing 79 n n 
N5 C5A FMN sing 80 n n 
C5A C6 FMN doub 81 n y 
C5A C9A FMN sing 82 n y 
C6 C7 FMN sing 83 n y 
C6 H6 FMN sing 84 n n 
C7 C7M FMN sing 85 n n 
C7 C8 FMN doub 86 n y 
C7M HM71 FMN sing 87 n n 
C7M HM72 FMN sing 88 n n 
C7M HM73 FMN sing 89 n n 
C8 C8M FMN sing 90 n n 
C8 C9 FMN sing 91 n y 
C8M HM81 FMN sing 92 n n 
C8M HM82 FMN sing 93 n n 
C8M HM83 FMN sing 94 n n 
C9 C9A FMN doub 95 n y 
C9 H9 FMN sing 96 n n 
C9A N10 FMN sing 97 n n 
N10 C10 FMN sing 98 n n 
N10 C1' FMN sing 99 n n 
C1' C2' FMN sing 100 n n 
C1' "H1'1" FMN sing 101 n n 
C1' "H1'2" FMN sing 102 n n 
C2' O2' FMN sing 103 n n 
C2' C3' FMN sing 104 n n 
C2' H2' FMN sing 105 n n 
O2' HO2' FMN sing 106 n n 
C3' O3' FMN sing 107 n n 
C3' C4' FMN sing 108 n n 
C3' H3' FMN sing 109 n n 
O3' HO3' FMN sing 110 n n 
C4' O4' FMN sing 111 n n 
C4' C5' FMN sing 112 n n 
C4' H4' FMN sing 113 n n 
O4' HO4' FMN sing 114 n n 
C5' O5' FMN sing 115 n n 
C5' "H5'1" FMN sing 116 n n 
C5' "H5'2" FMN sing 117 n n 
O5' P FMN sing 118 n n 
P O1P FMN doub 119 n n 
P O2P FMN sing 120 n n 
P O3P FMN sing 121 n n 
O2P HOP2 FMN sing 122 n n 
O3P HOP3 FMN sing 123 n n 
#
_atom_sites.entry_id                     2GSW 
_atom_sites.fract_transf_matrix[1][1]    0.019068 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004522 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010071 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014801 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FMN A 1 201 201 FMN FMN . 
F 2 FMN B 1 202 201 FMN FMN . 
G 2 FMN C 1 203 201 FMN FMN . 
H 2 FMN D 1 204 201 FMN FMN . 
I 3 HOH A 1 202 1 HOH HOH . 
I 3 HOH A 2 203 2 HOH HOH . 
I 3 HOH A 3 204 3 HOH HOH . 
I 3 HOH A 4 205 4 HOH HOH . 
I 3 HOH A 5 206 5 HOH HOH . 
I 3 HOH A 6 207 6 HOH HOH . 
I 3 HOH A 7 208 7 HOH HOH . 
I 3 HOH A 8 209 8 HOH HOH . 
I 3 HOH A 9 210 9 HOH HOH . 
J 3 HOH B 1 203 14 HOH HOH . 
J 3 HOH B 2 204 15 HOH HOH . 
J 3 HOH B 3 205 16 HOH HOH . 
J 3 HOH B 4 206 17 HOH HOH . 
J 3 HOH B 5 207 27 HOH HOH . 
K 3 HOH C 1 204 12 HOH HOH . 
K 3 HOH C 2 205 13 HOH HOH . 
K 3 HOH C 3 206 18 HOH HOH . 
K 3 HOH C 4 207 19 HOH HOH . 
K 3 HOH C 5 208 20 HOH HOH . 
K 3 HOH C 6 209 21 HOH HOH . 
K 3 HOH C 7 210 22 HOH HOH . 
K 3 HOH C 8 211 23 HOH HOH . 
K 3 HOH C 9 212 24 HOH HOH . 
K 3 HOH C 10 213 25 HOH HOH . 
K 3 HOH C 11 214 26 HOH HOH . 
K 3 HOH C 12 215 34 HOH HOH . 
K 3 HOH C 13 216 35 HOH HOH . 
L 3 HOH D 1 205 10 HOH HOH . 
L 3 HOH D 2 206 11 HOH HOH . 
L 3 HOH D 3 207 28 HOH HOH . 
L 3 HOH D 4 208 29 HOH HOH . 
L 3 HOH D 5 209 30 HOH HOH . 
L 3 HOH D 6 210 31 HOH HOH . 
L 3 HOH D 7 211 32 HOH HOH . 
L 3 HOH D 8 212 33 HOH HOH . 
L 3 HOH D 9 213 36 HOH HOH . 
L 3 HOH D 10 214 37 HOH HOH . 
L 3 HOH D 11 215 38 HOH HOH . 
L 3 HOH D 12 216 39 HOH HOH . 
L 3 HOH D 13 217 40 HOH HOH . 
L 3 HOH D 14 218 41 HOH HOH . 
L 3 HOH D 15 219 42 HOH HOH . 
L 3 HOH D 16 220 43 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . F 2 20.409 2.131 11.243 1 96.95 ? N1 FMN 202 B 1 
HETATM 2 C C2 FMN . . . F 2 20.192 2.156 12.584 1 97.13 ? C2 FMN 202 B 1 
HETATM 3 O O2 FMN . . . F 2 20.822 1.568 13.476 1 96.53 ? O2 FMN 202 B 1 
HETATM 4 N N3 FMN . . . F 2 19.043 3.001 13.082 1 97.62 ? N3 FMN 202 B 1 
HETATM 5 C C4 FMN . . . F 2 18.169 3.773 12.193 1 97.27 ? C4 FMN 202 B 1 
HETATM 6 O O4 FMN . . . F 2 17.265 4.42 12.765 1 96.51 ? O4 FMN 202 B 1 
HETATM 7 C C4A FMN . . . F 2 18.457 3.693 10.83 1 97.19 ? C4A FMN 202 B 1 
HETATM 8 N N5 FMN . . . F 2 17.696 4.368 9.985 1 96.64 ? N5 FMN 202 B 1 
HETATM 9 C C5A FMN . . . F 2 17.924 4.328 8.568 1 96.32 ? C5A FMN 202 B 1 
HETATM 10 C C6 FMN . . . F 2 17.117 5.051 7.617 1 96.01 ? C6 FMN 202 B 1 
HETATM 11 C C7 FMN . . . F 2 17.399 4.968 6.163 1 96.41 ? C7 FMN 202 B 1 
HETATM 12 C C7M FMN . . . F 2 16.377 5.832 5.41 1 96.7 ? C7M FMN 202 B 1 
HETATM 13 C C8 FMN . . . F 2 18.527 4.146 5.665 1 96.56 ? C8 FMN 202 B 1 
HETATM 14 C C8M FMN . . . F 2 18.797 4.07 4.214 1 96.55 ? C8M FMN 202 B 1 
HETATM 15 C C9 FMN . . . F 2 19.322 3.44 6.573 1 96.8 ? C9 FMN 202 B 1 
HETATM 16 C C9A FMN . . . F 2 19.092 3.479 8.083 1 96.65 ? C9A FMN 202 B 1 
HETATM 17 N N10 FMN . . . F 2 19.957 2.718 8.946 1 96.32 ? N10 FMN 202 B 1 
HETATM 18 C C10 FMN . . . F 2 19.664 2.805 10.318 1 96.95 ? C10 FMN 202 B 1 
HETATM 19 C C1' FMN . . . F 2 21.102 1.878 8.495 1 94.93 ? C1' FMN 202 B 1 
HETATM 20 C C2' FMN . . . F 2 20.799 0.403 8.291 1 93.95 ? C2' FMN 202 B 1 
HETATM 21 O O2' FMN . . . F 2 20.398 -0.18 9.511 1 94.38 ? O2' FMN 202 B 1 
HETATM 22 C C3' FMN . . . F 2 22.033 -0.237 7.807 1 93.16 ? C3' FMN 202 B 1 
HETATM 23 O O3' FMN . . . F 2 22.193 0.163 6.404 1 92.05 ? O3' FMN 202 B 1 
HETATM 24 C C4' FMN . . . F 2 22.064 -1.789 7.743 1 93.12 ? C4' FMN 202 B 1 
HETATM 25 O O4' FMN . . . F 2 23.313 -2.23 7.263 1 94.87 ? O4' FMN 202 B 1 
HETATM 26 C C5' FMN . . . F 2 20.946 -2.46 6.865 1 92.11 ? C5' FMN 202 B 1 
HETATM 27 O O5' FMN . . . F 2 21.279 -2.163 5.484 1 90.14 ? O5' FMN 202 B 1 
HETATM 28 P P FMN . . . F 2 20.351 -2.724 4.374 1 88.13 ? P FMN 202 B 1 
HETATM 29 O O1P FMN . . . F 2 21.014 -2.199 3.094 1 88.32 ? O1P FMN 202 B 1 
HETATM 30 O O2P FMN . . . F 2 20.37 -4.205 4.426 1 87.64 ? O2P FMN 202 B 1 
HETATM 31 O O3P FMN . . . F 2 18.956 -2.126 4.506 1 90.14 ? O3P FMN 202 B 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#